Lcra035283.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- ARID5B
- Assembly
- GCA_947563755.1
- Location
- OX387429.1:6739244-6743675[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.55 3e+04 -3.0 0.0 34 48 12 26 10 32 0.76 2 4 4.1e-26 2.3e-21 77.6 0.0 2 89 117 202 116 202 0.94 3 4 0.8 4.3e+04 -3.5 0.0 56 83 634 663 611 664 0.66 4 4 0.21 1.1e+04 -1.6 0.0 12 38 834 866 825 867 0.56
Sequence Information
- Coding Sequence
- ATGATGAAACGACTCGACGGCGTCGAAGACATCTATTTAAAATACAAAATAGTAAACGCTTTGGGTGGATTCTACGTAATTCATCCGAATACCAGAGTACTCTTCTGCAGAGATACTTTCGATTATCCCGAATTAGAAGGTCACGAATTACTTTGCAACCATTTGGCTCCAAAACTTAAGGGCCGACCTAGAGGAAGACGGAAAAAACGGAGCGTTTCGCCGGGTTCGGAAAGCAACGAATCCGAATCTTCTGTTACTACCAGTACAAAGGCTGAAGCAAAGAACAATGCTCAAGAAGTTTCTGAAAGTGCTCCTCGTCGTAGTACCCGATGCCACGAAAATAATGAAAACAAAGAATTCGTACGAAAACTTGGGGCTTTTATGAAATCAAATCGTACCCCCATCGGAAGAATTCCTTCATTGGGATACAAAGAACTGAATCTACACGAATTTTTCACCAGAGTACAAAAATTAGGCGGTTACGATTGCGTAACCACCAACCGCTTGTGGAAATCCATTTTCGATGAAATGAGTGGACACCAGAATAGTACAAGTGCAGCTACGATTATAAGAAGACATTACGAAAGATTTTTATTACCGTACGAAAGGCATCACAGAGGCGAAGACTACAAACCTCTACCAGGTTCGGAAAGGAGAAGATTAAAATATAAACGAGGAAGTGGCAGCTTAAGTGATGCTGAATCAAGTAGCGACAGTTCAATACCTTCGACGTCCAGAAAATTATCCATTTCGGAAAATTTAACAGATACAAAGCCAGAAGGAAAACCGTCATCTTTGAGAAGCGTTCGCGTGAAACCGGACCGACAAAAAGACAAACAAATACAGAGTGAAAAGGACAACGTCAACAACAATAATAACAATGAAAAATGGAAACCGTCGATAGAGCAATCGGAAGATGGAAACGACGTTAAAAAAGTAGAAAAATTGGTAATTAAAACGGAAAGTATGACATTGAAAACGGAACTTTCCACTGTAATTACACAAAACCATCCCTTAAAAATAGAATACGACTCAGTAAAAACCGAAACCGAAGAAAAAAATGGTCAAATTAAAATAGAAAATACAAATATACCCGTGACAATATCAGTGAAAATAGAAACCAACCTTAAAACCGAAACGAATCCAATAAAATTAGAAGAATGTTCTTCGGTAAAAATAGAAAACAGTCCAATTCCCATAAAAACCGAAGAACCCGAAAATAATGAAATAAAAATAGAGATGGTACCGGAAAAAACAGAAACAGCCGCAACACCCGTAGCTGTAAAAGTACCTATAAGTGAGGTTATGTCACCGGTAGAAGGAAAAGAAAACATACCGCTAGTAAAATCAGCAGAAAAGAATCTGGAAATCATAGAAGTACCTTATAGACCGAAAGCTCCTGAAACCCCCAGCTTGGAAGCCGAAAGTTACAAAAACAATTTCATCCACGAATTTAAAAAGAGAAAATTGGATATTTTAAAAGAAGGTGGATTGGAAGTAACACCAGTAAGAACTTCGACGCAAAAAGACGGTCGACCTTCGGTTATACAAACCCCGCCAGTACAACTAATTCCAAAACCTGCCAAATCGGAAACGATGCCGCCTCCAACCAGTGTTCCTTTAAAAAGAACTCATATAACAGTTCCTCAAACGTTAAATATCAGCCAAGTACATTCTACGCCTACAAAGAAATCGCCCGTTCCTAATTATAGTTTTGTAAACGGTGCTTCACCTCCTAAAGTCGTCCAATCGAGGTCGATTTATACCTACTCGGAGAAAACTATATACGGGAATCCCAAAGACATTCTTAACCCTATCGTTCACGCACCAAAATTCGTTGATTCGGTATTAAGACAACCCGGCGGTGATCCGGTAGATTTATCGGTGAACAGTCCGCAAAAACCGATCGTAGAAATAATGAGGATACCGCAAACGTCTTCAAATTCGCCTTTTAATCGAGACAGAGTAACTAAAAACTTGTACAAGACGAATTCGATAATGGACGGTAGACGATTAGGTCCGAACTTGGAAATAACTTTAGTCGGACCGAACAGCAAAAATAATTATCCTCGAACGCAACAAAAGATGTACAATAATTATCAGACGGGTGCGTCGCCGCACGTCGGACCATCGCAAAAACGAGTCTCGACCGACTATTACGCATCGTCGAAAATTACTAAAAACGAAGAAAATGGAAAATATAAACCCAAACAAAACATAGATTTCAACTTAATGATGAAACACGAATCAGTAAAACCAGCGACGAGTCGACAACCGCAGCAGAATTTAAAACAATATTCGAATACTTTACCGACTTTTCCGCCTTATTTAACGCAATTTTACGAACACACTAATAAAAATATGCCGCCCTATCTGCCTTTCATAGATCCAACTATGTATTACACTGCCGCGATGCAGAATTTATATTCGACCAACAATTTAAACTCCGCGCCGATCTTACCGATGCCCACGCCCGAGCAGCTCAAATTGTACGCGGAGTTGATGGCGCACGGTAGGATGCCTTATCCTTTTCAGATGCCGCAGGATACTAGCAAGTTGAAGAAACAAAAATGGGTCGACTTGTACTTTCTTTTTCGTGGCGACTCCGAAGGCTTGCAGCGACATACCGCAGGCGTCTCCAGCGTTCGTATTCCGTTTCGGGGCCTCGATCACTTGATATCCAAAGCCCTGTGA
- Protein Sequence
- MMKRLDGVEDIYLKYKIVNALGGFYVIHPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSVSPGSESNESESSVTTSTKAEAKNNAQEVSESAPRRSTRCHENNENKEFVRKLGAFMKSNRTPIGRIPSLGYKELNLHEFFTRVQKLGGYDCVTTNRLWKSIFDEMSGHQNSTSAATIIRRHYERFLLPYERHHRGEDYKPLPGSERRRLKYKRGSGSLSDAESSSDSSIPSTSRKLSISENLTDTKPEGKPSSLRSVRVKPDRQKDKQIQSEKDNVNNNNNNEKWKPSIEQSEDGNDVKKVEKLVIKTESMTLKTELSTVITQNHPLKIEYDSVKTETEEKNGQIKIENTNIPVTISVKIETNLKTETNPIKLEECSSVKIENSPIPIKTEEPENNEIKIEMVPEKTETAATPVAVKVPISEVMSPVEGKENIPLVKSAEKNLEIIEVPYRPKAPETPSLEAESYKNNFIHEFKKRKLDILKEGGLEVTPVRTSTQKDGRPSVIQTPPVQLIPKPAKSETMPPPTSVPLKRTHITVPQTLNISQVHSTPTKKSPVPNYSFVNGASPPKVVQSRSIYTYSEKTIYGNPKDILNPIVHAPKFVDSVLRQPGGDPVDLSVNSPQKPIVEIMRIPQTSSNSPFNRDRVTKNLYKTNSIMDGRRLGPNLEITLVGPNSKNNYPRTQQKMYNNYQTGASPHVGPSQKRVSTDYYASSKITKNEENGKYKPKQNIDFNLMMKHESVKPATSRQPQQNLKQYSNTLPTFPPYLTQFYEHTNKNMPPYLPFIDPTMYYTAAMQNLYSTNNLNSAPILPMPTPEQLKLYAELMAHGRMPYPFQMPQDTSKLKKQKWVDLYFLFRGDSEGLQRHTAGVSSVRIPFRGLDHLISKAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00735264; iTF_00910303;
- 90% Identity
- iTF_00735264;
- 80% Identity
- -