Llae013436.1
Basic Information
- Insect
- Lissagria laeviuscula
- Gene Symbol
- lrrfip2
- Assembly
- GCA_030264695.1
- Location
- JARJDU010032055.1:1378-3327[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-95 1.7e-90 303.6 25.9 20 300 1 270 1 270 0.92 2 2 0.0022 46 3.4 5.1 120 171 268 319 267 338 0.88
Sequence Information
- Coding Sequence
- ATGCGAGATTTGGAACGACAGCAACGCGAACAAGAGGAAAACGCTGATAGACAATTCGATATGTTGAGTGAACCCATGACAAGGAGACCTGCAACCACCAGCAGGTTTCTATCCAGTCGGCGGTCATCCGAGGACTCATTAGAAGATACTGGAAGTTTGCGGGATCTCAGGCATGAACTCAAAGAAGTTGAGGAGAAGTTTCGTAAGGCTATGATAGCCAATGCACAATTGGATAATGACAAAGCTGCACAGACTTATCAACTGGAACTCTTAAAAGATAGaTTAGAAGAATTGGAAGAAGACCATTCACAAGTAAAACGTGAGCATAAAGATAAATGCAGGGATTTTGAGCAATTGAAACGGCTGACGGCGCAATTAAAAGACGAATTGGCGTTGTTCAAAGCCGAATTGGATGAACGCGAACGACTTATTGCTGAGAAAGGTCTCGTCATTGTAGCAGCTGATGTAGATGAAACTGAAGGCATGACCAATGGTCCTAGAACATCGACAACTCCTTCGATACGTAGGGCATTAGTAAGCGCGCAAAATGCGCATTTGTTGGAGAACGCTGGTGAAGGTAGTCTGGACGTCCGGCTGGCACGTTTCGCAAAGGAACGTTCCGAATTTCTTGATCAGATTAGCCATTTGAAACTAGAGCTCGAAGAAGAACGAAGTAAACGACGAAAAAGTAGTGGGACCATGAATGGACCTGATTCGGATAGTGATGCTGCTGATATTcaaagaGAAGCAAGCAAACAATTGGCCGAATATAAATTTCGAGCGCAAAAAGCTGAGCAGGATGTGGCGACGCTGCAGGCAACTGTCGCCCGATTAGAAAGTCAAGTGATTAGGTATAAATCTTCTGCGGAAATATCTGAAAAGAGCGAGGAAGCGCTGAAAGCAGAGAAAAGAAAGTTGCAAAGAGaggCCCGGGAAGCTCAGAATAGAGCTGAAGAGCTTGAAGTATCCAACACACACCTTATCAAACGATTGGATAAGCTCAAAAATGCCAAGTCAGCTCTACTCAAAGAACTTTGA
- Protein Sequence
- MRDLERQQREQEENADRQFDMLSEPMTRRPATTSRFLSSRRSSEDSLEDTGSLRDLRHELKEVEEKFRKAMIANAQLDNDKAAQTYQLELLKDRLEELEEDHSQVKREHKDKCRDFEQLKRLTAQLKDELALFKAELDERERLIAEKGLVIVAADVDETEGMTNGPRTSTTPSIRRALVSAQNAHLLENAGEGSLDVRLARFAKERSEFLDQISHLKLELEEERSKRRKSSGTMNGPDSDSDAADIQREASKQLAEYKFRAQKAEQDVATLQATVARLESQVIRYKSSAEISEKSEEALKAEKRKLQREAREAQNRAEELEVSNTHLIKRLDKLKNAKSALLKEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01096637;
- 90% Identity
- -
- 80% Identity
- -