Basic Information

Insect: Lordiphosa andalusiaca
Gene Symbol: -
Assembly: GCA_035044965.1
Location: JAWNNM010003214.1:241169-244379[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 3.5e-06 0.00022 21.8 3.9 1 23 220 243 220 243 0.96

2 17 0.00038 0.024 15.3 0.9 1 23 250 272 250 272 0.98

3 17 0.36 22 6.0 0.2 2 23 304 325 303 325 0.94

4 17 0.00035 0.022 15.4 1.3 1 23 415 438 415 438 0.97

5 17 0.086 5.4 7.9 0.5 1 19 445 463 445 466 0.93

6 17 0.035 2.2 9.2 5.2 1 23 475 497 475 497 0.95

7 17 4.9e-06 0.00031 21.3 0.4 1 23 504 527 504 527 0.97

8 17 0.00013 0.0081 16.8 1.4 2 23 535 556 534 556 0.96

9 17 0.0032 0.2 12.4 0.2 2 21 583 602 582 603 0.94

10 17 0.0035 0.22 12.3 2.4 1 23 658 681 658 681 0.98

11 17 0.049 3.1 8.7 2.1 1 23 718 741 718 741 0.94

12 17 0.00018 0.011 16.4 1.6 2 23 774 796 773 796 0.95

13 17 0.00057 0.036 14.8 1.4 1 23 810 832 810 832 0.95

14 17 0.00014 0.0091 16.7 1.2 1 23 838 860 838 860 0.99

15 17 4.6e-07 2.9e-05 24.5 2.6 1 23 866 888 866 888 0.98

16 17 8.6e-05 0.0054 17.4 2.3 1 23 894 916 894 916 0.96

17 17 4.4e-05 0.0028 18.3 0.6 1 23 922 946 922 946 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	3.5e-06	0.00022	21.8	3.9	1	23	220	243	220	243	0.96
2	17	0.00038	0.024	15.3	0.9	1	23	250	272	250	272	0.98
3	17	0.36	22	6.0	0.2	2	23	304	325	303	325	0.94
4	17	0.00035	0.022	15.4	1.3	1	23	415	438	415	438	0.97
5	17	0.086	5.4	7.9	0.5	1	19	445	463	445	466	0.93
6	17	0.035	2.2	9.2	5.2	1	23	475	497	475	497	0.95
7	17	4.9e-06	0.00031	21.3	0.4	1	23	504	527	504	527	0.97
8	17	0.00013	0.0081	16.8	1.4	2	23	535	556	534	556	0.96
9	17	0.0032	0.2	12.4	0.2	2	21	583	602	582	603	0.94
10	17	0.0035	0.22	12.3	2.4	1	23	658	681	658	681	0.98
11	17	0.049	3.1	8.7	2.1	1	23	718	741	718	741	0.94
12	17	0.00018	0.011	16.4	1.6	2	23	774	796	773	796	0.95
13	17	0.00057	0.036	14.8	1.4	1	23	810	832	810	832	0.95
14	17	0.00014	0.0091	16.7	1.2	1	23	838	860	838	860	0.99
15	17	4.6e-07	2.9e-05	24.5	2.6	1	23	866	888	866	888	0.98
16	17	8.6e-05	0.0054	17.4	2.3	1	23	894	916	894	916	0.96
17	17	4.4e-05	0.0028	18.3	0.6	1	23	922	946	922	946	0.90

Sequence Information

Coding Sequence: ATGAAACTACCAGTCGTGTGTCGCACTTGCGATGCAACTGCGAGGGAAGCGGATAAACTGTTCAGTCTGGACACGCCCAGCAAAAAGTTCCCAGAAAAGTCGCTGGCGAGTATTCTAAGCGAATTGACTGATATCGATCTAAATGCATCCTTTGGTCAGAAGCTACCCTACAGTCTGTGCGCCAGTTGCTCCAAAAGACTCGTCTCGGCCTTTGAGTATGTGAAACAGGCTTTGGCTGCCAATGATTTGTTGATGAAACATCTCAATAAGGCGGCACCTACCAGCGATTGTTTGCTAGAGGCTCCCATGGAACTGTGTGCCGAGCAGCACGTGGAGGTCAAAATGGAAACGGAAGATGCAGAAGACACAGAGGGAGACAATGACATCACCTGCACAGAGTTGCCCGAGTTGGCTGCCGAGGAGTATTCAGACACGAAGCGATCCATTGATCCCCTGACAATGCTCGAGGCCGTGAAACAGGAGGCGGAAACTGCACAGAAATacgtggaggaggaggaggaggaggaagagcaCGAAGAGGAGACACATGATTTTGAGGCGGATTTCGAGGACGACGAAGATTCCCTTGACAATCTGCCGCTGCAGCGGCGCGTTCAAAAATGGAAGCAAGACACCAGtaagaaccaaaaaccaaatttccaGTGCACCGAATGCCCCAAAAGCTTTAAACGTGCCGAGCATTTAAAACAGCATAAATCACGCACCCACAGCAGTACCCGACCTCTCTTCTCTTGTTCGCTGTGCATACGCAAGTTCAGCCGCCAAGAGGCGCTGCAGTCCCATCTTAAAGTGCATCGAGACTCCAAGCGCTCAACCAACATCAGTGAGCACAAGAAGGCAAAGGCGATTGATGTCAATCTGTGCAAACCGCATGGCTATAAGATGATCGAGTGCATGATCTGTCAGAGTCAATACAACAAAATAGCCGATCTACGTCGCCATCTGACGGAGCATCCGGAAATTATTACACTGGCGGCGGGGCGTCCCAATGTGGAGCCGCAGGAGCTGGCTGAACTCTTTTACCCCGATGCTAAGAATGCTAGCGAGGAGCAATTGAAGCAATTAATACGCAAGGATTTGTCTAGTGGCAATTACCAGCGATTTTATTCGATTACCAATCAGTCTGGTTACGAGATGGACCTGGAGAGCTCGGAAACGGAGAGTGAGCCGGAAGCGGAGGATGAACAGCAATGTTCGACAAGCAGGTCACGACCTGCCAAATACAATTGTGAGCTATGCCAGCAGAGGTATCCGCGAAAGTATCAACTTTATGACCATCAGCGTCAGGCACATCCCTGGCTGGAGGCTCCCCATGTGTGTGGCCGTTGCGATGCCCGATTTGTTAGCCTACAGCTACTGAGACACCACAATGAATCACAGTGTCGGAATGCACAGAAACGTTTCCTATGCCACAAATGTCCGCTGCGTTTTCGTTGGAAACACAATCTAAGGGCTCATTTTCGGGAGCACCGAATCACCAACCAAATCTACGAGTGTCCAGACTGCAAACGGGTGTTTGATAAAAAGAAGTCACTTACTGTCCATCTACTGAGTGTACATGCTGAAGAATCTAATCTGCTGCCTTGCCAATGGTGTAGTCGCAAGTTCTATCGTCGGGACTATTTGGTCAAACATCTGAAACGTCATGGGTTGCGAGAACAGGACATTCCGCTGGCCGAAACGCTAATAGCGGCCACTTCCAAACCCCATGGGGTAAAGCGCATTTCCTGTAAGATTTGTAATCTTCAATTCGAGCGCATTCACGATCTGCGTGCTCACATACAGCTGGAGCTGAAGCTATCGCTGACCTCCACGTCGTCGCTGCACCAAAACTATGAATCTCTGCACAACTATTCCATAACCAATGAATCTGGTTTTGAACTGCAGCTGGGCGATTCAGAGACGGAGGATGAAATGCCAACGGTAATGGGAACTGGCAATCGTTTGTTGTACATTTGTGAGCTGTGTAGCGTACAGTGCCGGCGCAAGTACGAAATGATTCAGCATCAGCGGACCATGCATCGTTTTGACAAGATGCCGCATGAGTGCGACAAGTGTATCTTCAAGTGTGTGTCCAAGAGCATCATGGACCATCACCAGCGTGTGCAATGTGGCAGCCAGGAGAAAAAGTTTCCGTGCAGCCACTGTAGCTACAAATTCATGTGGCCTGAAAATCTGGAGCAACACATACATCTGCAGCATGGCCAGATAACGGCCACAAGCAGCTTGCAACTGTCAACCAGTGAAGACTCGAAAGTTCCAGTTAAGCCAGCTGCCTCAGAGGATGTGGCAATGTTGCAGTGCCCGCACTGTGATCGCACTTATCAAATGAAGTCCAGGCTTAACAATCATATACGAGATGTTCATGTAAATGGCGATCGCAAGCGCAAAGAGGCCGTTAAACTGTTCCTTTGCTCGCTGTGTGGTCGCGAGACGAAATCGGCCGCCTGCCTGGTAACCCATATGCGTCGCCACACTGGCGAAAAACCTTTCAAATGCGATCTTTGTGAAATGGCCTTCCCCCGGCACTCGGAAATGATATCGCATCGGCGCATGCATACGGGAGAGAAGCCCTTCCACTGTACTGTCTGTGGCAAAGATTTTGCCCGTTCCGATAAGCTGAAGAGGCACATGTTGACGCACAGCGGTTTGAAACCGCATGCCTGCACATACTGCGAGAAGAGTTATCGTCAGGCCAAGGATCTAAAGCTGCATCTGCAGCAGCACACGGGCGAATGTCCTTTCATCTGTGGCACTTGCGGTGAACGATTCATACAGAGCAGCACACTGGAGAAGCATCGCATGATGCGACGGCATTTTGACGAAGTGGAAGTAGCACAGAATTAG
Protein Sequence: MKLPVVCRTCDATAREADKLFSLDTPSKKFPEKSLASILSELTDIDLNASFGQKLPYSLCASCSKRLVSAFEYVKQALAANDLLMKHLNKAAPTSDCLLEAPMELCAEQHVEVKMETEDAEDTEGDNDITCTELPELAAEEYSDTKRSIDPLTMLEAVKQEAETAQKYVEEEEEEEEHEEETHDFEADFEDDEDSLDNLPLQRRVQKWKQDTSKNQKPNFQCTECPKSFKRAEHLKQHKSRTHSSTRPLFSCSLCIRKFSRQEALQSHLKVHRDSKRSTNISEHKKAKAIDVNLCKPHGYKMIECMICQSQYNKIADLRRHLTEHPEIITLAAGRPNVEPQELAELFYPDAKNASEEQLKQLIRKDLSSGNYQRFYSITNQSGYEMDLESSETESEPEAEDEQQCSTSRSRPAKYNCELCQQRYPRKYQLYDHQRQAHPWLEAPHVCGRCDARFVSLQLLRHHNESQCRNAQKRFLCHKCPLRFRWKHNLRAHFREHRITNQIYECPDCKRVFDKKKSLTVHLLSVHAEESNLLPCQWCSRKFYRRDYLVKHLKRHGLREQDIPLAETLIAATSKPHGVKRISCKICNLQFERIHDLRAHIQLELKLSLTSTSSLHQNYESLHNYSITNESGFELQLGDSETEDEMPTVMGTGNRLLYICELCSVQCRRKYEMIQHQRTMHRFDKMPHECDKCIFKCVSKSIMDHHQRVQCGSQEKKFPCSHCSYKFMWPENLEQHIHLQHGQITATSSLQLSTSEDSKVPVKPAASEDVAMLQCPHCDRTYQMKSRLNNHIRDVHVNGDRKRKEAVKLFLCSLCGRETKSAACLVTHMRRHTGEKPFKCDLCEMAFPRHSEMISHRRMHTGEKPFHCTVCGKDFARSDKLKRHMLTHSGLKPHACTYCEKSYRQAKDLKLHLQQHTGECPFICGTCGERFIQSSTLEKHRMMRRHFDEVEVAQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00918346;
90% Identity: iTF_00917384; iTF_00918346; iTF_00915515; iTF_00916447;
80% Identity: -