Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010002261.1:550443-560302[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.2e-05 0.002 18.7 2.1 1 23 229 251 229 251 0.97

2 18 1e-05 0.00065 20.3 0.4 1 23 257 279 257 279 0.97

3 18 0.0015 0.096 13.4 0.9 1 23 285 307 285 307 0.95

4 18 2.2e-05 0.0014 19.2 3.1 1 23 313 335 313 335 0.97

5 18 5e-05 0.0031 18.1 4.7 1 23 341 363 341 363 0.99

6 18 9.1e-05 0.0057 17.3 5.7 1 23 369 391 369 391 0.97

7 18 4.5e-07 2.8e-05 24.6 4.3 1 23 397 419 397 419 0.98

8 18 1.6e-07 1e-05 26.0 2.4 1 23 425 447 425 447 0.97

9 18 9.4e-05 0.0059 17.3 6.7 1 23 454 476 454 476 0.97

10 18 0.00016 0.01 16.5 6.5 1 23 482 504 482 504 0.98

11 18 1.5e-05 0.00091 19.8 4.5 1 23 510 532 510 532 0.98

12 18 1.1e-05 0.00066 20.2 8.1 1 23 538 560 538 560 0.98

13 18 8.6e-06 0.00054 20.5 7.6 1 23 566 588 566 588 0.97

14 18 9.6e-07 6e-05 23.5 7.7 1 23 594 616 594 616 0.98

15 18 0.0003 0.019 15.7 9.5 1 23 622 645 622 645 0.95

16 18 0.00011 0.0067 17.1 0.9 1 23 651 673 651 673 0.98

17 18 0.0012 0.073 13.8 3.4 1 23 683 705 683 705 0.97

18 18 1.3e-05 0.00083 19.9 1.6 1 23 711 734 711 734 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.2e-05	0.002	18.7	2.1	1	23	229	251	229	251	0.97
2	18	1e-05	0.00065	20.3	0.4	1	23	257	279	257	279	0.97
3	18	0.0015	0.096	13.4	0.9	1	23	285	307	285	307	0.95
4	18	2.2e-05	0.0014	19.2	3.1	1	23	313	335	313	335	0.97
5	18	5e-05	0.0031	18.1	4.7	1	23	341	363	341	363	0.99
6	18	9.1e-05	0.0057	17.3	5.7	1	23	369	391	369	391	0.97
7	18	4.5e-07	2.8e-05	24.6	4.3	1	23	397	419	397	419	0.98
8	18	1.6e-07	1e-05	26.0	2.4	1	23	425	447	425	447	0.97
9	18	9.4e-05	0.0059	17.3	6.7	1	23	454	476	454	476	0.97
10	18	0.00016	0.01	16.5	6.5	1	23	482	504	482	504	0.98
11	18	1.5e-05	0.00091	19.8	4.5	1	23	510	532	510	532	0.98
12	18	1.1e-05	0.00066	20.2	8.1	1	23	538	560	538	560	0.98
13	18	8.6e-06	0.00054	20.5	7.6	1	23	566	588	566	588	0.97
14	18	9.6e-07	6e-05	23.5	7.7	1	23	594	616	594	616	0.98
15	18	0.0003	0.019	15.7	9.5	1	23	622	645	622	645	0.95
16	18	0.00011	0.0067	17.1	0.9	1	23	651	673	651	673	0.98
17	18	0.0012	0.073	13.8	3.4	1	23	683	705	683	705	0.97
18	18	1.3e-05	0.00083	19.9	1.6	1	23	711	734	711	734	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCTGTTCCCTCGGTGGTCACACCGGTGGTAACTACTGGTGGTGGCACAACAATAACATTGGGCGGTGGCCCACCACCCTCATCCCTGCCCAAGTCTGAGATCAAAGAGGATGGCAAACCGCCTCATGGCATTGAAATGTATAAAGTGAACATTGAAGATATCTCCCAGCTGTTCACCTACCACGAAGTCTTTGGCAAAATCCACGGAGATGTGGTGAATCATCAattggcagcggcagcacaTGGTGGACAGCTGCCACCGCCACCTCCACTGCCGCCGCAGACGCATGCAACGAgtgcagcggcggcagcggccgCTGTTGCGGCCTCCACAAATAATGCAGCAGTTGCTGCGGTGATGGCGTCCGCGAatgcagcggcggcggcggcagcagcagcctcgGCAGCGGGggtgggcggcggcggcgtgcCCTCGACCAGTGGGGGGGGCCATATAGTCACAACGACCACGACCAGCTCCTCCACGGCCAGCAGTAGTGCAGGGAGTGCGGGGGCAGGCACGACGACAACCTCAACGGGTGAGTTGCTTATGCCGAAAATGGAGGGCGGCCTACACGGCGTGGACGCTGGCGGCGGCAACGGCGGTCAATCATCCCAGGTGACCCTGGCGCCCGATGGCACGCCCATTGCCACCGGGACACATGTCTGCGATATTTGTGGGAAAATGTTCCAGTTCCGCTATCAGCTAATTGTCCACCGCCGCTATCACAGCGAACGCAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGGTTTACCACCTCGCAGGATCTGACGCGGCATGGCAAGATCCACATTGGCGGTCCCATGTTCACCTGCATCGTGTGCTTCAATGTGTTCGCCAACAACACCAGCCTGGAGCGGCATATGAAACGTCACTCAACGGACAAGCCATTCGCCTGCACCATTTGCCAAAAGACATTTGCCCGCAAAGAGCACCTGGACAATCATTTTCGTTCGCACACGGGTGAAACGCCCTTCCGTTGCCAGTACTGCGCCAAGACGTTCACGCGCAAGGAGCATATGGTTAACCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGCGGCAAGAAATACACGCGCAAGGAGCATCTAGCCAATCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGCGAAATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCGCATCGGTGCGACTTCTGCTCCAAGACGTTTACACGCAAGGAGCATTTGTTAAATCACGTGCGCCAGCATACGGGCGAATCACCGCATCGCTGCTCCTACTGCATGAAGACGTTCACGCGCAAGGAGCACCTGGTTAATCATATTCGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACGCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACACGCAAGGAGCATTTGACGAATCATGTGCGCCAGCACACGGGCGACTCGCCGCACCGCTGTTCGTACTGCAAGAAGACGTTCACCCGGAAGGAGCACCTGACGAATCATGTGCGACTGCATACGGGCGACTCGCCGCACAAGTGTGAATATTGCCAGAAGACGTTCACGCGGAAGGAGCATCTCAACAATCATATGCGTCAGCACTCCAGCGACAATCCGCACTGTTGCAATGTGTGCAATAAGCCGTTTACGCGCAAGGAGCACCTGATCAATCATATGTCACGCTGCCATACGGGCGATCGTCCATTTACGTGCGAAACGTGCGGCAAATCGTTCCCGCTCAAGGGGAATCTGTTGTTCCACCAGCGTAGCCATACCAAGGGACAGGAGTGCGAGCGCCCGTTTGCATGCGAAAAGTGCCCGAAGAATTTTATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGCGAGAAACCGCACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTATGCTGACGCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCACCACTCGACGACGACAATGCACACGATCCAACAGATCACCGCAGGAGCGGCCGGCGCCGGTGGAGGCGGAGCAGTGCAGTTGGCGCCCGGACTGGTGCCATTGGTAACTTCCACACTGATATCCCACAATGCGGCCGCTGCGGCCCAACAGCAATCGCATAAGCAACAGGCggcggctgccgctgccgcacaacaacaagcagccgctgctgctgcagccgcggcccagcaacaacagcaacaggcgGCCGCTGCTCACCATCAGCAACAGGTGGCcgtccagcagcaacaacaggcagcggctgctgccgctgcggcggcggctcatcaacagcagcagcaacagcaattgcagcagcagcaacaacttatCCAGCTTTCCATACAACAAGCAGCCCATCACCATCAACAGGAGCAGCatcgtcagcagcagcaacatcagcagcagcagcaacagcagcagcaacaacagcagcagcagcaacagcagcagcaacaacagcagcaacagcaacaacaacagcagcagcagcagcaacaacaacagcagattcatcaacaacagcaacagcaggctCATGCCCCGCCaccaccgcagcaacaacaacagcagcaacagcctcCGCCAGTGCCCATTGCCTTGATCAGTGATCCCAGTGCTTTGGCAAGAGCTGCCATGCAACTGCAACATTTGCCAGCCAATGTGGAACAACATCCGGTGGTTTACTAA
Protein Sequence: MQHVSAASSVPSVVTPVVTTGGGTTITLGGGPPPSSLPKSEIKEDGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHQLAAAAHGGQLPPPPPLPPQTHATSAAAAAAAVAASTNNAAVAAVMASANAAAAAAAAASAAGVGGGGVPSTSGGGHIVTTTTTSSSTASSSAGSAGAGTTTTSTGELLMPKMEGGLHGVDAGGGNGGQSSQVTLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGMLTQVKQEVKPIIIPHHSTTTMHTIQQITAGAAGAGGGGAVQLAPGLVPLVTSTLISHNAAAAAQQQSHKQQAAAAAAAQQQAAAAAAAAAQQQQQQAAAAHHQQQVAVQQQQQAAAAAAAAAAHQQQQQQQLQQQQQLIQLSIQQAAHHHQQEQHRQQQQHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQIHQQQQQQAHAPPPPQQQQQQQQPPPVPIALISDPSALARAAMQLQHLPANVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00560429;
90% Identity: iTF_00918329;
80% Identity: -