Lmig018452.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Locusta migratoria
Gene Symbol
-
Assembly
GCA_026315105.1
Location
scaffold102290:152129-152974[-]

Transcription Factor Domain

TF Family
CSL
Domain
BTD domain
PFAM
PF09270
TF Group
Beta-Scaffold Factors
Description
Members of this family of DNA binding domains adopt a beta-trefoil fold, that is, a capped beta-barrel with internal pseudo threefold symmetry. In the DNA-binding protein LAG-1, it also is the site of mutually exclusive interactions with NotchIC (and the viral protein EBNA2) and co-repressors (SMRT/N-Cor and CIR) [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.57 1.2e+04 -3.4 0.0 24 44 177 197 169 201 0.43
2 2 1.8e-24 3.7e-20 72.5 0.1 1 52 215 266 215 270 0.96

Sequence Information

Coding Sequence
ATGCCTCACCAGTTTGGACTCCCCACTATGGCGCATAGTATGCAAACTCCACCTTCACCACCAAATTTCTTTGAAAGGTTCAGTTCCATGCTGTACAGACCAGATGAGCAAAGACTTACTAGGGAGGCAATGGAAAGGTATTTGAGGGAGCGAAGTGATATGGTGATAGTGATACTTCATGCCAAAGTAGCTCAGAAATCTTATGGAAACGAGAAACGCTTTTTCTGTCCACCTCCCTGTATATACCTATTTGGTGAAGGGTGGAGGATGCGCCAGGAACAAATGCTGAGAGAGGGAGAAACAGAACAAGCAGCTCAGTTGTGTGCATTTATTGGCATTGGAAACTCTGATCAAGATATGCAGCAGCTGGACTTGAACAATGGTAAGCAGTATTGTGCCGCAAAAACGTTGTACATTTCGGATTCGGACAAACGGAAACACTTCATGCTCTCTGTGAAAATGTTTTATGGCAACGGCCATGACATAGGTGTTTTTCATAGCAAAAGAATCAAAGTGATATCAAAGCCTTCGAAAAAGAAGCAGTCTTTGAAGAATGCCGATCTGTGCATAGCTAGTGGTACCAAAGTGGCTCTCTTCAATAGACTTCGGTCTCAGACTGTAAGCACGAGGTACCTCCATGTGGAAAATGGAAACTTTCATGCGAGTTCTACGCAGTGGGGAGCATTTACAATTCATTTGTTAGATGACAATGAATCTGAGTCTGAGGAATTCGCCGTTCGCGACGGTTATGTACATTACGGAAGTACAGTGAAACTTGTTTGCAGTGTCACCGGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGGCACTCTTAG
Protein Sequence
MAAEENPRTRAPPKERAKADAASQQGRSVGGQGTGPSSDPARRLKHRGANAAQARASCTAGQHEADQRREQTTPALSARTYRHPYGTHLAQARHVSADPLPDQARHAPILRANPYPEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATPPRGPLPDFQGPRGRSGHRRNCGALRVPNPISLLEDSRELERSCRKENSSPISRRRLRVLLGYPDEHL