Gnym000489.1
Basic Information
- Insect
- Galerucella nymphaeae
- Gene Symbol
- Kdm5
- Assembly
- GCA_963978555.1
- Location
- OZ021704.1:4235008-4242584[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-25 1.6e-21 77.6 0.0 2 89 117 200 116 200 0.94 2 2 0.053 2.2e+02 3.5 0.0 28 80 1243 1294 1224 1301 0.71
Sequence Information
- Coding Sequence
- ATGACTACTAAAGTGGACAAACAAATAAATGGTAATAATGGTATAAGAAACCACCCTAGCTGCTCCAAAAACTCCcctataaaaaataatgaacacTATTCTCAGTATAAGGAAGatacttttaaatttgaaataccTCCAGAAGCCCCAGTATTTTATCCCACAGAAGAAGAATTTCAAGATCCTCTTGCTTACATAGCTAAAATAAGACCAATCGCCGAAAATacaggaatatgtaaaattaaaCCACCATCACACTGGCAGCCTCCATTTGCAGTTGATGTAGATAAATTAAGATTCACTCCTAGAATCCAACGATTAAATGAATTAGAAGCTAAAACTAGGGTGAAACTTAACTTTTTAGATCAAATAGCTAAATTTTGGGAACTGCAGGGTTCTTCACTTAAGATTCCTATGGTAGAAAGGAGAGCCCTAGATTTATATACTCTACATAGAGTGGTACAAATAGAAGgtGGATTTGATAATGTGACAAAAGAAAGAAAATGGTCCAAAGTATCTCAAAGAATGGGTTACCAAGCCGGTAAAAGTATAGGGACAATCCTAAAAACCCATTATGAAAGACTCCTTTTTCCATTTGATGTTTTTAAAGCTGGAAAGACAGTAGATGTGaaattgGAGGAAACTACTGATGATATAGAAAAAGCGGATAAAGATTATAAGCCACATGGTATTGTTAGTCGTATGCAAATTAAACCACCACCTGAAAAAAATGCAAGGAGATCGAAAAGATTTGATATCAATGATGAAAGCAAGACTGAAaaCTTAGCACTTAAGATAAAGGAAGAAAAGTCAGAGGATGAGGATGCTGGAAATAAAGAACTGAGACGTTTACAATTTTATGGAGCTGGTCCAAAAATGGCTGGATATGATGAGAAAAAAGAACCTAAACCAAGGCATAAAATTGTGAAATATGATTTCGATCCACTTGCAAAATACGTTTGTCATAACTGCAACCGAGGAGATGCAGAAGAATACATGCTGCTTTGTGATGGATGTGATGACAGTTACCACACTTTCTGTTTAATGCCGCCTCTAACTGAAATTCCAAAAGGTGATTGGAGGTGTCCTAAATGTGTAGCTGAAGAAGTTTCAAAACCTATGGAAGCCTTTGGATTTGAACAGGCCCAGAGAGAGTATACTTTACAACAATTTGGGGAAATGGCAGATCAGTTTAAATCTGAGTACTTCAATATGCCAGTCCATATGGTACCAACTGGTACTGTGGAACGTGAATTCTGGAGAATTGTTTCCTCGATTGATGAAGATGTCACTGTGGAATATGGTGCAGATTTACATACTATGGATCACGGTTCTGGTTTCCCAACTAAATCATCCACCAACCTTTTTCCAGGCGACAAAGAATATGCTGAATCTAGTTGGAATTTGAACAATTTGCCAGTGCTGGAAGGTTCTGTACTGGGATATATTAATGCTGATATTTCAGGAATGAAGGTTCCGTGGATGTATGTTGGAATGTGCTTTGCTACATTTTGTTGGCATAACGAAGATCACTGGAGTTATTCCATTAATTACTTGCATTGGGGAGAAGCGAAAACTTGGTATGGAGTTCCTGGTAGTAAAGCAGAATCTTTTGAAGAAACTATGAAGTCGGCAGCACCAGAATTATTTCAATCCCAGCCTGATTTGCTTCATCAATTGGTCACTATCATGAATCCAAATATTTTGATGAATGCTGGAGTGCCAGTTTATAGAACTGACCAAAATGCTGGGGAGTTTGTTGTGACATTTCCAAGAGCATACCACGCAGGTTTCAACCAAGGGTATAATTTTGCCGAAGCTGTCAACTTCGCTCCAGCTGATTGGTTGCGAATGGGGCGTGAGTGTGTGTTACACTATTCTCACTTGAGAAGATTTTGCGTTTTTTCGCACGACGAACTTGTATGCAAAATGGCTTTGGATCCCGAAAAATTGGACTTGACAATAGCAGCTGCTACTTACCAAGACATGTTGGTAATGGTCGATACAGAAAAAAGATTGAGGAAAACATTACTAGATTGGGGTGTAACAAATGCCGAAAGAGAAGCCTTTGAACTTCTACCCGACGACGAGCGACAATGCGAAGTTTGCAAAACAACCTGTTTTCTATCCGCGATGACTTGCAAATGTTCCAGTGACGTGCTAGTTTGCTTGCGacattataaaaatttgtgcGAATGCCCTCCACAGAATAGAACGTTAAGATACAGATACACTTTGGACGAGCTACCTGTTATGTTGAAAGCTTTAAAATTAAAAGCAGAATCTTTTGATCATTGGGTATCTAGAGTGAAAGATGCTTTAGATCCAAAAACGCCAAAGACTTTAAATTTGTCCGATTTAAAAGAATTACTTAGTGAAGCTGATGGTAAGAAATTCCCTAAATGTGATTTACTACAGACATTGACTAGTGCCGTAGAGGACGCTGAAAAGTGTGCTAGTGTTATTCATCAGTTAGATTTGAATAAGATGCGTACACGAACTAGAAATTCTAATGATACCAAATACAAATTGACTGTTGAAGAACTTACTTTGTTCTGTGAAGAAATCGATAGTCTGGCCTGTATTTTAGAAGAAGCTAAAAGTATTAGAGAATTGTTGCAGCAAACAAGGAAATTTGAGGAAACCAGCGAAAAGTTTTTGGCTTTACCGCTATCAGAATGTTCCGTCTCTGAATTGGAAGCTTGCCATTCCCACGGAAGTGGATTGTGCATAGAACTTCCAAATCTGAGACTTGTAGGTACGAGATTAAAACAGTGCCAATGGATGCAAAGTGTAGATAACTATAAGAGTAAAACTGACGTTATGGGATTAGAtgcaattaaaaatttaattcaagaAGGAATTCTGCTACCACCACACCCTGAATTAGAAGAAGAATTATCCAAATTACAAGGTATTTTACAAACCAGTGAAGAATGGGAAGAGCAAGCTGCAGAAATTCTCAAATCAGAAGATAACAATGTCTTGATTCAAGTAGATAAACTCTTGAAAGACGCTTCTAAAATATCTTGTTTCCTACCAACAGAAGGTCACCTGTTTGACTCCATGAAGAAAGCTAGAGACTGGTTGAGATCGTTGGAAGAAATGAATTCTGCTGAATACTATCCTTATTTCAGTGCAATggaagaattaataaaaaaaggaagATCTTTAGCTCTACATCTAATTGAAGTTGAAAGAATGAACGATTATTTGGTTCTTGCTACAGGATGGAAAGAGAGAACAAGTAGAGCATTTCTAAGAAAAAATTCTTCTTGTACTTTAATGGAAGCTTTATCTCCAAGAATTTCCATGTCTAATGGTATTAAAACTAGCAAAAAGTGTAAAACTATTGAAGAAGATAATTCCAGTATTTCGTTAACCAATGCTATGGATCCTGCAGCTGTAGTAGCTATTTTTAAGGATGCTGAAGACACAGAGATGGCTTTACTAAAAAAACTAAGAGTCAGCAATATGGGTAAAAGTTTAGATCCGGGCGATAACAGCACTTTTTGTATTTGCGGAAGAGGTGTTTATGGCATTATGATGCAGTGTGAATTATGCAAAGATTGGTTTCATTCTGCTTGTACACAACTTCCTAAAGTATCCACCACAAAGTTCAAAGGCAATTTTACCTCTGTCGCCCTCCACATGGGCTTTAAAGACTGTAAATTTTTATGTCCGAATTGTCAACGTACAAAACGTCCTCGATTGGACATTATTTTAGGCCTACTCATGTCCttacaaaaattatatgttaGAGTACCTGAAGGTGAAGCCTTGCAGTGTCTTACCGAACGCGCTATGAATTGGCAAGATAGAGCCAGGCAACTTTTACAGCATCCCGAACTAGAAGTAGCAAAAAATAAGTTGGCGATGTGTAGCCAAAAATACAATGAAGCAGCTGCGAGACAAAGGACTGAAAAAATTATATCGACGGAACTAAAACGAGCTTCGAAAAATCCTGAATTGCACCAAAGAGTACAAGAAATCACGCCCTACAGCGGCGTGGTTACCGAAGATGGTGTAACTTGTGATAGCGGAATTAACGATTCTGATGATGCTTCCAGAGATTCTCGAGAATCTGACGATCGTATGGGTGAACATGCATATTCGCTACATTTACCCAAAGTGGGAGACGAAGATTACACCCTTCTCTTGAATACAGATATCAGAAAACAACTAGAAGAACTGCTCACCGAAGGGGATTTGCTAGAAGTATCATTAGATGAAACGTTTTCTTTGTGGAAGTTATTGCAAGCATCTCGTGATCCTGAAAAGGAGCCAATATTTATCGACTTTGATGCACATATGAAGATCACTGCAAAGAAGAGAGGTCGTAAGAGACTGTCAGAAGAATCCGATAGCAAGAAAGTGCCGAAAACTGTGAAGGTGGAACCGGAGAAAAAAATACGCGGACGTAAGATAAAAACAAGTAAAGAAGCTGGTAAAAAACGAGCGTATAAGAAGCGTGTAGGTAGATGCCAGTCTACAGGTTCGGATAGtgatgatgatgacgatgacGAAAGCTGTGCCGCAAACGGCTGCCAAAAACCAACTGGTCAAAACGTCGACTGGGTTCAGTGCGACGGCGGCTGTGAACAGTGGTTTCATATGGCTTGCGTCGGGCTATCAGCTGAGGATATTAACGAAGACGAAGATTATATCTGTATAACCTGTTCAAAAAGCACTACGTATGAAAATTTGGACAGTCGTTCCAGTAGTCCCAGATCGCCGGATTCTACGCAACCTTCCACTTCTAAAGATACTTCATAG
- Protein Sequence
- MTTKVDKQINGNNGIRNHPSCSKNSPIKNNEHYSQYKEDTFKFEIPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPSHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQIEGGFDNVTKERKWSKVSQRMGYQAGKSIGTILKTHYERLLFPFDVFKAGKTVDVKLEETTDDIEKADKDYKPHGIVSRMQIKPPPEKNARRSKRFDINDESKTENLALKIKEEKSEDEDAGNKELRRLQFYGAGPKMAGYDEKKEPKPRHKIVKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSTNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAESFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAMTCKCSSDVLVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVSRVKDALDPKTPKTLNLSDLKELLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRKFEETSEKFLALPLSECSVSELEACHSHGSGLCIELPNLRLVGTRLKQCQWMQSVDNYKSKTDVMGLDAIKNLIQEGILLPPHPELEEELSKLQGILQTSEEWEEQAAEILKSEDNNVLIQVDKLLKDASKISCFLPTEGHLFDSMKKARDWLRSLEEMNSAEYYPYFSAMEELIKKGRSLALHLIEVERMNDYLVLATGWKERTSRAFLRKNSSCTLMEALSPRISMSNGIKTSKKCKTIEEDNSSISLTNAMDPAAVVAIFKDAEDTEMALLKKLRVSNMGKSLDPGDNSTFCICGRGVYGIMMQCELCKDWFHSACTQLPKVSTTKFKGNFTSVALHMGFKDCKFLCPNCQRTKRPRLDIILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEVAKNKLAMCSQKYNEAAARQRTEKIISTELKRASKNPELHQRVQEITPYSGVVTEDGVTCDSGINDSDDASRDSRESDDRMGEHAYSLHLPKVGDEDYTLLLNTDIRKQLEELLTEGDLLEVSLDETFSLWKLLQASRDPEKEPIFIDFDAHMKITAKKRGRKRLSEESDSKKVPKTVKVEPEKKIRGRKIKTSKEAGKKRAYKKRVGRCQSTGSDSDDDDDDESCAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSKSTTYENLDSRSSSPRSPDSTQPSTSKDTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00386968;
- 90% Identity
- iTF_00910300;
- 80% Identity
- -