Lcra000132.1
Basic Information
- Insect
- Lochmaea crataegi
- Gene Symbol
- Jra
- Assembly
- GCA_947563755.1
- Location
- OX387431.1:1920421-1921125[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6 3e+04 -3.4 0.0 21 36 11 26 9 30 0.65 2 2 1.2e-16 6.3e-13 50.1 8.0 2 65 141 204 140 204 0.95
Sequence Information
- Coding Sequence
- ATGAGCCAGGATCAAAATGCCACCTTTAAAAACATGAAAAGAAATCTCACACTAGATTTGAACCAAAAGAAGCTAAACTTACCTGCTTCTAGTGGGTTATTATCCTCTCCAGATTTAAATTTGCTCAAAGTAGATACTCCCGAACTAGAAAATATGATTTTGGCTAACGGTATTGGGCAAACTCCTACACCTTCATTATTATTTCCTAGAGCCGTTACAGCTGAACAAGAGAAATTTGCTGGTGGATTTGTCGAAGCTCTGAGTCACTTGCATAATAGTAATTCACAACAAGGCTCTGATAGTAACAGCAGCACTATATATAACGACTCTTTTTTACCACACATTAAAGAAGAGCCCCAAACAGTACCTAGTCTTAATCAATCTCCTCCAATGTCTCCTGTTAATATGGAATATCAAGAACGGATTAAATTGGAAAGAAAAAGGCAAAGAAATCGTCTTGCAGCATCAAAATGCAGATCCAGAAAGCTAGAAAGGATCTCAAAGTTGGAAGATAAAGTGAAGATTTTAAAAAGTGAAAACGTTGAACTTGGAAATATTGTTAACCAGTTAAAAGAAACAGTGGGACTTTTAAAACTCGAAGTTATTGAACATAATAAAGCCGGTTGTCCCATTATTAACACATATTAA
- Protein Sequence
- MSQDQNATFKNMKRNLTLDLNQKKLNLPASSGLLSSPDLNLLKVDTPELENMILANGIGQTPTPSLLFPRAVTAEQEKFAGGFVEALSHLHNSNSQQGSDSNSSTIYNDSFLPHIKEEPQTVPSLNQSPPMSPVNMEYQERIKLERKRQRNRLAASKCRSRKLERISKLEDKVKILKSENVELGNIVNQLKETVGLLKLEVIEHNKAGCPIINTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327607;
- 90% Identity
- iTF_00436226; iTF_00458614; iTF_00910262; iTF_00735228; iTF_01105312;
- 80% Identity
- iTF_00735228;