Lcap045051.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- dsx
- Assembly
- GCA_949126875.1
- Location
- OX421409.1:15701265-15701948[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.9e-23 1.3e-18 68.2 12.2 2 47 25 70 24 70 0.97 2 2 0.18 3.5e+03 -0.4 0.0 19 32 150 163 143 164 0.74
Sequence Information
- Coding Sequence
- ATGTCAGACTCGCAggaatttgataataaaatgcAAGTAAATGCGTCTAGTACTTCAGCAACACCGAGGACCCCGCCGAATTGCGCTCGGTGCAGGAATCACAGGAAGAAAGTACTGCTTAAAGGACATAAACGCTATTGCATGTATCGTGCTTGTATATGCGAGAAATGTAGGTTAACAACAGATAGACAGAGAGTTATGGCGATGCAAACAGCTCTTAGACGCGCTCAAGCACAGGACGAAGCGATGCTAAGGAACGGTTCGCAAGATTTTCCTTTGGAACAACACACTCCTCCGTTAGTTACCCATATGAAAAAAGGCGTAGGCGTAGACTGTGATTCTTCCGGTTCTTCGCAATGCTCCGAACAACCACCTTCTACCAAATTAATGAAATTGACTCCAGTTCCATTAGGTCAACAAAGTCCGCCACTTATTACCTCATTAAAACGTACAATGAATAATTGTGATTATGCTACTTCGCATTGTACTGATCAACCGACTTCTAAAGTTGCTAAATTGACTCTAACCAGTGAAATTCCCTCAACTACGTCTGCCAACATCAACTCCATGAACGAATGCCATTCTTATTCAGAGCCTAAAGGTGAGTACCGACAAAATTCTTCATTTTTCAGGCAAACTATGGTTACCTATTTTAACTTTCATATATTCCTAGATACCATTTAA
- Protein Sequence
- MSDSQEFDNKMQVNASSTSATPRTPPNCARCRNHRKKVLLKGHKRYCMYRACICEKCRLTTDRQRVMAMQTALRRAQAQDEAMLRNGSQDFPLEQHTPPLVTHMKKGVGVDCDSSGSSQCSEQPPSTKLMKLTPVPLGQQSPPLITSLKRTMNNCDYATSHCTDQPTSKVAKLTLTSEIPSTTSANINSMNECHSYSEPKGEYRQNSSFFRQTMVTYFNFHIFLDTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105947;
- 90% Identity
- iTF_00735588;
- 80% Identity
- -