Basic Information

Gene Symbol
lolal
Assembly
GCA_947363905.1
Location
OX376208.1:8729892-8736295[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.3e-30 1.1e-27 96.9 0.1 1 94 21 110 21 111 0.95

Sequence Information

Coding Sequence
ATGGGTGATCAACAATTCTTCCTCAAATGGAATGATTTCCAGACAAATATGGTGACATCTTTCAGACATTTGAGGGATGAGAAAAGCTTCACAGACGTGACACTAGCGTGCGAGGGCCAGACATGTAAGGCACATAAAATGGTCCTGTCTGCATGTAGTCCCTACTTCAAAAGTTTATTAGAGGAGAATCCATCAAAGCACCCTATAATAATCCTGAAGGACGTCTCGTACCTGCACCTGCAAGCCATCCTGGAGTTCATGTACGCGGGAGAAGTCAACGTGTCGCAGGAGCAACTGCCCGCGTTCCTCAAGACGGCCGCTCGGCTTAAGGTATGA
Protein Sequence
MGDQQFFLKWNDFQTNMVTSFRHLRDEKSFTDVTLACEGQTCKAHKMVLSACSPYFKSLLEENPSKHPIIILKDVSYLHLQAILEFMYAGEVNVSQEQLPAFLKTAARLKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00249793;
90% Identity
iTF_01519421;
80% Identity
iTF_00022920; iTF_00249793; iTF_00321697; iTF_00784513; iTF_00834753; iTF_01124705; iTF_01152289; iTF_01507329; iTF_00035842; iTF_00425570; iTF_01021410; iTF_01192834; iTF_01416002; iTF_01436226; iTF_01502210; iTF_01506466; iTF_01546754; iTF_00409411; iTF_00428259; iTF_00809283; iTF_00933955; iTF_01080003; iTF_01317411; iTF_01532227; iTF_00122532; iTF_00274532; iTF_01130116; iTF_01133892; iTF_01134916; iTF_01316484; iTF_00013189; iTF_00180581; iTF_00301317; iTF_00341445; iTF_00888389; iTF_01217605; iTF_01337829; iTF_01425221; iTF_01494405; iTF_00115046; iTF_00120646; iTF_00354278; iTF_00406854; iTF_00666630; iTF_00761798; iTF_00781926; iTF_00811142; iTF_01027462; iTF_01084390; iTF_00008135; iTF_00043687; iTF_00121575; iTF_00779591; iTF_00795815; iTF_00802023; iTF_00833191; iTF_01041927; iTF_01281447; iTF_01335111; iTF_01361767; iTF_01490247; iTF_00040008; iTF_00075656; iTF_00123496; iTF_00407688; iTF_00660424; iTF_00711112; iTF_00776104; iTF_00823144; iTF_01017832; iTF_01029384; iTF_01202568; iTF_01285672; iTF_01439144; iTF_00027881; iTF_00156361; iTF_00430761; iTF_00450281; iTF_00685577; iTF_00973897; iTF_01061993; iTF_01183017; iTF_01302505; iTF_01339049; iTF_00164490; iTF_00300362; iTF_00648234; iTF_00790410; iTF_00449291; iTF_00683467; iTF_01020427; iTF_01031243; iTF_01203339; iTF_01377611; iTF_01437195; iTF_01538891; iTF_00205292; iTF_00353260; iTF_00383820; iTF_00447372; iTF_00681740; iTF_00712044; iTF_00724044; iTF_00736716; iTF_01076652; iTF_01205004; iTF_01440204; iTF_01526188; iTF_00282541; iTF_00441645; iTF_00621325; iTF_00657325; iTF_00667661; iTF_00787789; iTF_01064781; iTF_01081709; iTF_01125581; iTF_01197901; iTF_01205805; iTF_01260237; iTF_00445326; iTF_00462510; iTF_00820206; iTF_00909806; iTF_00952814; iTF_01220750; iTF_01251950; iTF_00017455; iTF_00146543; iTF_00457327; iTF_00622095; iTF_00726575; iTF_00836687; iTF_00887503; iTF_00177296; iTF_00208016; iTF_00677776; iTF_00778832; iTF_00791312; iTF_00850896; iTF_01083472; iTF_01135888; iTF_01204176; iTF_01444016; iTF_01508176; iTF_00114193; iTF_00124401; iTF_00302257; iTF_00758385; iTF_00782737; iTF_00810225; iTF_00906289; iTF_01028433; iTF_01082577; iTF_00037938; iTF_00155410; iTF_00412626; iTF_00723250; iTF_00970514; iTF_01115794; iTF_01151314; iTF_01562098; iTF_00034899; iTF_00036947; iTF_00774579; iTF_00869779; iTF_00907155; iTF_01073715; iTF_01544051; iTF_00021428; iTF_00038964; iTF_00235956; iTF_00247316; iTF_00323604; iTF_00656244; iTF_00695796; iTF_00806836; iTF_00889364; iTF_00954676; iTF_01071732; iTF_01503092; iTF_00355317; iTF_00408565; iTF_00780341; iTF_00828053; iTF_00934933; iTF_00958037; iTF_01248309; iTF_01534069; iTF_01569461; iTF_00041014; iTF_00185430; iTF_00186390; iTF_00284662; iTF_00357750; iTF_00358742; iTF_00752182; iTF_00776790; iTF_01016854; iTF_01030358; iTF_01178742; iTF_01222582; iTF_01334006; iTF_00119703; iTF_00148567; iTF_00237879; iTF_00256055; iTF_01090903; iTF_01166839; iTF_01280503; iTF_01495127; iTF_00042776; iTF_00171960; iTF_00195256; iTF_00257048; iTF_00279224; iTF_00281496; iTF_00356408; iTF_00680696; iTF_00786104; iTF_00831352; iTF_00928824; iTF_01079160; iTF_01094168; iTF_01495864; iTF_00112601; iTF_00248217; iTF_00325529; iTF_00819289; iTF_00835705; iTF_00859609; iTF_01181977; iTF_00000442; iTF_00707098; iTF_00745914; iTF_00896986; iTF_01018682; iTF_01153114; iTF_01246042; iTF_01544986; iTF_00012123; iTF_00041915; iTF_00410427; iTF_00658523; iTF_00663195; iTF_00775355; iTF_00953659; iTF_01063867; iTF_01401403; iTF_01416955; iTF_01543067; iTF_00150748; iTF_00411580; iTF_00843644; iTF_01080828; iTF_01368220; iTF_00026973; iTF_00364157; iTF_00429149; iTF_00878941; iTF_01312317; iTF_01363229; iTF_01430045; iTF_01438141; iTF_01545853; iTF_00074654; iTF_00178334; iTF_00236734; iTF_00794782; iTF_00871422; iTF_01193694; iTF_01230750; iTF_01527454; iTF_00071615; iTF_00273727; iTF_00290815; iTF_00403935; iTF_00448255; iTF_00781119; iTF_01093247; iTF_01503999; iTF_00007232; iTF_00382784; iTF_00673600; iTF_00785312; iTF_00824864; iTF_00851936; iTF_00924896; iTF_01095072; iTF_01358976; iTF_01441216; iTF_01492128; iTF_01561216; iTF_01219874; iTF_01429155; iTF_00638751; iTF_00432355; iTF_00948008; iTF_00433262; iTF_00433263; iTF_01221713; iTF_01332931; iTF_00149540; iTF_00772133; iTF_00822085; iTF_01535045; iTF_00642473; iTF_01085513; iTF_01360809; iTF_00072202; iTF_00375435; iTF_01026446; iTF_00365040; iTF_00951952; iTF_00986352; iTF_01173395; iTF_01340339; iTF_00208982; iTF_00744855; iTF_00772985; iTF_01564793; iTF_00651866; iTF_00288155; iTF_00858686; iTF_01062943; iTF_00467492; iTF_00468264; iTF_01010504; iTF_01141768; iTF_01147466; iTF_01148912; iTF_01206673; iTF_01141012; iTF_01180406; iTF_01143192; iTF_01144635; iTF_01149692; iTF_01179584; iTF_01140289; iTF_00923816; iTF_01176266; iTF_00023884; iTF_00299216; iTF_00345932; iTF_00799373; iTF_01086383; iTF_00342320; iTF_00458160; iTF_01012498; iTF_00682547; iTF_00276564; iTF_00897916; iTF_00675215; iTF_00783647;