Gnym012705.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- ARID5B
- Assembly
- GCA_963978555.1
- Location
- OZ021706.1:20475331-20500155[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.1 2.9e+04 -3.3 0.0 34 48 208 222 206 227 0.77 2 3 5.1e-25 2.1e-21 77.3 0.0 2 89 313 398 312 398 0.94 3 3 7.8 3.2e+04 -3.5 0.0 56 83 832 861 809 862 0.68
Sequence Information
- Coding Sequence
- ATGGGTAATAGTGATATACAGTTCGTCGGCGGGGCATGTGGCCAACATGGACCTTACACGTTCTACAAAGCGTTCAAATATAATAAAGACGGAATTTGTCGAATAGTGACTTTGAGTGAATTTTTCCTTGTAAAAATGTGGAGAGACAGTGACTTGTTGTGTATCGGCGAACTGCAATTATTGTGGATCGATAAACATAGTGAACAAGTGTTGGCGAGTTTAAGATTGTATTTCTTACCGGAAAATACGCCGGAAGGTCGTTTGGATCATGGAgaggaTGAAGTTCTCGCGATAACGGAAAAAGTAGTGATAAGAGTAGAAGATTTAATAACGCTGATAACGGAGGAAGCAGAATGGACTTGGGGTCGATTAGCCAAGTCCGAACAAGACATGAAGCAATCGGATGAAAATCCTAACGATGACGACGTGCCTCCTAGAAAACCCGCCGGATTAAGTTTTACAATAAACGAAACTTTATTGGACTATACAGATGTTGAAACCGAAAGAAAACACTTGGatAATTCAAAAACAATGAAAGATCCACACGTGGTTATTTTAAGTTTTCCAAAATACTGCCGATACAGGGCCATGATGAAACGACTAGACGGCGTCGAAGAcatctatttaaaatataaaatagtaaACGCTTTGGGTGGATTCTACGTAATTCATCCTAACACCAGAGTACTCTTCTGCAGAGATACTTTCGATTATCCCGAATTAGAAGGTCACGAATTACTTTGCAATCATTTGGCTCCAAAACTCAAGGGCCGACCTAGAGGCAGACGAAAAAAAAGGAGCGTTTCGCCGGGTTCGGAAAGCAACGAATCCGAATGTTCTGTTACTACCAGTACAAAGgcTGAAGCAAAGAACAATGCTCAAGAAGGTACTGAAAGTGCTCCTCGGCGTAGTACCCGATGCCacgaaaataatgaaaacaaagaATTCGTCCGAAAACTTGGAGCTTTTATGAAATCAAATCGAACCCCCATCGGAAGAATCCCTTCCCTGGGATACAAAGAACtgaaTTTACACGAATTTTTCACCAGAGTACAAAAATTAGGGGGATACGATTGCGTAACGACCAATCGCTtgtggaaatccattttcgatgAAATGAGTGGACACCAGAATAGTACAAGTGCAGCTACGATTATAAGAAGACATTACGAAagATTTTTATTGCCGTACGAAAGACATCAAAGAGGAGAAGACTATAAAACGCTACCAGGTTCGGAAAGAAGAAGATTAAAACATAAACGAGGTAGTGGCAGCTTAAGCGATGCCGAATCTAGTAGTGACAGTTCAATACCTTCCACCTCAAGAAAATTATCCATTTCGGAAAATGTAACAGATACAAAGgAAATTGTTAAGCCAGAAGGGAAACCGTCATCTTTGAGAAGCGTCCGCGTGAAACCGGATAGACAAAAAGACAAACAATTACAGAGTGAAAAAGACAATGTCaacaacaataataacaatgaaaaatgGCAACCGTCGATAGAGCAGCCAGAAGATGGAAACGACGTcaaaaaagtggaaaaattaGTAATCAAAACGGAAAATATGACAGTAAAAACGGAACTTTCCACTGTTATTACACAAACCCATCCCGTGAAAATAGAATACGACTCGGTGAAAGCCGAAACCGAAGAAAAAAATGGtcaaattaaaatagaaaatacaaaTCTACCCGTGACAATATCAGTGAAAATAGAAACCAACCTTAAAACCGAAACAAATCCAATAAAATTAGAAGAAACTTCTTCGGTAAAAATAGAAAACAGTCCAATTCCCATAAAAACCGAAGAAACagaaaataaagaagaaataaaaatagagatGGAAAAAACGGAAACAGCAGCAACACCAGTAGCAGTTAAAGTACCTGTAAGTGAGGCTATGTCACCGATAGAAGGAAAAGAAAACATACCGTTAATAAAATCCCCAGAAAAGAATCTGGAAATAATAGTACCTTATAGACCGAAAGCTCCCGAAACCGCTAGCTTGGAACCCGAAagttacaaaaataatttcatacacgaatttaaaaagagaaaattggaTATTTTAAAAGAAGGTGGATTGGAAGTAACGCCGGTAAGAACTTCGACGCAAAAAGACGGTCGACCTTCGGTTATACAAACCCCTCCGGTACAACTAATTCCAAAACCTCCTAAATCAGAAACTATGCCGCCTCCAACCAGTGTTCCTTTAAAAAGAACTCACATAACAGTTCCTCAAACGTTAAATATTAGCCAAGTACATTCAACGCCTACGAAGAAATCGTCCGTTCCTAGTTCTAGTTTCGTAAACGGTGCTTCGCCTCCTAAAGTCGTCCAATCGAGGTCGATTTATACCTACTCGGAGAAAACAATTTACGGGAATCCCAAAGACATTCTTAACCCTATCGTCCACGCACCGAAATTCGTCGATTCGGTATTGAGACAACCTGGTGGGGATCCGGTTGATTTATCGGTGAACAGCCCGCAAAAACCGATCGTTGAAATAATGAGGATACCGCAAACGTCTTCAAATTCACCTTTTAATCGAGACAGCGTCACTAAAAACTTGTACAAGACGAATTCGATAATGGACGGTAGGCGATTGGGTCCGAACTTGGAAATAACTTTGGTAGGACCGAACAGCAAAAATAATTATCCTCGATCGCAacaaaaaatgtacaataatTATCAGACGGGTACGTCTACGCAAGTACCACCGCAAAAACGAGTCTCGACCGACTGTTACGTTCCGTCAAAGTTGACTAAAAACGAAGAAAACGGAAAATacaaaccaaaacaaaacatGGATTATAATTTGATGATGAAACACGAATCAGCGAAACCGGCGGCGTCTAGTCGACAACCGCAgcaaaatttaaaacaatattcgAATACTTTACCGGCTTTTCCGCCTTATTTAACGCAATTTTACGACCATACTAGTAAAAATATGCCGCCCTATCTTCCTTTCATAGATCCAACTATGTATTACACTGCAGCAATGCAGAATTTATATTCCACCAACAATTTAAACTCCGCGCCGATCTTACCGATGCCCACGCCTGAACAACTCAAACTGTACGCGGAGTTGATGGCCCACGGTAGGATGCCTTATCCTTTTCAAATGCCGCAGGATACTAGCAAGATGAAGAAGCAGTAA
- Protein Sequence
- MGNSDIQFVGGACGQHGPYTFYKAFKYNKDGICRIVTLSEFFLVKMWRDSDLLCIGELQLLWIDKHSEQVLASLRLYFLPENTPEGRLDHGEDEVLAITEKVVIRVEDLITLITEEAEWTWGRLAKSEQDMKQSDENPNDDDVPPRKPAGLSFTINETLLDYTDVETERKHLDNSKTMKDPHVVILSFPKYCRYRAMMKRLDGVEDIYLKYKIVNALGGFYVIHPNTRVLFCRDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSVSPGSESNESECSVTTSTKAEAKNNAQEGTESAPRRSTRCHENNENKEFVRKLGAFMKSNRTPIGRIPSLGYKELNLHEFFTRVQKLGGYDCVTTNRLWKSIFDEMSGHQNSTSAATIIRRHYERFLLPYERHQRGEDYKTLPGSERRRLKHKRGSGSLSDAESSSDSSIPSTSRKLSISENVTDTKEIVKPEGKPSSLRSVRVKPDRQKDKQLQSEKDNVNNNNNNEKWQPSIEQPEDGNDVKKVEKLVIKTENMTVKTELSTVITQTHPVKIEYDSVKAETEEKNGQIKIENTNLPVTISVKIETNLKTETNPIKLEETSSVKIENSPIPIKTEETENKEEIKIEMEKTETAATPVAVKVPVSEAMSPIEGKENIPLIKSPEKNLEIIVPYRPKAPETASLEPESYKNNFIHEFKKRKLDILKEGGLEVTPVRTSTQKDGRPSVIQTPPVQLIPKPPKSETMPPPTSVPLKRTHITVPQTLNISQVHSTPTKKSSVPSSSFVNGASPPKVVQSRSIYTYSEKTIYGNPKDILNPIVHAPKFVDSVLRQPGGDPVDLSVNSPQKPIVEIMRIPQTSSNSPFNRDSVTKNLYKTNSIMDGRRLGPNLEITLVGPNSKNNYPRSQQKMYNNYQTGTSTQVPPQKRVSTDCYVPSKLTKNEENGKYKPKQNMDYNLMMKHESAKPAASSRQPQQNLKQYSNTLPAFPPYLTQFYDHTSKNMPPYLPFIDPTMYYTAAMQNLYSTNNLNSAPILPMPTPEQLKLYAELMAHGRMPYPFQMPQDTSKMKKQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00911606;
- 90% Identity
- iTF_00910303; iTF_00911606;
- 80% Identity
- -