Lsem012451.2
Basic Information
- Insect
- Lithophane semibrunnea
- Gene Symbol
- retn
- Assembly
- GCA_947363905.1
- Location
- OX376205.1:6357141-6362478[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-19 2.6e-16 60.2 0.0 17 89 2 72 1 72 0.95 2 2 4 9e+03 -2.4 0.0 25 38 200 213 162 218 0.60
Sequence Information
- Coding Sequence
- ATGGGCACTCCAATCAATCGGCTACCGATAATGGCGAAGTCCGTGCTAGACCTGTACGAGCTGTACAATCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCTTCGTCCATCACGTCTGCTGCCTTCACGTTACGTACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAAAACCTTTCAACCAGGAGCGAGTTGGATGCAGCCATTGAAGGGAACAAGCGTGAGGGACGTCGCGCCTCTGGACAGTATGACGCACAGGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTATCGCTGTCGCTGGGGGGTGTCGCGCCGCGTCTGCCACCGCTACCGCCGCACGCGCCGCATCTCGCTCAGCACGACATTGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCCAGCAATGGTCCAGCACCAATAATGTCACCCCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCTACAATAATAACAATAACAACAGCCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCAGCCGCCCCCCCAGCCGCCCCCCCTCGCCCGCGCACGCGCCGCACGACGCGCCGCACCGCCACAGCCGCAGGGACGTCACGTCGCCGCCGCAGATCAACGGCATGCCCAATTCCAACGGTGTCAATGGAGCTGCTTTCAAGATTACTACCAGAGGTGACGCGAGCACAGGTGACCAGCAATTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPASRPPSRPPSPAHAPHDAPHRHSRRDVTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -