g52889.t1
Basic Information
- Insect
- Diabrotica virgifera
- Gene Symbol
- Jra
- Assembly
- GCA_003013835.2
- Location
- ML016072.1:443587-445521[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3 5.1e+04 -2.9 0.1 21 35 11 25 10 29 0.68 2 2 1.6e-15 1.1e-11 47.3 9.0 4 65 143 204 140 204 0.94
Sequence Information
- Coding Sequence
- ATGAGTCAAGATCTAAACTTATCGTTCAAAAACATGAAAAAGAACCTTACGCTTGACCTAAACCAAAAGAAGCTAACTTTGCCTACCACAAGCGGTCTATTGTCTTCCCCCGATCTCAATCTACTTAAAGTTGATACTCCAGAATTAGAGAGTATGATTTTAGCTAATGGGATGACTAACACACCAACGCCATCATTACTGTTTCCCAGAGCTGTTACAGCTGAACAAGAAAAATTTGCTGGTGGTTTTGTCGAAGCATTAAGTCACTTACACAACAGTAATTCACAGCAAGGTTCAGACAGTAATAGTAGCACAATCTACAATGATTCGTTTATACCTCATATCAAAGAAGAACCTCAAACAGTTCCTAATATGAAtcaaTCACCTCCAATGTCTCCTGTTGACATGGAATACCAAGAACGAATGAAACTAGaaagaaaaagacaaagaaatcGTCTTGCTGCCTCTAAATGCAGATCAAGAAAACTGGAAAGGATTTCGAAATTGGAAGACAAAGTTAAATTGCTAAAATGTGAAAATATAGAACTTGGATCTATTGTTAATCAACTCAAAGAAACTGTAGGACTTCTTAAACTTGAGGTCATTGAACACAATAAGGCCGGTTGTCCTATCATTAatatgtattaa
- Protein Sequence
- MSQDLNLSFKNMKKNLTLDLNQKKLTLPTTSGLLSSPDLNLLKVDTPELESMILANGMTNTPTPSLLFPRAVTAEQEKFAGGFVEALSHLHNSNSQQGSDSNSSTIYNDSFIPHIKEEPQTVPNMNQSPPMSPVDMEYQERMKLERKRQRNRLAASKCRSRKLERISKLEDKVKLLKCENIELGSIVNQLKETVGLLKLEVIEHNKAGCPIINMY*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327607;
- 90% Identity
- iTF_00911594;
- 80% Identity
- -