Ltes040272.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- nfxl1
- Assembly
- GCA_951800035.1
- Location
- OX637535.1:39385556-39388621[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 2 6.4e+04 -8.1 6.4 15 19 157 161 156 161 0.82 2 19 0.13 4.2e+03 -0.3 0.4 4 10 192 198 191 198 0.95 3 19 1.8e-08 0.00058 21.6 16.0 1 18 206 222 206 223 0.98 4 19 1.9 6e+04 -4.0 2.3 6 10 249 253 248 253 0.88 5 19 9.1e-05 2.9 9.8 12.9 3 19 261 278 259 278 0.91 6 19 2 6.4e+04 -4.8 1.1 6 10 303 307 303 307 0.81 7 19 9.9e-07 0.032 16.0 11.2 1 19 313 331 313 331 0.98 8 19 4.2e-08 0.0014 20.4 10.5 1 18 366 383 366 384 0.96 9 19 2 6.4e+04 -5.0 2.3 5 10 407 412 407 412 0.91 10 19 1.4e-06 0.045 15.6 16.7 1 18 418 435 418 436 0.98 11 19 1.6e-10 5.1e-06 28.2 14.5 1 19 445 463 445 463 0.98 12 19 0.095 3.1e+03 0.1 10.8 9 19 508 518 499 518 0.88 13 19 0.00044 14 7.6 5.7 1 11 530 539 530 540 0.95 14 19 0.33 1.1e+04 -1.6 0.9 6 10 599 603 598 603 0.90 15 19 3.5e-06 0.11 14.3 5.1 1 11 609 619 609 620 0.96 16 19 2 6.4e+04 -4.8 1.9 15 18 633 636 633 637 0.85 17 19 0.011 3.4e+02 3.2 14.6 3 18 649 664 648 665 0.91 18 19 2 6.4e+04 -5.5 2.1 9 13 671 675 670 675 0.72 19 19 3.2e-07 0.01 17.6 12.3 1 17 716 734 716 736 0.86
Sequence Information
- Coding Sequence
- ATGCCGTCAACCAAgagtaaccaaaaaaaatccACAAAAAATACGACTGAAAAGTTCAATGAGGCTCATGCAAGGAACATAGAAGTCGCTAGAAAACTTGTTGAAAATTATGTATCATCTTCTGAAGACGAAGAGGAATTAGAtgagaaaacaattttaaAATCATTATATCAGCATTACAATACACGTAAGGGGGATGAACATCTTTTGGCAAAGACTGCCggttttttagaaaatgttttacaaaCTGGAGCTGCTACGTGTCTTATTTGTATTGGAAGTATAAAGCGACCAAATGCAATATGGTCCTGcaaatattgttattgtttcttTCATTTGAACTGCATACGAAGATGGTCTAATGACAGTATGGCCCAGGCAAAATCCCAAACCCAAAATGAGCAGGGTTACTACAACAATATGGGAGAATATGTGCCACCTAAAAAAGCTAAATCCTTACATTGGTGTTGCCCGCAATGTCGAAAAGAATTCGGTCAGGACGAGAAGCCAAAGGAATATGAATGCTTTTGTGGTAAGGAAATTAATCCGCCATCGCAACCCTGGCTAGTGCCTCATTCGTGTGGGGAAATATGTGGCAAAGAACTAATGCCGAATTGTGGCCATAAATGTACATTGTTGTGTCATCCCGGCCCGTGCCCTCCTTGTGCTCAATACGCTATTACATCGTGCAAATGCGGAAAATCTCCAGCAAAATCTGTGCGCTGTGTTGAAAAGTTATGGGAGTGCCAGAAAAAATGTGACCTGTTACTAGCGTGTAAGGAACATATATGTAGAAAGCTATGTCACAAAGACGGGcaatgtccaccatgtcagcAAACAAGTATGCAACCTTGTGAATGCGGCAGAGAAAAAGCGAAACGCCTCTGTTGTGAGCTGAAGTGGCATTGTAAAAATCCGTGCGGGAAAGTATTACCTTGTAGCTTACATGTTTGTAGAAAGATTTGTCATTCAGGTAACTGCGGAGAATGTCCTTTAAGTTTGCCGCGATGCTGCCCATGTGGTAAAACTAAAAAAGTAGGCCCTTGCTCTGAGGTTATAGACACTTGTGGAGATACTTGCCAAAAAATGCTTGCTTGTGGTTTACACACTTGTTCTCAACGCTGCCATAAAGGGAGTTGTAATTTGTGTTTAAtcataacaaagaaaaaatgccGCTGTGGCATGCGCGAAAAAGAATTGCCGTGTTCCAAAGAGTTTACTTGCGAGaccaaatgtaaacaaattcgaGACTGTGGCAAGCATCCCTGTAATCGCAagtGCTGCGATGGAAATTGTCCATCATGTGACAAAGTGTGCGGCAAACCTTTGTCATGCGGTAAACACAAATGTCAATCGATTTGTCACAAGGGCCCCTGCTATCCTTGTCAACAAAAATCCCAAATCAATTGTCGCTGTGGTAAATCTAAGAAGAGTGTGCCGTGCGGTCGAGAGCGAACAGCACGAGTGGTTTGTTTGGAACCATGTCGaatcCCTTCAAAATGTCATCATGAGAATAAACATCGCTGTCATAAAAATGAATGTCCTCCATGTTCCTTACCATGCGGTTTGCAGAATGATACAACTAAGTGCGGGCACAAGTGTATGGCAAAATGTCATGCATCGGTTAAGGTAACTAAAAAACCTAATTCTGATACAACGAGTATATGGGAACCTACCAAACAGTTTGAACTAAAACAAATGCCTCATCCGCGCTGTGAACAGAAAGTAAGCGTTACATGTGTTGGTGGGCATGAAACTGCCGATTGGCCCTGTTGGAATTCGAAGCCTTCATCCTGCCAACGGTTATGTAATCGAACTCTACATTGTGGTAATCACAAGTGTTCTTTAGTCTGTCACGCAGTGGAGAATTTAAATGACATGAAGcaACAAAGTGGTTGTTCACCTTGTAACGAAGGTTGCAATATTCCTAGACCTCAGGGATGTACTCATAACTGTCCTAGACCCTGCCATTTACCACCATGTAATAGTTGCAATTTCGCTATCAAAACTAAATGCCATTGTGGATTAATGCCCATTGTTTACAAATGTAGCGAATATTTTAACACAACAGCTGATGAAGGTGACATTTTGGAAAAACAAGAGAACTTGAAAAGTTGCGGAAATAGAtgtttaaaaaatTATCCTTGCGGTCATCGCTGCACAGCCAAATGTCATTCAGGCCCTTGTCCCTATCCCGAAGCATGTCGCAAAAAACTTCGCATCTACTGTGATTGCAAACGTTTAAAATCCGATGTTTCTTGCGATAAACATCGCGCTGGTCTTGAAAAGTTACACTGCGatgaaaattgtgttataaCGAAACAAATACTAGAACAAACACGCCTAAAGGAAGAGgaattaataaagaaacaagAGGAAGAGCGCAATCGTCTAGAGGTGGAACagtttgaaaagaaatttagtaAGCGTAAACCCAAGGAACGCAAAACATTAGAAGCGAAGCAAAAGAATCCCCTTAACTGGAATCTAATCGGTGTTTATGCTGGTATTATAGCAGCTGTATTGTTAGCAGTCGCTTTAGCTTTCTACGAAGATCGTTAA
- Protein Sequence
- MPSTKSNQKKSTKNTTEKFNEAHARNIEVARKLVENYVSSSEDEEELDEKTILKSLYQHYNTRKGDEHLLAKTAGFLENVLQTGAATCLICIGSIKRPNAIWSCKYCYCFFHLNCIRRWSNDSMAQAKSQTQNEQGYYNNMGEYVPPKKAKSLHWCCPQCRKEFGQDEKPKEYECFCGKEINPPSQPWLVPHSCGEICGKELMPNCGHKCTLLCHPGPCPPCAQYAITSCKCGKSPAKSVRCVEKLWECQKKCDLLLACKEHICRKLCHKDGQCPPCQQTSMQPCECGREKAKRLCCELKWHCKNPCGKVLPCSLHVCRKICHSGNCGECPLSLPRCCPCGKTKKVGPCSEVIDTCGDTCQKMLACGLHTCSQRCHKGSCNLCLIITKKKCRCGMREKELPCSKEFTCETKCKQIRDCGKHPCNRKCCDGNCPSCDKVCGKPLSCGKHKCQSICHKGPCYPCQQKSQINCRCGKSKKSVPCGRERTARVVCLEPCRIPSKCHHENKHRCHKNECPPCSLPCGLQNDTTKCGHKCMAKCHASVKVTKKPNSDTTSIWEPTKQFELKQMPHPRCEQKVSVTCVGGHETADWPCWNSKPSSCQRLCNRTLHCGNHKCSLVCHAVENLNDMKQQSGCSPCNEGCNIPRPQGCTHNCPRPCHLPPCNSCNFAIKTKCHCGLMPIVYKCSEYFNTTADEGDILEKQENLKSCGNRCLKNYPCGHRCTAKCHSGPCPYPEACRKKLRIYCDCKRLKSDVSCDKHRAGLEKLHCDENCVITKQILEQTRLKEEELIKKQEEERNRLEVEQFEKKFSKRKPKERKTLEAKQKNPLNWNLIGVYAGIIAAVLLAVALAFYEDR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01313435;
- 90% Identity
- iTF_00901161;
- 80% Identity
- -