Lmag015000.1
Basic Information
- Insect
- Lordiphosa magnipectinata
- Gene Symbol
- nfxl1
- Assembly
- GCA_018904285.1
- Location
- JBAMBO010002434.1:11556-21669[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.53 7.7e+03 -2.3 0.6 15 18 89 92 88 93 0.81 2 20 2 2.9e+04 -8.1 6.4 15 19 146 150 145 150 0.82 3 20 0.13 1.8e+03 -0.3 0.4 4 10 181 187 180 187 0.95 4 20 6.4e-08 0.00094 19.8 15.5 1 18 195 211 195 212 0.98 5 20 6.2e-08 0.0009 19.9 17.5 1 19 248 267 248 267 0.97 6 20 0.45 6.6e+03 -2.0 1.0 5 10 291 296 291 296 0.93 7 20 7.6e-06 0.11 13.2 14.9 1 19 302 323 302 323 0.88 8 20 0.88 1.3e+04 -3.0 0.5 1 7 347 352 346 354 0.49 9 20 8.3e-08 0.0012 19.5 12.2 1 18 357 374 357 375 0.96 10 20 0.69 1e+04 -2.6 0.4 1 5 384 388 384 393 0.73 11 20 2 2.9e+04 -4.9 2.3 5 10 398 403 398 403 0.91 12 20 0.0044 64 4.4 19.2 1 18 409 426 409 427 0.97 13 20 3.3e-08 0.00048 20.8 14.7 1 19 436 454 430 454 0.90 14 20 0.56 8.1e+03 -2.3 1.2 8 13 490 495 489 495 0.82 15 20 0.00015 2.2 9.0 8.6 9 18 499 508 497 509 0.91 16 20 0.014 2e+02 2.8 6.6 1 12 521 531 521 531 0.96 17 20 0.85 1.2e+04 -2.9 1.4 6 10 580 584 579 584 0.88 18 20 1.4e-05 0.2 12.4 5.2 1 11 590 600 590 601 0.96 19 20 0.093 1.4e+03 0.1 19.1 3 18 630 645 629 646 0.91 20 20 1.8e-06 0.026 15.2 10.9 1 16 697 711 697 717 0.92
Sequence Information
- Coding Sequence
- atgcaaaaattcaaTCAAGCTCAAGCCAAAAATATGGCAGCTGCCCAAAAGCTGGTAGATGCCTATGCCTCCAGCTCAGAAGATGAAGGTGAACTGGATGAGAAACATATTTTGGATCTGCTCTACAAGCACTATAAGCCCAACTCGGACACTTCCTCCTATGCGGGACGCACTGCCACCTTTCTTGAAAACACTCTCCACTCGGGTGCAGCCACTTGTCTCATCTGCATTGGCAGCATACGACGCGTAGAGTCCATTTGGTCATGTCAATCATGCTATTGCTTCTTCCATTTGAACTGCATCCAGCGTTGGGCCAATGACAGTCTCATGCAGATGAAGGTGAAGGCAGAACAGCAGCAAAATGGTCATCAGGGACACTATAATCATTTGGGTGAATTTGTGCCAGCAAAACGACCAAAATCCTTACACTGGTGCTGTCCGCAGTGCCGTAAGGATTATACGCCCACCGAACGTCCCACCAAATACGAATGCTTCTGTGGCAAAGAAGTGAATCCTGCAGCGCAGCCCTTTTTGGTGCCACATTCATGCGGAGAGATTTGTGGTAAGCTGCTGCAACCCAAATGCGGTCATGACTGCAAACTGTTGTGTCATCCCGGGCCCTGTCCACCCTGTGCCCAGCAGGCGCAAATCTCCTGCCTGTGTGGGAAATCTTCACCACGTCCCATGCGCTGCATAGACAAGCAATGGCAGTGCCAAGTCAAGTGTAATCAGCTATTGGCCTGTGGCAAACACAAATGTAATCAAAAATGTCATCGACCTGGACAGTGTCCGCCCTGCACCAGCCAGAGTAGTCAGCCCTGTGAGTGTGGAAGAGAGAAGAAGCTGGTCAATTGCTCCGATCGCAAATGGAAGTGCCAAAATATTTGCGGAGCTTTATTTGCCTGTGGCCTGCACTCATGCGAGCAAGTGTGCCATAAGGGTGGTCCCTGTGGCGGCGCTGAGTGTCCCTTGGTTGAACGCAGCTGCCCTTGCGGCAAGAATATTCAATCTAAGGCCTGCACTGAAGCAGTGGAAACCTGTGGTGATACCTGCCAGAAGCTATTGTCTTGCGGCCAACACAGCTGCGCCCAACGCTGTCATCGTGGACCCTGCAATTTGTGCCTGGTGAGAACGAAAAAGAAATGTCGCTGTGGTCTGCATGAAAAGGAACTGCCCTGTTCCAAGGAATTCACCTGTGAGaccaaatgcaaacaaatgCGTGATTGTGGCAAACATGGCTGCAATCGCAAATGCTGTGGGGATCAGTGTCCGCCCTGTGAGAAGATCTGTGGCAAGCAATTGAGTTGCAACAAGCATAAATGTCAGTCTGTGTGCCACAATGGTCCTTGCTATCCCTGCAAAATGGAATCCCAGGTCAATTGTCGTTGTGGCAAAACCAAACGAAGTGTTCCCTGCGGTAGGGAGAGAAGTGCACGCATAGTTTGCCTGGAGCTGTGCAGAATTTCATCGAAATGTCATCATGGTGTCAAACATCGTTGTCACAAAGGCGAGTGTCCGCCCTGTGGTCAGGTGTGTGGTCTGCCCAACCTGGCCAGTGGTTGTGGACACATTTGTAAGGCTCGCTGTCATGAAGCCATTAGAGTAAACAAACCGCAAGCCAAAAAGTATGAATACAAATCACTGCCACATCCACGCTGTGAGGAGGGCATCAGTGTCACTTGCATAGGCGGTCACGAGGTAGCCACCTGGCCTTGCTGGAACTCCAAACCCACTTCGTGTCAGCGTAAATGCAATCGAAACTTGAAATGTGGCAATCATCAATGTTCCTTAGTCTGTCATGCTGTGCCCAATTTGTTGGACATGCAACAGCAACCAGGCTGTGCCAACTGTACAGAAGGCTGTGCCATACCAAGACCCACTGGCTGTACACATGCCTGCCCCAAAGCCTGTCATCCGCCTCCCTGCAATCCCTgtcattttgttttcaaaaccaAATGCCATTGTGAACTCAACCAGTTGGTGTACAAATGCAGCGATTACTTTGATGAATCAGGCACGGTGCAGCAAATACTCGAGCGCAGGGAAAAACAACGCAGCTGCGGCAATCGTTGTTTGAAAAATTTCCCTTGCGGTCATCGCTGCCTTGCCATTTGCCACCCGGGCAAATGTCCCAATCCCGAATTATGCCGCAAAAAAGTGCGCATATTTTGCTCTTGTAAGAGAATCAAACAGGAGATAGCCTGTGACAAGGTTAGAGCAGGACAAACTCAACTCGATTGCGGTACCCTCTGTGAGTTGGAGCATTCTAAGGCAGCTGCTGCGGAACGGGAACAGGTGGAGCACAAGCGACGCTTGGAGGAGGAAAAGAATCGGCTGGAGTTGgagaaatttcaacaaaagtttgCCAAACGCAAGCATAAAGAACGCAAAACTATGGACATAGAACGTACTCAACGGAAAATCAATTGGCAAAAAGTGGCCATCTATTCTGTATCTCTAGTGGCCATATTTGGTGCACTGGCTGTAGCTTACTATGCTGAGAGTTAG
- Protein Sequence
- MQKFNQAQAKNMAAAQKLVDAYASSSEDEGELDEKHILDLLYKHYKPNSDTSSYAGRTATFLENTLHSGAATCLICIGSIRRVESIWSCQSCYCFFHLNCIQRWANDSLMQMKVKAEQQQNGHQGHYNHLGEFVPAKRPKSLHWCCPQCRKDYTPTERPTKYECFCGKEVNPAAQPFLVPHSCGEICGKLLQPKCGHDCKLLCHPGPCPPCAQQAQISCLCGKSSPRPMRCIDKQWQCQVKCNQLLACGKHKCNQKCHRPGQCPPCTSQSSQPCECGREKKLVNCSDRKWKCQNICGALFACGLHSCEQVCHKGGPCGGAECPLVERSCPCGKNIQSKACTEAVETCGDTCQKLLSCGQHSCAQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFTCETKCKQMRDCGKHGCNRKCCGDQCPPCEKICGKQLSCNKHKCQSVCHNGPCYPCKMESQVNCRCGKTKRSVPCGRERSARIVCLELCRISSKCHHGVKHRCHKGECPPCGQVCGLPNLASGCGHICKARCHEAIRVNKPQAKKYEYKSLPHPRCEEGISVTCIGGHEVATWPCWNSKPTSCQRKCNRNLKCGNHQCSLVCHAVPNLLDMQQQPGCANCTEGCAIPRPTGCTHACPKACHPPPCNPCHFVFKTKCHCELNQLVYKCSDYFDESGTVQQILERREKQRSCGNRCLKNFPCGHRCLAICHPGKCPNPELCRKKVRIFCSCKRIKQEIACDKVRAGQTQLDCGTLCELEHSKAAAAEREQVEHKRRLEEEKNRLELEKFQQKFAKRKHKERKTMDIERTQRKINWQKVAIYSVSLVAIFGALAVAYYAES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00916869;
- 90% Identity
- iTF_00917729; iTF_00916869; iTF_00915000; iTF_00915903; iTF_00920342;
- 80% Identity
- -