Basic Information

Insect: Lordiphosa magnipectinata
Gene Symbol: -
Assembly: GCA_018904285.1
Location: JBAMBO010001134.1:355343-369099[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.6e-05 0.0027 18.7 2.1 1 23 229 251 229 251 0.97

2 18 1.2e-05 0.00088 20.3 0.4 1 23 257 279 257 279 0.97

3 18 0.0017 0.13 13.4 0.9 1 23 285 307 285 307 0.95

4 18 2.5e-05 0.0019 19.2 3.1 1 23 313 335 313 335 0.97

5 18 5.7e-05 0.0042 18.1 4.7 1 23 341 363 341 363 0.99

6 18 0.0001 0.0078 17.3 5.7 1 23 369 391 369 391 0.97

7 18 5.1e-07 3.8e-05 24.6 4.3 1 23 397 419 397 419 0.98

8 18 1.8e-07 1.4e-05 26.0 2.4 1 23 425 447 425 447 0.97

9 18 0.00011 0.0079 17.3 6.7 1 23 454 476 454 476 0.97

10 18 0.00018 0.014 16.5 6.5 1 23 482 504 482 504 0.98

11 18 1.6e-05 0.0012 19.8 4.5 1 23 510 532 510 532 0.98

12 18 1.2e-05 0.00089 20.2 8.1 1 23 538 560 538 560 0.98

13 18 9.7e-06 0.00073 20.5 7.6 1 23 566 588 566 588 0.97

14 18 1.1e-06 8.1e-05 23.5 7.7 1 23 594 616 594 616 0.98

15 18 0.00034 0.025 15.7 9.5 1 23 622 645 622 645 0.95

16 18 0.00012 0.009 17.1 0.9 1 23 651 673 651 673 0.98

17 18 0.0013 0.099 13.8 3.4 1 23 683 705 683 705 0.97

18 18 1.5e-05 0.0011 19.9 1.6 1 23 711 734 711 734 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.6e-05	0.0027	18.7	2.1	1	23	229	251	229	251	0.97
2	18	1.2e-05	0.00088	20.3	0.4	1	23	257	279	257	279	0.97
3	18	0.0017	0.13	13.4	0.9	1	23	285	307	285	307	0.95
4	18	2.5e-05	0.0019	19.2	3.1	1	23	313	335	313	335	0.97
5	18	5.7e-05	0.0042	18.1	4.7	1	23	341	363	341	363	0.99
6	18	0.0001	0.0078	17.3	5.7	1	23	369	391	369	391	0.97
7	18	5.1e-07	3.8e-05	24.6	4.3	1	23	397	419	397	419	0.98
8	18	1.8e-07	1.4e-05	26.0	2.4	1	23	425	447	425	447	0.97
9	18	0.00011	0.0079	17.3	6.7	1	23	454	476	454	476	0.97
10	18	0.00018	0.014	16.5	6.5	1	23	482	504	482	504	0.98
11	18	1.6e-05	0.0012	19.8	4.5	1	23	510	532	510	532	0.98
12	18	1.2e-05	0.00089	20.2	8.1	1	23	538	560	538	560	0.98
13	18	9.7e-06	0.00073	20.5	7.6	1	23	566	588	566	588	0.97
14	18	1.1e-06	8.1e-05	23.5	7.7	1	23	594	616	594	616	0.98
15	18	0.00034	0.025	15.7	9.5	1	23	622	645	622	645	0.95
16	18	0.00012	0.009	17.1	0.9	1	23	651	673	651	673	0.98
17	18	0.0013	0.099	13.8	3.4	1	23	683	705	683	705	0.97
18	18	1.5e-05	0.0011	19.9	1.6	1	23	711	734	711	734	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGCTCGGTTCCCTCGGTGGTCACACCGGTGGTAACTACTGGTGGTGGCACCACAATAACATTGGGCGGTGGCCCACCACCCTCATCATTGCCCAAATCAGAGATCAAAGAGGATGGCAAACCGCCTCATGGCATTGAAATGTATAAAGTGAACATTGAAGATATCTCCCAGCTGTTTACCTATCACGAAGTCTTTGGCAAAATCCATGGGGATGTTGTGAATCATCAATTGGCGGCGGCGGCACATGGTGGCCAGCTGCCACCGCCACCTCCGCTGCCGCCGCAGACGCATGCAACGAGtgcagcggcggcagcagccGCTGTTGCGGCCTCCACAAATAATGCGGCAGTTGCTGCAGTGATGGCGTCCGCGAAcgcagcggcggcggcagcagcagcagcctcggCAGCGGGGGTGGGGGTCGGCGGCGTGCCCTCAACCAGTGGGGGGGGACATATAGTCACAACGACCACGACCAGCTCCTCCACGGCCAGCAGTAGTGCAGGGAGTGCGGGGGCAGGCACTACAACAACCTCAACGGGTGAGTTGCTTATGCCTAAAATGGAGGGCGGCATACACGGCGTGGACGCTGGCGGCGGCAACGGCGGCCAGTCATCCCAGGTGACCCTGGCACCCGATGGTACGCCCATTGCCACTGGGACACATGTCTGCGATATTTGTGGGAAAATGTTCCAGTTTCGCTATCAGCTAATTGTCCACCGTCGCTATCACAGCGAACGCAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGGTTTACCACCTCGCAGGATCTGACGCGGCATGGCAAAATCCACATTGGCGGTCCCATGTTTACCTGCATCGTGTGCTTCAATGTGTTCGCCAACAACACCAGCCTGGAGCGGCATATGAAACGTCACTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCATCTGGACAATCATTTTCGTTCGCATACGGGTGAAACGCCATTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCATATGGTTAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTGTGCGGCAAGAAATACACGCGCAAGGAGCATCTAGCCAATCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACACGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCATACGGGCGAATCACCGCATCGCTGCTCCTACTGCATGAAGACCTTCACACGCAAGGAGCATCTGGTTAATCACATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACACGCAAGGAGCACTTGACGAATCATGTGCGCCAGCACACGGGCGACTCGCCGCATCGCTGCTCCTACTGCAAGAAGACGTTCACCCGGAAGGAGCATCTGACGAATCATGTGCGACTGCATACGGGCGACTCGCCGCACAAATGTGAATATTGCCAGAAGACGTTCACGCGGAAAGAGCATCTCAACAATCATATGCGTCAGCACTCCAGCGACAATCCGCACTGTTGCAATGTGTGCAATAAGCCGTTTACGCGCAAGGAGCATCTGATCAATCATATGTCACGCTGCCATACGGGCGATCGTCCATTTACATGCGAAACATGCGGGAAATCCTTTCCGCTTAAGGGCAATCTGTTGTTCCATCAGCGTAGCCATACGAAGGGACAGGAGTGCGAGCGCCCGTTTGCATGCGAAAAGTGCCCGaaaaattttatatgtaaagGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTATGCTGACGCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCACCACTCGACGACGACGATGCATACGATCCAACAGATCACAGCAGGAGCGGCCGGTGCCGGTGGAGGAGCAGTGCAGCTGACGCCCGGATTGGTACCATTAGTAACTTCCACACTGATATCCCATAATGCAGCTGCTGTGGCCCAACAGCAATCGCATAAGCAACAGGCGGCCGCTGCTGCAGCCGCCCAACAACAAGCAGCCGCAGCTGCCGCGGCAGCggcccagcagcaacagcagcaggcgGCCGCTGCTCATCATCAGCAACAAGTGGCCgtccagcagcaacaacaggcggctgctgctgccgctgcagcagctgctcatcaacagcagcagcaacagcaattgcagcagcaacaacaacttatcCAGCTTTCCATACAACAAGCAGCTCATCATCACCAACAGGAGCAGCAccgtcaacagcagcaacatcagcaacagcagcagcaacagcagcagcagcaacaacagcagcagcaacaacagcaacagcagcaacaacaacaacaacagcagcaacagcagcagcagcagcaacaacaacaacaacatcatcaacagcagcagcagcaggcgcaTGCCCCACCACCaccgcagcagcaacaacagcctcCGCCAGTGCCCATAGCCTTGATCAGTGATCCCAGTGCTTTGGCAAGAGCTGCCATGCAACTGCAACATTTGCCAGCCAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSVPSVVTPVVTTGGGTTITLGGGPPPSSLPKSEIKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAAHGGQLPPPPPLPPQTHATSAAAAAAAVAASTNNAAVAAVMASANAAAAAAAAASAAGVGVGGVPSTSGGGHIVTTTTTSSSTASSSAGSAGAGTTTTSTGELLMPKMEGGIHGVDAGGGNGGQSSQVTLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGMLTQVKQEVKPIIIPHHSTTTMHTIQQITAGAAGAGGGAVQLTPGLVPLVTSTLISHNAAAVAQQQSHKQQAAAAAAAQQQAAAAAAAAAQQQQQQAAAAHHQQQVAVQQQQQAAAAAAAAAAHQQQQQQQLQQQQQLIQLSIQQAAHHHQQEQHRQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQQQQQAHAPPPPQQQQQPPPVPIALISDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00917362; iTF_00914650;
80% Identity: -