Lcap040324.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- Jra
- Assembly
- GCA_949126875.1
- Location
- OX421408.1:1536429-1537136[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3e-16 6.7e-13 50.1 8.0 2 65 141 204 140 204 0.95
Sequence Information
- Coding Sequence
- ATGAGCCAGGATCAAAATGCCTCCTTCAAAAACATGAAAAGAAATCTCACACTAGATTTGAACCAAAAGAAGCTAAATTTACCTGCTTCTAGTGGGTTATTATCCTCTCCAGATTTAAATTTGCTCAAAGTGGATACTCCTGAActagaaaatatgattttggCTAACGGTATTGGGCAAACTCCTACGCCATCATTGTTATTTCCTAGAGCCGTTACTGCTGAACAAGAGAAATTTGCTGGTGGATTTGTTGAAGCTCTGAGTCACTTGCATAACAGTAATTCACAACAAGGCTCTGATAGTAACAGTAGTACAATTTACAATGACTCCTTTTTACCACACATTAAAGAAGAGCCCCAAACAGTACCTAGTCTTAATCAAtcaCCACCAATGTCTCCTGTTAATATGGAATACCAAGAACGGATTAAATTGgaaagaaaaagacaaagaaatCGTCTAGCAGCATCCAAATGCAGATCCAGGAAGCTTGAAAGGATCTCAAAGTTGGAAGATAAAgtgaagatattaaaaagtgaaaatgtTGAACTTGGAAATATTGTTAACCAGTTGAAAGAAACAGTGGGACTTTTAAAACTCGAAGTTATTGAGCATAATAAAGCTGGTTGTCCTATTATTAACACATATTAA
- Protein Sequence
- MSQDQNASFKNMKRNLTLDLNQKKLNLPASSGLLSSPDLNLLKVDTPELENMILANGIGQTPTPSLLFPRAVTAEQEKFAGGFVEALSHLHNSNSQQGSDSNSSTIYNDSFLPHIKEEPQTVPSLNQSPPMSPVNMEYQERIKLERKRQRNRLAASKCRSRKLERISKLEDKVKILKSENVELGNIVNQLKETVGLLKLEVIEHNKAGCPIINTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00327607;
- 90% Identity
- iTF_00911594;
- 80% Identity
- -