g15561.t1
Basic Information
- Insect
- Drosophila pseudoobscura
- Gene Symbol
- Bro
- Assembly
- GCA_009870125.2
- Location
- CM020872.1:50794075-50794716[-]
Transcription Factor Domain
- TF Family
- CBF
- Domain
- CBF_beta domain
- PFAM
- PF02312
- TF Group
- Beta-Scaffold Factors
- Description
- Core binding factor (CBF) is a heterodimeric transcription factor essential for genetic regulation of hematopoiesis and osteogenesis. The beta subunit enhances DNA-binding ability of the alpha subunit in vitro, and has been show to have a structure related to the OB fold [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.2e-73 9.2e-69 230.5 1.4 1 152 37 184 37 192 0.97
Sequence Information
- Coding Sequence
- ATGCATCACCATCAAAATCTAGGAGACGCAGCTGCCATGCCGGGCATGCTTCCGCCATATGAAGCAATGGCGATGTACGAGCAACCCAAGCCCCGCTTCATCTTCAAAATGCCCCGAGTTGTGCCCGATCAGAAATCAAAGTACGATAGCGATGAGCTGTTCCGGCGTCTTTGTCGAGAGACCGAGGTTCGCTATACTGGATACAGGGAGCGTGCCATAGACGAGCGACGCATGAGATTTGTCAACGACTGCCGGAAGGGCTATGCGGAGCTCTCCTTTGTCACATCGGGCACCAACGTCCAGCTCTACTTCAATGCCAACCACAATCCCTATGCCCAGGACCAGGAGTGCGACTTTGAGCGGGAGCGCGGAAAAGTGCATCTCCGCTCTCATTTCATTATGAACGGAGTTTGTGTGCGCTTCCGCGGCTGGGTGGATCTGGATCGATTGGACGGCGTCGCCACACTGGAGTTTGACGAGGGGCGCGCCCTGCAGGAAGATGTCCAGCTGCGGGAACAGATCGAGAGCTACAACCAACGCATGAACGAATCGAAGCGCATCTATCCCGTACCTCACACGCCTCCCGAGGACCACATTCGGCGTGGCGGACCCGGGATGCCGGGTGGACCGATGGGATGGTAG
- Protein Sequence
- MHHHQNLGDAAAMPGMLPPYEAMAMYEQPKPRFIFKMPRVVPDQKSKYDSDELFRRLCRETEVRYTGYRERAIDERRMRFVNDCRKGYAELSFVTSGTNVQLYFNANHNPYAQDQECDFERERGKVHLRSHFIMNGVCVRFRGWVDLDRLDGVATLEFDEGRALQEDVQLREQIESYNQRMNESKRIYPVPHTPPEDHIRRGGPGMPGGPMGW*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00918809;
- 90% Identity
- iTF_00517475; iTF_00480644; iTF_00473544; iTF_00603114; iTF_00563660; iTF_00471373; iTF_00574574; iTF_00535823; iTF_00484208; iTF_00600821; iTF_00611160; iTF_00487070; iTF_00514654; iTF_00474272;
- 80% Identity
- iTF_00574574;