Lcap022373.1
Basic Information
- Insect
- Lochmaea capreae
- Gene Symbol
- Kdm5
- Assembly
- GCA_949126875.1
- Location
- OX421402.1:9595614-9609903[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-25 2.3e-21 77.6 0.0 2 89 117 200 116 200 0.94 2 2 0.042 3.1e+02 3.5 0.0 28 80 1243 1294 1224 1301 0.71
Sequence Information
- Coding Sequence
- ATGACTACTAAAGTGGACAAACAAATAAATGGTAATAATGGTATAAGAAACCACCCTAGCTGCTCCAAAAGCTctccaataaaaaataatgatcacTATTCTCAGTACAAGGAAGaaacttttaaatttgaaataccTCCAGAAGCCCCAGTATTTTATCCTACAGAAGAAGAATTTCAAGATCCTCTTGCTTACATAGCTAAAATAAGACCAATCGCCGAAAATACAGGAATATGTAAAATTAAACCACCATCACACTGGCAGCCTCCATTTGCAGTTGATGTAGATAAATTAAGATTCACTCCTAGAATCCAACGATTAAATGAATTAGAAGCAAAAACTAGGGtgaaacttaactttttagatcAAATAGCTAAATTTTGGGAACTGCAGGGATCTTCACTTAAGATTCCTATGGTAGAAAGGAGAGCCCTAGATTTATATACATTACATAGAGTGGTACAAATAGAAGGTGGATTTGATAATGTGACAAAAGAGAGAAAATGGTCTAAAGTATCCCAAAGAATGGGTTACCAAGCCGGTAAAAGTATAGGAACAATCCTAAAAACCCATTATGAAAGACTCCTTTTTCCATTTGATGttttcaaagctggaaaaacaGTAGATGTGaaattggaGGAAACTACTGATGATATAGAGAAAGCAGATAAAGATTATAAGCCACATGGTATTGTTAGTCGCATGCAAATCAAACCACCACCTGAAAAAAATGCAAGAAGATCGAAAAGATTTGATATCAATGATGAAAGCAAGACTGAAaacTTAGCACTTAAGATAAAGGAAGAAAAGTCAGAGGATGAGGATGCAGGAAATAAAGAACTGAGACGTTTACAATTTTATGGAGCAGGTCCAAAAATGGCTGGATATGACGAGAAAAAAGAACCTAAACCAAGGcataaaattgtgaaatatgATTTCGATCCACTTGCGAAATATGTTTGTCATAATTGCAACCGAGGAGATGCAGAAGAATACATGCTGCTTTGTGATGGATGTGATGACAGTTACCACACTTTTTGTTTAATGCCACCTCTAACTGAAATCCCAAAAGGTGATTGGAGGTGTCCTAAATGCGTAGCTGAAGAAGTTTCAAAACCTATGGAAGCCTTCGGATTTGAACAGGCCCAGAGAGAGTACACTTTACAACAATTTGGGGAAATGGCAGATCAGTTTAAATCGGAGTACTTCAATATGCCAGTCCATATGGTACCAACTGGTACTGTGGAACGAGAATTCTGGAGAATTGTTTCCTCCATTGATGAAGATGTCACCGTGgaatatggtgcagacttacaTACTATGGATCATGGTTCTGGTTTCCCAACTAAATCATCCACCAACCTTTTTCCAGGTGACAAAGAATACGCTGAATCTAGTTGGAATTTAAACAATTTGCCAGTGCTGGAAGGTTCTGTACTGGGATATATTAATGCTGATATTTCAGGAATGAAGGTTCCATGGATGTATGTTGGAATGTGCTTCGCTACATTTTGTTGGCATAATGAAGATCACTGGAGTTATTCCATTAACTACTTGCATTGGGGAGAAGCGAAAACTTGGTATGGAGTTCCtggtagtaaagcagaatcttTTGAAGAAACTATGAAGTCAGCGGCACCAGAATTATTTCACTCCCAGCCTGATTTGCTTCATCAATTGGTTACTATAATGAATCCAAATATTTTGATGAATGCAGGAGTGCCGGTTTATAGAACTGACCAAAATGCTGGGGAGTTTGTTGTCACTTTTCCTAGGGCGTACCATGCAGGTTTCAACCAAGGATACAATTTTGCCGAAGCTGTCAACTTCGCTCCTGCTGATTGGTTGCGAATGGGTCGTGAATGTGTGTTACACTATTCTCACTTGAGAAGATTTTGCGTTTTTTCGCATGACGAACTTGTTTGCAAAATGGCTTTGGATCCAGAAAAATTAGACTTGACAATAGCAGCTGCTACTTACCAAGACATGTTGGTAATGGTTGATACAGAAAAAAGATTGAGGAAAACGTTACTAGATTGGGGTGTAACCAATGCCGAAAGAGAAGCTTTTGAACTTCTACCCGACGATGAGCGACAATGCGAAGTTTGCAAAACTACCTGTTTTCTATCTGCGATGACTTGCAAATGTTCCAGTGACGTGCTAGTTTGCTTGCGacattataaaaatttgtgcGAATGCCCTCCACAGAATAGAACCTTAAGATACAGATACACTTTGGATGAACTGCCTGTTATGTTGAAAGCTTTAAAATTAAAAGCAGAATCTTTTGATCATTGGGTGTCTAGAGTGAAAGATGCTTTAGATCCAAAAACACCAAAGACTTTAAATTTGTCTGATCTAAAAGAATTACTTAGTGAAGCTGATGGTAAGAAATTTCCTAAATGTGATTTACTACAGACATTAACTAGTGCCGTAGAAGATGCTGAAAAGTGTGCCAGTGTTATTCATCAGTTAGATTTGAATAAAATGCGTACACGAACTAGAAATTCTAATGATACCAAATACAAACTGACTGTGGAAGAACTTACTTTGTTCTGTGAAGAAATCGATAGTCTCGCCTGTATTTTAGAAGAAGCTAAAAGTATTAGAGAATTGTTGCAACAAACGAGAAAATTTGAGGAAACGAGCGAAAAGTTTTTGGCTTTACCGCTCTCGGAATGTTCCATCTCTGAATTGGAAGTTTGCCATTCCCATGGAAGTGGACTGTGCATAGAACTTCCAAATCTGAGACTAGTAGGTACGAGATTGAAACAGTGCCAATGGATGCAAAGTGTAGATAACTATAAGAGTAAAACTGATGTTATGGGATTAGAtgcaattaaaaatttaattcaagaaGGAATTCTGCTACCGCCACACCCTGAATTAGAAGAAGAATTGTCCAAATTACAAGGAATTTTACAAACCAGTGAAGAATGGGAAGAGCAAGCTGCAGAAATTCTCAAATCAGAAGATAATAATGTATTGATTCAAGTAGATAAACTCTTGAAAGAAGCTTCTAAAATATCTTGTTTCCTACCTACAGAAGGTCATTTGTTTGACTCCATGAAGAAAGCTAGAGATTGGTTGAGATTGTTGGAAGAAATGAATTCTGCTGAATACTATCCTTATTTCAGTGCAATGGAAGAATTAATAAAGAAAGGAAGATCTTTAGCTTTACATCTAATTGAAGTTGAAAGAATGAATGATTATTTGGTTCTTGCTACAGGATGGAAAGAGAGAACAAGCAGAGCGTTCCTAAGGAAAAATTCTTCTTGTACCTTAATGGAAGCTTTATCTCCAAGAATTTCCATGTCTAATGGTATTAAAACAAGTAAAAAGTGTAAAACTATTGAAGAAGACAATTCCAGTATTTCATTAACCAATGCGATGGATCCTGCAGCTGTAGTAGCAATTTTTAAGGATGCTGAAGACACCGAGATGTCTTTACTAAAAAAACTAAGGGCCAGCAATATGGCTAAAAGTTTAGATCCGAGCGATAACAGCACTTTCTGTATTTGCGGAAGAGGTGTCTATGGGATTATGATGCAGTGTGAATTATGCAAAGATTGGTTTCATTCTGCTTGTACGCAACTTCCTAAAGTATCCACCACAAAGTTCAAAGGCAATTTTACCTCTGTCGCCCTCCACATGGGCTTTAAAGACTGTAAATTTTTATGTCCGAATTGTCAACGTACAAAACGTCCTCGATTAGACATTATTTTAGGCCTACTTATGtctttacaaaaattatatgttaGAGTACCTGAAGGTGAAGCCTTGCAGTGTCTTACCGAACGCGCTATGAATTGGCAAGATAGAGCCAGGCAACTTTTACAGCATCCCGAACTAGAAGTAGCTAAAAATAAGTTAGCGATGTGTAGTCAAAAATATAATGAAGCAGCTGCGAGACAAAGGACTGAAAAAATTATATCGACGGAACTAAAACGAGCTTCAAAAAATCCTGAATTGCACCAAAGAGTACAAGAAATCACGCCTTACAGCGGTGTGGTTACCGAAGATGGTGTAACTTGTGATAGTGGAATTAACGATTCAGATGATGCTTCCAGAGATTCTCGAGAATCTGACGATCGAATGGGTGAACATGCATATTCACTACATTTACCCAAGGTGGGAGACGAAGACTACACCCTTCTCTTGAATACAGATATCAGAAAACAACTAGAAGAACTGCTCACCGAAGGGGATTTGCTAGAAGTGTCATTAGATGAAACTTTCGCTTTGTGGAAGTTATTGCAAGCATCACGTGATCCTGAAAAGGAGCCAATATTCATCGACTTTGATGCACATATGAAAAACACTGCAAAGAAGAGAGGTCGTAAGAGATTGTCAGAAGAATCCGATACCAAGAAAGTGTCGAAAACTGTGAAGGTGGAAGCAGAGAAAAAAATACGCGGACGTAAGATAAAAACCAGTAAAGAAGTTGGTAAAAAACGAGCGTATAAGAAACGCGTAGGCAGATGCCAGTCTACAGGTTCGGAtagtgatgatgatgatgacgaaAGCTGTgccgcaaacggctgccaaaaACCTACTGGCCAAAACGTCGACTGGGTTCAGTGTGACGGCGGCTGTGAACAGTGGTTTCATATGGCTTGCGTCGGGCTATCCGCTGAGGATATTAACGAAGACGAAGATTACATTTGTATGACCTGTTCAAAAAGCACTACCTATGAAAATTTGGACAGTCGTTCCAGTAGTCCCAGATCACCGGATTCTACGCAACCTTCCACATCAAAAGATACTTCATAG
- Protein Sequence
- MTTKVDKQINGNNGIRNHPSCSKSSPIKNNDHYSQYKEETFKFEIPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPSHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFDNVTKERKWSKVSQRMGYQAGKSIGTILKTHYERLLFPFDVFKAGKTVDVKLEETTDDIEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFDINDESKTENLALKIKEEKSEDEDAGNKELRRLQFYGAGPKMAGYDEKKEPKPRHKIVKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSTNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAESFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCKCSSDVLVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVSRVKDALDPKTPKTLNLSDLKELLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRKFEETSEKFLALPLSECSISELEVCHSHGSGLCIELPNLRLVGTRLKQCQWMQSVDNYKSKTDVMGLDAIKNLIQEGILLPPHPELEEELSKLQGILQTSEEWEEQAAEILKSEDNNVLIQVDKLLKEASKISCFLPTEGHLFDSMKKARDWLRLLEEMNSAEYYPYFSAMEELIKKGRSLALHLIEVERMNDYLVLATGWKERTSRAFLRKNSSCTLMEALSPRISMSNGIKTSKKCKTIEEDNSSISLTNAMDPAAVVAIFKDAEDTEMSLLKKLRASNMAKSLDPSDNSTFCICGRGVYGIMMQCELCKDWFHSACTQLPKVSTTKFKGNFTSVALHMGFKDCKFLCPNCQRTKRPRLDIILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEVAKNKLAMCSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEITPYSGVVTEDGVTCDSGINDSDDASRDSRESDDRMGEHAYSLHLPKVGDEDYTLLLNTDIRKQLEELLTEGDLLEVSLDETFALWKLLQASRDPEKEPIFIDFDAHMKNTAKKRGRKRLSEESDTKKVSKTVKVEAEKKIRGRKIKTSKEVGKKRAYKKRVGRCQSTGSDSDDDDDESCAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICMTCSKSTTYENLDSRSSSPRSPDSTQPSTSKDTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386968;
- 90% Identity
- iTF_00735261; iTF_00458646; iTF_01046890; iTF_00791860; iTF_00025816; iTF_00386968;
- 80% Identity
- -