Gnym006789.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- dsx
- Assembly
- GCA_963978555.1
- Location
- OZ021704.1:43963925-43964614[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7e-23 9.6e-19 68.2 12.2 2 47 25 70 24 70 0.97 2 2 1.7 2.3e+04 -3.5 0.1 24 31 152 159 149 161 0.71
Sequence Information
- Coding Sequence
- atGTCGGACTCGCAGGAATTCGATAATAAAATGCAAGTAAATGCTTCCAGTACTTCAGCAACACCGAGGACCCCGCCGAATTGCGCTCGGTGCAGGAATCACAGGAAGAAAGTACTGCTTAAAGGACATAAACGCTATTGCATGTATCGTGCTTGTATATGCGAGAAATGTAGGTTAACAACAGATAGACAGAGAGTTATGGCGATGCAAACGGCTCTTAGACGTGCTCAGGCACAGGATGAAGCGATGCTAAGGAATGGTTCGCAGGATTTTCCCTTGGAACAGCACACTCCCCCGTTAGTTACCAATATGAAAAAACGAGTAGACTGTGAATCTTCCGGTTCTTCGCAATGCTCAGAACAAGCACCTTCTaccaaattaatgaaattaactCCAGTTTCATTAGGTCAACAAAGTCCTCCGCTTATTACCTCATTAAAACGTAGAATCGATTGTGATTATGCTACTTCACATTGTATCGAGCAACCGACTTCCAAAGTTGCTAAATTGACTCCAACCAGTGAAATTCCCTCAACTACGTCTGCCAACATCAACTCCATGAACGAATGCCATTCTTACTCAGAGCCTAAAGGTGAGTCCTGTCAAAAATCTTCATTTTTTAGGAAAACTATGGTTACTTATCTCAACTTTTTTGGACACCATTTAACTTTCTACCTTGATAAAGAGTGA
- Protein Sequence
- MSDSQEFDNKMQVNASSTSATPRTPPNCARCRNHRKKVLLKGHKRYCMYRACICEKCRLTTDRQRVMAMQTALRRAQAQDEAMLRNGSQDFPLEQHTPPLVTNMKKRVDCESSGSSQCSEQAPSTKLMKLTPVSLGQQSPPLITSLKRRIDCDYATSHCIEQPTSKVAKLTPTSEIPSTTSANINSMNECHSYSEPKGESCQKSSFFRKTMVTYLNFFGHHLTFYLDKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01105947;
- 90% Identity
- iTF_00910771; iTF_00911955;
- 80% Identity
- -