Lfen009605.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Lordiphosa fenestrarum
Gene Symbol
ftz-f1
Assembly
GCA_035044985.1
Location
JAWNNO010002955.1:52794-80845[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.6 2e+04 -5.1 14.5 30 125 11 134 4 149 0.35
2 3 2.3e-19 1.8e-15 57.7 0.4 1 79 316 393 316 424 0.74
3 3 1.8e-70 1.4e-66 226.0 2.3 157 408 520 764 502 766 0.92

Sequence Information

Coding Sequence
ATGTTATTAGAAATGGATCAACAACAGGCGACAGTGCAATTCATCTCGTCGCTGAATATGTCGCCATTTAGCATGCAactggagcagcagcaacagcagccctCCAGTCCCGCTCTGGCCAcaaatcagcagcagcaacagaacagcaacaataacaacaacaatgataATGATGGATTGAATTCCGATAACGACTACAGCGCCTATACGTTGCAACTGACgggtggtgctggtggtggcggAGCCACACACCACACCcatcaccagcaacagcagcagcagcaacattaccaacagcaacaacaacagcagcaacagaacaTAGCCAACAATGCCAATCAATTCAATTCCTCATCCTATTCGtatatatacaattttgaCTCACAGTATATATTCCCGACAGGCTATCAAGATACCACCTCCTCGCACTCACAACAgagtggtggcggtggcggaggaggcggtggcggcggcagcggcggagCTGGcaatcttttgaatggcagctccGGCGGCAGTTCAACCGGTGGCTACATGCTCCTTCCGCCTGCCACAAATTCCTCGGGCCAGAACAACAATTCCGGCCACCTGTCCAGCGGTGGCGGCCCACAGAATTCCGGTCCCGGTGGTGGTAacggcggcaacaacaactctGGCCATCCACATGGCGGCACTAGCGCCACATCGGGACACTCTTCGGGCGAGGCTATTGATTTTAAGCATCTCTTCGAGGAGCTGTGCCCGGTCTGTGGCGATAAAGTCAGTGGCTATCACTATGGCCTGCTTACCTGCGAATCCTGCAAGGGTTTCTTCAAGCGTACGGTACAAAACAAGAAGGTTTACACCTGTGTGGCCGAACGATCGTGTCACATTGACAAAACGCAGCGGAAAAGATGTCCCTACTGCCGTTTCCAGAAATGCTTGGAAGTGGGCATGAAATTGGAGGCTGTTCGTGCGGATCGAATGCGTGGCGGACGAAATAAGTTTGGACCGATGTACAAGCGGGATCGGGCGCGAAAACTGCAAGTGATGAGACAACGACAATTGGCACTACAAGCGTTGCGCAGTTCCATGGGCACGGATATTAAACCGACGCCCCTCTCGCCTGGCTATCAGCAAGCATATCCAAATATGAACATTAAGcaagaaatacaaataccTCAGGTATCCTCACTCACGCAATCGCCCGACTCATCGCCCAGCCCCATAGCCATTGCCTTGGGTCAGGTGAACGTAAGCACAGGCGGTGTGATAACCACGCCCATGAATGCTGGCAATGTTGGTGGCATCACTGGCGGCAACTCTGCGGGCAACGGCGGCAGTAATAATCAGAATAGTAGCAGTACAGGCAGCGGCACCGGAGCTGGCGGCGGAGGAGGCAATAATgcgggcggcggcggcggtggcaaTAATTCTGGCGACGGCCTGCAACGCAGTGGAGCCGGCGGgggaggaggcggcggcggcggaaaTGGCAGCAATTGTCATGaacctggaattggatctcTGCAGAATACGGCCGAATCGAAATTGTGcttcgaCTCTGGTACCCATCCATCGAGCACAGCCGATGCGCTCATAGAGCCCCTGAGAGTCTCCCCCATGATACGTGAGTTTGTGCAATCGATCGATGATCGGGAATGGCAAACGCAACTGTTTGCCTTGCTGCAGAAACAGACCTACAATCAAGTCGAAGTGGATCTCTTTGAGCTAATGTGCAAAGTGCTCGATCAGAATTTGTTCTCGCAAGTCGATTGGGCAAGAAACACCGTCTTCTTTAAGGATTTGAAGGTGGATGATCAAATGAAGCTACTGCAACACTCCTGGTCCGATATGCTCGTCCTCGATCATCTGCACCATCGCATCCATAATGGCCTGCCCGATGAGACGCAACTGAATAATGGTCAGGTTTTCAATCTCATGAGTCTTGGCCTGCTGGGCGTTCCCCAACTGGGTGACTATTTCAATGAGCTGCAAAATAAGTTGCAGGATCTGAAGTTCGATATGGGCGATTATGTATGCATGAAATTCCTAATCCTGTTGAATCCCAATGTACGAGGAATTGTCAACAAGAAAACCGTCTCCGAGGGACACGATAATGTCCAGGCAGCATTACTGGACTACACGCTGACGTGTTATCCCTCAGTTAATGACAAATTCAGTAGGCTAGTGAACATACTACCAGAAATCCATGCCATGGCCGCACGAGGCGAGGAGCATCTCTACTCGAAGCATTGCGCGGGTAGTGCACCCACACAGACGCTGCTTATGGAGATGCTGCATGCCAAGCGCAAGGTGTAA
Protein Sequence
MLLEMDQQQATVQFISSLNMSPFSMQLEQQQQQPSSPALATNQQQQQNSNNNNNNDNDGLNSDNDYSAYTLQLTGGAGGGGATHHTHHQQQQQQQHYQQQQQQQQQNIANNANQFNSSSYSYIYNFDSQYIFPTGYQDTTSSHSQQSGGGGGGGGGGGSGGAGNLLNGSSGGSSTGGYMLLPPATNSSGQNNNSGHLSSGGGPQNSGPGGGNGGNNNSGHPHGGTSATSGHSSGEAIDFKHLFEELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRSSMGTDIKPTPLSPGYQQAYPNMNIKQEIQIPQVSSLTQSPDSSPSPIAIALGQVNVSTGGVITTPMNAGNVGGITGGNSAGNGGSNNQNSSSTGSGTGAGGGGGNNAGGGGGGNNSGDGLQRSGAGGGGGGGGGNGSNCHEPGIGSLQNTAESKLCFDSGTHPSSTADALIEPLRVSPMIREFVQSIDDREWQTQLFALLQKQTYNQVEVDLFELMCKVLDQNLFSQVDWARNTVFFKDLKVDDQMKLLQHSWSDMLVLDHLHHRIHNGLPDETQLNNGQVFNLMSLGLLGVPQLGDYFNELQNKLQDLKFDMGDYVCMKFLILLNPNVRGIVNKKTVSEGHDNVQAALLDYTLTCYPSVNDKFSRLVNILPEIHAMAARGEEHLYSKHCAGSAPTQTLLMEMLHAKRKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00914539;
90% Identity
iTF_00914539;
80% Identity
iTF_00917271;