Lmom012743.1
Basic Information
- Insect
- Lordiphosa mommai
- Gene Symbol
- Bro
- Assembly
- GCA_018904225.1
- Location
- JAEIFT010000026.1:1174534-1175169[+]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-74 4.8e-70 234.6 1.0 1 153 36 184 36 193 0.96
Sequence Information
- Coding Sequence
- ATGCATCATCATCATCAGAATCTGGGCGATCCTTCGGGCATGCTGCCGCCGCCTTACGAAACCATGGCTTTATACGAACAACCCAAACCCCGGTTTATTTTCAAAATGCCACGCGTAGTACCAGATCAAAAATCCAAATACGAAAGCGATGAACTATTTCGGCGTCTTGGGCGCGAGAGCGAGGTACGCTATACTGGCTATCGGGAACGCTCCATAGATGAGCGTCGTATGCGTTTTGTCAACGATTGTCGTAAGGGTTATGCTGAGCTCTCATTTGTGGCTTCGGGCACCAATATTCAGCTCTATTTTAATGCCAATCACAATCCCTATGCCCAGGAGCAGGAATGTGATTTTGAGAGAGAACAGGGTAAAGTCCATTTACGTTCCAATTTTATAATGAATGGCGTTTGTGTGCGTTTTCGTGGTTGGTTGGACTTGAATCGTCTGGATGGAGTAGCCAGTCTGGAGTATGATGAAGGACGTGCCCTGCAGGAGGATGCACAGTTGCGTGAACAAGTTGAGAGTTACAATCAACGAATGGCGGAATCAAAACGTATTTATGCCCATACACCGCCCGAGGATCCCATACGTCGTTTAGGACCTGGACATCCGCCTGGAGGGCCAATGGGTTGGTAG
- Protein Sequence
- MHHHHQNLGDPSGMLPPPYETMALYEQPKPRFIFKMPRVVPDQKSKYESDELFRRLGRESEVRYTGYRERSIDERRMRFVNDCRKGYAELSFVASGTNIQLYFNANHNPYAQEQECDFEREQGKVHLRSNFIMNGVCVRFRGWLDLNRLDGVASLEYDEGRALQEDAQLREQVESYNQRMAESKRIYAHTPPEDPIRRLGPGHPPGGPMGW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00580451; iTF_00517475; iTF_00480644; iTF_00473544; iTF_00550026; iTF_00603114; iTF_00563660; iTF_00471373; iTF_00574574; iTF_00535823; iTF_00484208; iTF_00503761; iTF_00614676; iTF_00600821; iTF_00477110; iTF_00615350; iTF_00611160; iTF_00475709; iTF_00487070; iTF_00514654; iTF_00474272; iTF_00579752; iTF_00481317; iTF_00545735; iTF_00538729; iTF_00487772; iTF_00565854; iTF_00914259; iTF_00919629; iTF_00915988; iTF_00916956; iTF_00917824;
- 90% Identity
- iTF_00916956; iTF_00919629; iTF_00914259; iTF_00915091; iTF_00915988; iTF_00917824;
- 80% Identity
- -