Lmig020410.1
Basic Information
- Insect
- Locusta migratoria
- Gene Symbol
- -
- Assembly
- GCA_026315105.1
- Location
- scaffold43028:548966-945178[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.9e-27 4.1e-23 81.4 0.0 3 72 601 671 599 676 0.95 2 3 1.9e-32 4e-28 97.5 0.0 2 77 994 1070 993 1072 0.96 3 3 4.1e-31 8.7e-27 93.2 0.0 3 75 1229 1302 1227 1306 0.95
Sequence Information
- Coding Sequence
- ATGGGCTGCCGCGACCCCCCACCACGCGGCGCGCGCCCCCTACCACGCCGCACCCTAGCGACGGAGGCGCGCCGCTCGGGCTCTCAGTCCGAGGGAGGGAGAGCTCACGATCGGACGATCCTTCCTCGACGCACGTGCCTCTGCTTTTCACTTCGTCTGCCTTCGAAGCTGAGACCACGAGAATCACACCGCCGCCTCCTTCCGGTGCATCACGTCGACTGTCAACCGAGACAACACGCAGCATTCTGTTCGTCGCCGTCGTCCGAGACTTCGTCCTCCAGGCTGGTGTTGTCATGGCAACGATACATCCTGCGAGTAATCTCAGTCCGCAAACGAATTCCGGCGCTTCGGACGAACGATCAACGAGCGACAGCAGCCAGCAGCGACTGTCTGACGCAGAGTGATTCGGGCGATGACACCGCCAGGAGGTGGACACGAGAATCCGTCAGCAGACGTCAGCCCAGTGACTACTCGTGTTGTGTGTGCTGTCCAGAAGACCGGACCGATTGCTTCCCGGCATATCGCGTGCGAAAGTTAATTTTTTTTTATTATTTTTTTGTGACGCTCTGCCTCCTTTTTTTCTTTCGCCCTCGAACGACCGTCACGCGATATACGAAAACGCGCGCGCGGGGCACCTGTAATTGTTTGGAAAAACGAAATCTTGACGACGGCTTAGCCGCAACGAATTGGGGAAAATTTGTGCCGCCAGTGGGACAGAGAGAGAGTTGGACTGTTTTTGGGGACACATTGGAAGCAGTTGCGGTGCTTTTTTTTTCGTGGGACTGTACCACCGAGAGGTGGAGTATATCGGGAACGGAGCGGCACTTTGATGGGCGGCGCTCGACTCGCCGGCGTCCCTGCCTGCCGCCGGCCACCTGCGCCGCCCAGGGGGCCAAGATTTTCGGCACCGCGCTAGATGTGACGACGCCAGCCATGGACATACAGGCCATGCAGTCGATGGACTGGCTCTTCAAGAAGGAGCGCATCTACCTGCTGGCGCAGTTCTGGCAGCAGCGCGCCACGCTGGCCGAGAAGGAGGTGAGCGCTCTGAAGGAGCAGCTGGCCTCCGGGGGCGGCGGGGGCGGAGGGCTGCCTCCCCAGCAGGGCAAGACGGCCGACATGGAGCCGGCCGCCCTCGAGCACGAGCTCGCCGCCAAGGACAAGGAGATCGCGCAGCTGCTGGAAGACGTGCAGCGGCTGCAGACGACGCTGTCGCAGCTGCAGGAGTCTTCGGCGGCGCAGGTGGCGCGGCTCGAGGAGCAGCTGGAACACCGGCGACAGCACATCGCCAGGCTCGAGAACAGGCTGGACCAGCAGCGAGACTACGATGACCTCAAGCGGGAGGTCAGCCTGCTGCGGGCGATGGAGCTGCCGCTGTCTGGAGACAAGCCGCTGGAACTGCTGCTGCAGGAGAGGAGCAAGGCGGCCGCGACGGCGTTGCAGGCGGAGGCCAAGACGCCGGAGTCTGCAGGTGGCCCGCGTACGCCACCGGACGGCAGCGGACCCGCCGCGCCTGATGGCGTCGCCAGCAATCCAGGATTGGTGATCCCGCCGCCGCCCACGAGTACGCCGACTATGCCGCCCTCGTCCGCCGCCCCCATGTACTTCCGCAGCCCGGCGGACGAGGCCAGCATGAAGAGCCCCTTCCGCTTCGACGACCCGCGCAGTCCGTTCCGCTTCACCGACGATTCGCCCGTGGGCGGCGTGGCGCGGCTCGGCGAGTCGCTCATTCCCAAGGGGGACCCCATGGAGGCGCGCCTGCAGGAAATGCTGCGCTACAACATGGACAAGTACGCAACGCAGAATCTGGACACGCTGCACATCTCGCGGCGCGTGCGAGAGCTGTTGTCCGTCAACAACATCGGGCAGCGGCTGTTCGCCAAGTACGTCCTCGGCCTGTCGCAGGGCACCGTCTCCGAGCTGCTCAGCAAGCCCAAGCCCTGGGACAAGCTCACCGAGAAGGGTCGCGACTCCTACCGCAAGATGCACGCCTGGGCCTGCGACGACAACGCCGTCCTGTTGCTCAAGTCGCTCATCCCCAAGAAAGGAAAGGACTCCGGTATGCCTCCTTTTGGAAGAGGTGAGACAGACAACATGACCGAAGAACGAATTGCACATATCCTAAATGAGGCTTCACAAATGATGAAAGTGGAGGACAGCCACAGCAGTGACAGCAAATCTCCAAACCATGCACAGGAAAAGGTGGCCCGAATCTACCAGGAGGAGCTGGCCAAGCTGATGGGGCGACGCATGGACGATCACATGCGGGGACCTCGTGAACCTTTCCAAAGCCTCCTGTTCCCGGGATTTGGGCCAATGGACCGTACACAGGAAGAGATCCGTATGGCACTAGATGCATATCACCGAGAATTAGCCAAGCTGAATTCTGCTTGTCCAAGCACTGCTGGCCTACTGGCTCTGCAGCTATTTGACACAAAAACAACTGAGTCACGGACATCAGGCTGCAGGCTGAATGGAGTGGTGCAAGACCTGTCAATGCCAAAACCAGTGACATCTTCAGCAGACCAGAGGGATGAGAAACTTTCCAATGGTGAACTCCCAATTACAAACTGTGACCCGGCATCTGCTGCAGCTGCTGCTGCAGCTGTCGCCGTCAAGAAAGAAGTACTTGAGTCTGTCGCAGATGCTCTAAGACACGCTGGCAGTGCCTTCTCTCTTGTAAGGCCAAAAATTGAACCAGGCATAGGACAACCAGGACAACAACAAAGTGGAGGGTCTGCAGCAACAACCCCTGGGATACCCACAAGTGGCACCAGTCCACTCAGCAATTCCATCCTGCCACCAGCGATGACCCCAGCTGATGACTTTGCATCTTCGGCAGCTGCAAGTCCGCTGCAACGAATGGCCAACATCACCAACTCTCTCATTTCGCAGCCCAGCACCCCTACTCATCATTCACCCTCTCAGAGGCCACTAAAAGCAGTGCTGCCACCCATTACACAGCAACAGTTTGACATGTACAATAATCTCAACACAGAAGAAATTGTCAAGAAGGTGAAGGAGTCGTTGAGCCAGTACTCAATAAGCCAGCGGCTGTTTGGAGAGTCAGTGTTGGGATTATCACAAGGCAGTGTGTCAGACCTGCTGGCACGGCCCAAGCCATGGCACATGCTTACACAGAAGGGCCGAGAGCCTTTCATCCGCATGAAGATGTTCCTCGAGGACGACAATGCCGTCCACAAGCTGGTCGCTAGTCAGTACAAGATAGCACCTGAGAAGCTCATGAGGACTGGCAACTATGCTGGAGGCCCTCTGAAATCTCCATGCGCCTCACTGACGAAGCCGCAGCCACCAAAACTCTCAAAGCAACCAGAGCATCACAATGGGCATGGTGGCCATGGTGGCCACTTAGGCCACGAGTTGCCTGCCTCGTTGCAGCTGCATCACCCACACCATGCAGCCGCCGCAGCAGCTGCCGCTGCTGCTAGTGCTGGTGCGCCCTCGTCGGTGCCACAGCCTCCACCACCTCCCATGCTGGTGGGACCTGGTGCACTGGGGCTTGCGGGCTATGGTGCTGCACTCACTGCCGACAAGAAGGATCGCCATGGCCAGCCACCACCACCACCACCACAGCAGCACCAGCAGCCTGGCATGGCCATGGCAGCACTGCGTGGTCTCCAGCAACACGTGGCACCTTCAGTTTACGAGATGGCTGCACTGACCCAAGACCTCGATACGCAGACCATCACCACCAAGATCAAAGAGGCACTCCTTGCCAACAACATAGGCCAAAAGATTTTTGGAGAGGCGGTCTTGGGGCTGTCTCAAGGTTCTGTGAGCGAGCTGCTCTCCAAGCCGAAGCCTTGGCACATGCTGAGCATCAAGGGTCGTGAGCCCTTCATCCGGATGCAGCTGTGGCTCAGCGATGCTCACAACATCGATCGGCTGCAGGCACTGAAGAACGAGCGTCGCGAGGCCAACAAGCGACGCCGCAGTGCTGGGCCCCCTGGATGCGCAACAGGAGGCGGTGTCGCGGGTAGCAGTGGCAGTGGAGGTGGCGGCGGGGGTGGCGCAGACAACAGCAGTGACACCTCCTCCAATGACACCTCTGAGTTCTACCACAGCCCGAGCCCTGGACCAGGACCACCATCAGCCAAAAAGCAACGTGTCCTCTTCTCGGAGGAGCAGAAGGAAGCACTGAGGTTGGCATTTGCTCTAGATAGCTATCCAAGTGTGGCCACCATTGAGTTCCTTGGGGCAGAGCTGGCGCTGTCCACCAGGACCATCACCAACTGGTTCCACAACCACCGAATGAGGCTCAAGCAGCAGGTTCCACATGATGGTGCCAGTGGAGGTGGTGGCACTGGCCAGTGCCGTGAGGGCAGCGTACCACCAGGTGCAGGAGGAGGTGGCAGTTTCGACCCTGTCCAGTTCCGGTTGCTGCTCAATCAGAGGCTGCTGGAGCTCCAGAAGGAGAGGATGGGGCTGGCACCAGTGCCACTGCCCTACCCACCATACTTTGCAAACAGCAACTTGGCAGCACTCATGGGGAGAGGTCTCTTGCCATCACCAGGGTGTGATGTTGGGAGTGGGCCTTTGGCTGGTGCAGCCGCCGGCGGNNNNNNNNNNNNNNNNNNNNNTGCTGCTGCTGCCGCCAAGGAGCAGTTTAGTGGGCTCGACCTCAGCATGGGAATCAAACGTGAGCCTGACTTTGAGGAGGAGGAGGATGCAGAGAGCAACCTTGGCAGCGAAGACTCCAATCTGTCTGGTGGCAGCCTGCGAGATGTGGCTGCATCTTCCGTCACTGGGTCTTCCACGAAAAAGGATCTCCCACTTTCATCCTCTGTGGCAGTGTCGCAGCCATCGAGGACATCGCGGCGGAAGCCAGCTGCTCCCCAGTGGGTGAACCCTGAATGGCAGGACGCCACTGGTCATGGGGAGGACCACAAGGACAAGGGTGGTGATCAGGAAGTCATCATAAATGGAGTGTGTGTCATGCAGACTGATGACTATGGAATGAAACTGTCCAAAGATGAAGAAACTGTCCGTGTAGAGCCAACACCTGTTCTTGACAGGTATGATGAAGATGATGATGAAGACCAGTGTAGTGAGGCCTCATCAGCCGCGGGGGCGGAAAATGCCGGCAGTGAAACGGCAGTGACAACTCGGCCTCCGTCGGCGTCAGCCTCTGACACCGGGGTTCCAGCATCTGCTGCAGGTCAGGATGGTGATGATGTTGATGAAGAACATGAGCACAGGAGCATAAAGTCAGAACCACGGTCCCCAACCATCGCAGCTGATGATGCTGGTGCATTACCGGAAACGGCAGTCACGCGTGAAGAAGAGGCTGCGGGTGAACATTCCGTTGCTGACGGGTGGCAATCGGAAGCAGAATCTGCAGACGTGTTACACAATAGGATTAAGACTGAGGAGCAGGAGGACAGGTGGGAGTATTAG
- Protein Sequence
- MAAEENPRTRAPPKERAKADAASQQGRSVGGQGTGPSSDPARRLKHRGANAAQARASCTAGQHEADQRREQTTPALIARTYRHPYGTHLAQARHVSADPLPDQARHAPILRANPYPEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTGATPPRGPLPDFQGPRGRSGHRRNCGALRVPNPISLLEDSRELERSCRKENSSPISRRRLRVLLGYPDEHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00912707;
- 90% Identity
- iTF_00912707;
- 80% Identity
- iTF_00912772;