Llun026855.1
Basic Information
- Insect
- Lordithon lunulatus
- Gene Symbol
- lrrfip2
- Assembly
- GCA_963942505.1
- Location
- OZ012671.1:18662083-18670760[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-107 1.1e-102 344.9 33.4 1 300 55 346 55 346 0.94 2 2 0.0037 1.8e+02 2.6 0.6 120 162 344 386 343 399 0.89
Sequence Information
- Coding Sequence
- ATGCGAGTGTGTGAGTGTGATTGTGAATGCGAGTGTGAATGCGAGTGCGAGTGTGAATGTGAGTGCGAGTGTGAATGTGAGTGCGAGTGTGAATGCGAGTGTGAGTGCGAGTGTGAGTGCGAGTGTGAGTGCGAGTGTGAGTGCGAGTGTGAGTGCGAGTGCgcGGAAGCGCGTCTGTTGGCTCGGCGAGCGGCCCGTGCTGAAGCACGCGAGATACGAATGCGAGATCTGGAGCGGCAGCAGCGCGAACAGGAGGAAAACGCGGATCGACAGTTCGACATGCTGGCGGAACCAATAATCAGGCGGCCGGCTACTACCTCTAGGTATCTGTCCAGCCGCCGATCGTCGGAGGACTCGTTGGAGGACACGGGCAGTCTCAGGGACCTAAGGCATGAGCTCAAGGAGGTGGAGGAGAAGTTCCGCAAGGCTATGATAGCCAATGCACAGCTGGACAATGATAAAGCCGCACAAACTTACCAACTGGAGCTCCTCAAAGACAGattggAGGAGTTGGAAGAAGAGCACTCACAGCTGAAACGTGAACATAGAGACAAATGCAGAGACTGTGAACAGTTGAAACGTCTGACGGTGCAACTGAAAGAAGATCTAGCCGTAATGAAGGCGGAGTTAGAGGATAGAGATAGACTAATATTAGAAAAAGGTCTTGTGATCGTTGGGGAGGAAGAAGAAATTTCCGCGGAACAGAATGGTGATGGCCTTACGAATGGCCCGACAAAAGTGAGACGAGCGCTGGTTAGTGCAGAAAACGCTCAGTTCCTTGCAAATACCGGGGAAGGAAGTTTAGATGTACGATTGGCAAAATTTTCTAAAGAACGAGGTGAACTGCAAGATCAGATTAGTCatttaaaattagaattagaagaagagaagaatagGCGAAGAAAGCACAGTGGTTCCACATTGAATGGCCCCAATTATGACTCGGACTACGATGCTGCAGATGTGCaaaGAGAAGCGACAAAACAATTAGCAGAGTTTAAATTTAGGGCCCAAAAAGCCGAGCAAGATGTGGCTACATTACAGGCAACTGTAGCACGGCTGGAAAGTCAAGTAATCCGATACAAATCCGCCGCTGAGATTTCAGAGAAGTCAGAAGAGGCACTAAAGGCGGAAAAGCGGAAATTACAACGAGAGgACACTCTTAGTAGTTCTAGTAGCTTTGATGATACCAATAACGATAGCGATGTAGAAATTAGCACTGATGAAGGTAGCATAACATAA
- Protein Sequence
- MRVCECDCECECECECECECECECECECECECECECECECECECECECECECECAEARLLARRAARAEAREIRMRDLERQQREQEENADRQFDMLAEPIIRRPATTSRYLSSRRSSEDSLEDTGSLRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEEHSQLKREHRDKCRDCEQLKRLTVQLKEDLAVMKAELEDRDRLILEKGLVIVGEEEEISAEQNGDGLTNGPTKVRRALVSAENAQFLANTGEGSLDVRLAKFSKERGELQDQISHLKLELEEEKNRRRKHSGSTLNGPNYDSDYDAADVQREATKQLAEFKFRAQKAEQDVATLQATVARLESQVIRYKSAAEISEKSEEALKAEKRKLQREDTLSSSSSFDDTNNDSDVEISTDEGSIT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- -
- 80% Identity
- -