Basic Information

Gene Symbol
Kdm5
Assembly
GCA_951812935.1
Location
OX638364.1:16912469-16927820[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.1e-25 2.7e-21 76.7 0.1 2 89 117 200 116 200 0.94
2 2 0.062 2.4e+02 3.1 0.0 26 70 1241 1287 1224 1301 0.70

Sequence Information

Coding Sequence
ATGACCACTAAAGTCGAAAAACAAATTAATGGTAGTAATGGTATAAAAAGCCACCCAGGAAGTTCAAAAAGTTCTCCAGTTAAATCTAATGACCACTATTCCCAGTACAAAGAAGATACTTTTCAATTTGAAATTCCTCCAGAAGCCCCAGTATTTTACCCCACAGAAGAAGAATTTCAAGATCCTCTTGCTTACATTGCAAAAATAAGGCCGATTGCAGAAAATACAggaatatgtaaaataaaaccaCCATCAcaCTGGCAGCCACCTTTTGCTGTAGATGTAGACAAATTAAGATTTACACCTAGAATTCAGAGACTTAATGAATTAGAgGCAAAAACTCGTGTAAAACTAAACTTCCTAGACCAAATAGCCAAATTTTGGGAGCTACAAGGTTCCTCACTTAAAATTCCCATGGTAGAAAGAAGAGCACTAGATTTATATACTTTACATAGGGTGGTACAAATTGAAGgtggatttgaaaatgtaactaaagaaagaaaatggTCAAAAGTATCACAAAGAATGGGTTATCAAGTTGGCAAAAGTATTGGTACAATACTTAAAACTCATTATGAAAGACTTCTATTTCCATTTGATGTTTTCAAAGCTGGTAAAACTGTTGATGTGaaattggaGGAAAACTCTGATGATGTGGAAAAAGCAGATAAGGATTACAAACCTCATGGTATTGTTAGTCGTATGCAAATTAAACCACCACCAGAGAAAAACGCCAGGAGGTCAAAGAGAtttgataataatgatgaaagcAAGACTGAAAATTTAGCACTTAAGATTAAGGAAGAAAAATCAGAGGATGAAGAAGGTGGGAATAAAGAATTAAGGCGTCTTCAGTTTTATGGGGCTGGACCAAAAATGGCAGGGTATGATGAAAAGAAAGAACCAAAACCGAGAAACAAATCAGTCAAATATGATTTTGATCCACTAGCCAAATACGTTTGCCACAACTGTAATCGTGGGGATGCAGAAGAATACATGTTGTTATGTGACGGGTGTGATGACAGTTACCATACCTTTTGCCTGATGCCGCCTCTTTCAGAAATACCAAAAGGAGATTGGAGATGTCCAAAATGTGTAGCTGAAGAAGTTTCAAAACCAATGGAAGCTTTTGGTTTCGAACAAGCTCAAAGAGAGTATACTCTTCAACAATTTGGAGAAATGGCTGATCAGTTTAAATCAGAATATTTCAATATGCCTGTACATATGGTTCCAACGGGCACAGTGGAACGAGAATTTTGGAGAATCGTGTCTTCCATTGACGAAGACGTAACTGTCGAATATGGGGCTGATTTACATACCATGGATCACGGGTCTGGCTTTCCCACGAAGTCTTCTAGTAATCTTTTTCCTGGTGATAAAGAATATGCAGAATCCAGctggaatttaaataatttgccaGTTCTGGAAGGATCTGTATTAGGTTATATCAACGCCGATATATCTGGAATGAAGGTGCCTTGGATGTATGTTGGCATGTGTTTTGCCACATTCTGTTGGCACAATGAAGACCATTGGAGCTACTCCATTAACTATTTGCATTGGGGAGAAGCCAAGACTTGGTATGGTGTTCCTGGCAGCAAAGCGGAGACATTTGAAGCTACAATGAAATCAGCAGCTCCCGAGTTATTCCATTCTCAGCCAGATCTCTTGCATCAATTAGTAACAATTATGAATCCGAATATTTTAATGAACGCTGGTGTTCCTGTATACAGAACAGACCAACATGCAGGAGAATTCGTCATTACCTTCCCAAGAGCATATCATGCTGGATTCAACCAAGGgtacaATTTTGCAGAGGCTGTCAATTTTGCCCCTGCTGATTGGCTTCGCATGGGGAGGGAATGTGTATTACATTATTCGCATTTAAGGCGCTTCTGTGTCTTCTCTCATGACGAACTTGTATGCAAAATGGCTCTGGATCCTGAAAAATTAGACCTTACCATAGCAGCAGCAACTTATCAAGATATGTTGGTAATGGTAGATACAGAGAAACGATTAAGGAAAACTTTGTTGGATTGGggtGTTACAAACGCTGAAAGGGAAGCCTTTGAACTCCTTCCTGATGACGAGAGACAATGTGAAGTGTGTAAAACTACTTGTTTCTTGTCTGCCATGACTTGCAAATGCTCCACTGATGTCTTAGTCTGCTTAAGgcattacaaaaatttatgtgaatGTCCTCCTCAAAATAGAACTTTAAGGTACAGATACACTTTGGATGAGCTTCCTGTGATGCttaaagctttaaaattaaaagctgAATCTTTCGATCACTGGGTTGCCAGAGTAAAAGATGCTTTAGATCCAAAAACACCAAAAACTCTTAACCTGTCCGATCTAAAAGCATTGTTAAGTGAGGCTGATGGCAAGAAATTTCCTAAATGCGACTTGTTACAAACCCTGACTAGTGCTGTAGAAGATGCCGAAAAGTGTGCAAGCGTCATACACCAATTGGATCTTAATAAAATGCGTACAAGAACAAGAAATTCCAACGATACCAAATACAAGCTTACTGTTGAAGAACTTACATTGTTCTGTGAAGAAATTGATAGTCTAGCTTGTATTTTAGAAGAAGCTAAAAGTATTAGAGAATTATTACAACAAACCAGAAAATTCGAAGAGAAGAGTGCAGAATTGATGGCTTCCAGTCTAGCAGAGTGTTCAATTTCCGAGTTAGAAGCCTGTAACTCTCATGGAAATAGTCTCTGTATAGAACTTCCAAATTTAAGATCTATAGGTACAAGACTAAAACAGTGCCAGTGGCTACAGAGTGTGGagaattataaaagtaaaacagATGTTATGGGCCTTGATGCTATTAAAACTATAATTCAAGAAGGTATTCTGCTGCCTCCTCACCCAGAAGTAGAAGAAGAGTTATCAAAACTGCAAGGTATTTTACAAACCAGTGAGGAGTGGGAAGATCAAGCTGCAGAAATTCTAAAATCGGAAGAAAATAATGTACTAATTCAAGTGGATAAATTACTTAAAGAAGCTTCAAAAATATCGTGTTTTCTGCCTACAGAAGGACATTTATTTGATTCTATGAAGAAAGCCAGAGATTGGCTAAGAATGTTGGAAGAAATGAACTCTGCGGAGTATTATCCTTATTTTAGTGCAATGGAAGAGCTCATCAAAAAAGGCCGCGGACTAGCTCTTCATTTAGTAGAAGTAGACAGAATGAACGATTATTTAGTTCTTGCAACTGGATGGAAAGAAAGAACAAGCAAGGCTTTTCTCCGTCGCAATTCTACTTGCACTTTAATGGAAGCTCTATCTCCTAGAACTTCACTTTTAAATGGGACAAAACCACCaaagaaaggaaaaattaatGAAGATGAAAACAATGCTATTTCATTGACGAACGCAATGGACCCCGCTGCTGTCGTAGCAGTTTTTAAAGACGCTGAAGATATGGAAATGGCGATGCTAAAAAAACTCAGGACGACTAACGTGGCTAAGAGTTTAGATCCCAACGACAATAGCACCTTCTGTACGTGCGGAAGGGGTGTATCGGGCGTTATGATGCAATGTGAATTATGCAAAGACTGGTTTCATTCTACTTGTACGCAGCTTCCAAAAGTATCTAGCACTAAGTTCAAAGGAAACTTTGGCACTGTTGCGTTACACATGGGTTTTAAAGACTGCAAATTCTTATGTCCAAATTGTCAACGTACAAAACGTCCACGGTTAGACGTCATTCTAGGCCTTCTTATgtctttacaaaaattatacgTTAGGGTACCTGAAGGAGAAGCCTTGCAATGTCTCACCGAGCGTGCTATGAACTGGCAGGATAGAGCGAGACAACTTTTGCAACACCCTGAATTGGAAATTGCGAAGAATAAATTATCCATGTTTAGCCAAAAATATAACGAAGCAGCTGCGAGACAACGAACTGAAAAGATAATATCGACAGAATTGAAACGTGCTTCTAAAAACCCTGAATTGCATCAAAGGGTTCAAGAAATCGCTCCATATAGCGGGGTTACTGAAGAAGGTGTGACCTGTGATAGCGGTATCATTGATTCCGACGACGCTTCCCGAGATTCTCGCGAATCAGATGATAGGATGGGCGAACACGCTTATTCTCTACATTTACCTAAAGTTTGCGATGGAGAAGATTACTCTCTACACTTGAATTCAGACATTAGACGACAACTAGAAGATCTTCTTACTGAAGGTGACCTATTAGAAGTTTCATTGGACGAGACATTTGCATTATGGAAATTACTACAAGCAACTAGAGATACTGAGAAAGAACCAATACTAATCGATTTTGATgCTCACATGAAAAATACACCTAAGAAACGAGGTCGTAAGCGTCTTTCTGAAGAAACAGACATCAATAAATCAAAAGTGACAAAAGCTGTTAAGATGGAGGGTGAAAAGAAAATCCGTGGCAGGAAGGTCAAAACAAGTAAAGAAGTTGGCAAAAAACGAACCTACAAAAAACGTCTAGGACGTGCCCAATCTACTGCCTCAGATAGCGACGATGACGAGGACGATGAAACTTGTGCTGCGAACGGCTGCCAAAAACCAACTGGACAAAATGTTGACTGGGTGCAATGTGACGGTGGGTGCGAACAGTGGTTCCATATGGCTTGTGTCGGACTCTCGGCAGAAGACATTAACGAAGATGAAGATTATATTTGCATCACATGTTCAAAAAGTACCACCTATGAGAATTTGGACAGCCGATCCAGTAGTCCCAGATCCCCAGATTCGACACAGCCTTCCACGTCAAGAGATGTTTCTTAG
Protein Sequence
MTTKVEKQINGSNGIKSHPGSSKSSPVKSNDHYSQYKEDTFQFEIPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPSHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFENVTKERKWSKVSQRMGYQVGKSIGTILKTHYERLLFPFDVFKAGKTVDVKLEENSDDVEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFDNNDESKTENLALKIKEEKSEDEEGGNKELRRLQFYGAGPKMAGYDEKKEPKPRNKSVKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAETFEATMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCKCSTDVLVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVARVKDALDPKTPKTLNLSDLKALLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRKFEEKSAELMASSLAECSISELEACNSHGNSLCIELPNLRSIGTRLKQCQWLQSVENYKSKTDVMGLDAIKTIIQEGILLPPHPEVEEELSKLQGILQTSEEWEDQAAEILKSEENNVLIQVDKLLKEASKISCFLPTEGHLFDSMKKARDWLRMLEEMNSAEYYPYFSAMEELIKKGRGLALHLVEVDRMNDYLVLATGWKERTSKAFLRRNSTCTLMEALSPRTSLLNGTKPPKKGKINEDENNAISLTNAMDPAAVVAVFKDAEDMEMAMLKKLRTTNVAKSLDPNDNSTFCTCGRGVSGVMMQCELCKDWFHSTCTQLPKVSSTKFKGNFGTVALHMGFKDCKFLCPNCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEIAKNKLSMFSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEIAPYSGVTEEGVTCDSGIIDSDDASRDSRESDDRMGEHAYSLHLPKVCDGEDYSLHLNSDIRRQLEDLLTEGDLLEVSLDETFALWKLLQATRDTEKEPILIDFDAHMKNTPKKRGRKRLSEETDINKSKVTKAVKMEGEKKIRGRKVKTSKEVGKKRTYKKRLGRAQSTASDSDDDEDDETCAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSKSTTYENLDSRSSSPRSPDSTQPSTSRDVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_00910300;
80% Identity
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