Lorn011375.1
Basic Information
- Insect
- Lithophane ornitopus
- Gene Symbol
- retn
- Assembly
- GCA_948473465.1
- Location
- OX419630.1:5981017-5987797[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1e-19 2.3e-16 60.3 0.0 17 89 33 103 20 103 0.94 2 2 4 8.8e+03 -2.5 0.0 25 38 231 244 193 249 0.60
Sequence Information
- Coding Sequence
- ATGCCACTACAGCTTTATACTAATGATAATACCACTGCTCGTACAGCCGCTGCCCGCCAGGTTATGACTGCCAGCCCATCCAATAACAAAATACCAGGAACTCCAATCAATCGGCTACCGATAATGGCGAAGTCGGTGCTAGACCTGTACGAGCTGTACAACCTGGTGATAGCTCGCGGCGGGCTGGTGGAGGTCATCAATAAGAAGCTGTGGCAGGAGATCATCAAGGGACTGCGGCTGCCATCGTCCATCACGTCTGCTGCCTTCACGTTACGCACACAATACATGAAATACCTGTATGACTACGAGTGCGAGAAGAAGAACCTATCAACCAGGAGCGAGCTGGATGCAGCCATTGAAGGGAACAAGCGTGAGGGACGTCGCGCCTCTGGGCAGTATGACGCACAAGCTGCTTTAGCTATGCCCCCACTAAACCGCGTGCCCGCGTCTCTCGCGCAGCTGTCGCAGCACATGCAGCCACTGTCGCTGTCGCTGGGGGGTGTCGCGCCGCGTCTGCCACCGCTGCCGCCGCACGCACCGCATCTCGCACAGCACGACATTGAGTACAGGGTACGCGAGTATATGAAGATGATACAGCAGCAGAGGGAGCTTATGAGAAATGGCTCCGAATCGCCCCCCAGCAATGGTCCAGCACCAATAATGTCACCTCGTGACGCAGCCGCCCTCAGTGCCATCGACGTCTCCCGCCTCACTCTCTGGTCACTCTACAATAATAACAATAACAACAGCCCACAACCGGACCTTGAACCACAACGCGAGGCTCTGAACCTGAGCGAGAGCCCCAACTCGGTGACGAGCGGCGGCAAGCGCGAGGCGTGCCGCTCGCCCGCGCCGCCCGCCAAGCGCCGCACGCCGCGCCCCGCCAGCCGCCCCCCCAGCCGCCCCCCCTCGCCGCACGACGCGCCGCACCGCCACAGCCGCAGGGACGTCACGTCGCCGCCGCAGATCAACGGCATGCCCAATTCCAACGGTGTCAATGGAGCTGCTTTCAAGATTACTACCAGAGGTGACGCAAGCACAGGTGACCAACAACTGGTAGTGTCAATAGAGCTGAACGGAGTAACGTATGAAGGAGTACTCTTTCCCTCAGGCAACGGTCAAAATGGACACAGACAAATGGTGTCTTAA
- Protein Sequence
- MPLQLYTNDNTTARTAAARQVMTASPSNNKIPGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRVPASLAQLSQHMQPLSLSLGGVAPRLPPLPPHAPHLAQHDIEYRVREYMKMIQQQRELMRNGSESPPSNGPAPIMSPRDAAALSAIDVSRLTLWSLYNNNNNNSPQPDLEPQREALNLSESPNSVTSGGKREACRSPAPPAKRRTPRPASRPPSRPPSPHDAPHRHSRRDVTSPPQINGMPNSNGVNGAAFKITTRGDASTGDQQLVVSIELNGVTYEGVLFPSGNGQNGHRQMVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01029938;
- 90% Identity
- iTF_01025756;
- 80% Identity
- -