Ltes046475.1
Basic Information
- Insect
- Linnaemya tessellans
- Gene Symbol
- lrrfip2
- Assembly
- GCA_951800035.1
- Location
- OX637536.1:9573648-9581918[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1 6.4e+04 -12.7 20.7 25 171 22 166 16 172 0.44 2 4 0.56 3.6e+04 -4.5 12.0 21 97 162 238 161 282 0.57 3 4 8.7e-117 5.6e-112 375.7 25.9 1 299 342 638 342 639 0.94 4 4 0.07 4.5e+03 -1.6 3.7 220 245 667 692 642 713 0.47
Sequence Information
- Coding Sequence
- ATGTCAGTGGAACAAAAATTAACTGATAAAAATGTTGTggctgcagcaacaacaaaatctaaTAAGAAGAACaaacacaacaacagcaacggcagtaagaaattcattaaaaaatcattgaagatatcaaaaaataataaaaaacatgcgaACATTACTAATGTCAACAACAAAAGTGTGaataacaatagcaacaacaacagcaacagtagTAGTattagcagcagcaacaacaacaatattgaaGAGGCAAACGATGAAATCATCGAGGAGTTGTTTGATTTTAGCGATACCGATTTAAAAGAACTCGACGTTATAAATGACGAACAAGAAATtaacaatagcaacaaaaccTCGACAACCAATAGTTCCGAGCTTTTAACTGAAAGCAACCGCAAACTAATGGAAAACGTGAAGGAAGTTGATAAAGATTCCGAACTGCaattgcaaaatgttgcaaGTGATAATATCAATGATTTCAACAATGAACTAGAACAACAACAGGCAGAACTACAATTATTATCATCGCCAGTAGATGATAACATTGATAAACAAAACGAAGAAGACCTTCCAAAACAGTGCGAATCTGTAACGACAATATCACCAACAACAAGTGAAATTATTAGCTCTGAAGAAAATATAGACAAAGAAAGTAGAATTAAAAGTCAGTCAGAAATAGAAACAGCCAAGTCTGAGGAGAGCGAAGTAAACGAAATTAACAAAGAATCTGGTAATACAACCGTACAAATCTCCAATGGTTCTATTGTTACCGAACGTTCTTCTACCTCTGAAACTGACAACAACGACAATGAAATGTCAACATCTTCAGACATAAATtctgtgaaaataaataatatcgcGGAGTCGTCGCCGTTGATTGGAATTAAAGAAGGCAGTTACTGCGACCAAAATGATAACAATGATGCTTATAACACTAATGAAGATgataatgataatgatgatgaataCACTGAACCATATGATGAACTTTTAGTGCAGTTTCTTGATGAATCCAATCAGATTGCTGAGGCAAGATTAGCTGCCAGAAGGCATGCCAGAGCGGAAGCTCGGGAAATACGCATGCGTGAATTAGAACGTCAACAAAAGGAACAAGAATCTAATGCAGATCGTGTTTTCGATATGCATTCAACGGTAACTGGAATTACGCCACTGTCACACATGCGTCTTGGCTTGGGAAGTTCGCCAGTAACAGGTTTACTAAATTCAACAAGAGGCAACTCTATGTCTTCGCGACGCAGCAGTGAAGATTCGCTAGAAGAGGAAGGCCGCAGCTTAAGGGATATACGTCATGagttaaaaGATGTCGAAGAACGGTTTCGCAAGGCTATGATAGCGAATGCTCAGTTGGATAATGATCGTGCCTCACAAACGTATCAAATACAGTTGTTGAAAGACAAGCTGGAAGATATGGAAGAATCATATTCACAATTACAGCGGGAATGTAAAGAAAAGACACGCGATTGTAATGCCTTAAAACGATCGTTGGATAAATTAAGCGAAGAGCTTAAACTGGTACAGGGTCAGCTTAATGAGCGTGACACACTGATAGCGGAACAGGGTTTAGTTATTGTGGCAATTGAAAATGAGGATGGCACTGATGCCAAACGTGCTCTAGTCAGTGTTGAAAATGCACAATTATTGGGTTCGGTACAAGGATCATTAGATGTACGACTTAAGAAATTCAGCGAAGAGAAACAGCAGCTGCAGGCGGAAGTTCAACAATTGCAGGAACAATTAGATTCATATAAAAGTCAGGGCAAAGGTCGAGGTAAAGGTACTTCGTCTAATGGTCCCATTGGTTCAGATGATGATGATTACGAAGCTCAAAGAGAAGCTAACAAAATCATAATGGACTATAAATATAAGTTACAAAAAGCTGAGCAGGAAATTGCTAGTCTTCAATCAAGCTTAGCACGTTCTGAGACACAAGTTATACGCTATAAAAGTACAGCCGAAGCTGCCGAAAAAGCTGAAGCCGAACTTAAAATCGAACGAAGAAAATTGCAAAGAGAGAATCGAGAAGCAATGGAAAAGCTTGAAGAGTTAGAAACATCAAATAATCATCTTCTTAAACGCCTGGATAAACTAAAGAATGCGAAAAGTGCTTTGCTAAAGGATCTTTGA
- Protein Sequence
- MSVEQKLTDKNVVAAATTKSNKKNKHNNSNGSKKFIKKSLKISKNNKKHANITNVNNKSVNNNSNNNSNSSSISSSNNNNIEEANDEIIEELFDFSDTDLKELDVINDEQEINNSNKTSTTNSSELLTESNRKLMENVKEVDKDSELQLQNVASDNINDFNNELEQQQAELQLLSSPVDDNIDKQNEEDLPKQCESVTTISPTTSEIISSEENIDKESRIKSQSEIETAKSEESEVNEINKESGNTTVQISNGSIVTERSSTSETDNNDNEMSTSSDINSVKINNIAESSPLIGIKEGSYCDQNDNNDAYNTNEDDNDNDDEYTEPYDELLVQFLDESNQIAEARLAARRHARAEAREIRMRELERQQKEQESNADRVFDMHSTVTGITPLSHMRLGLGSSPVTGLLNSTRGNSMSSRRSSEDSLEEEGRSLRDIRHELKDVEERFRKAMIANAQLDNDRASQTYQIQLLKDKLEDMEESYSQLQRECKEKTRDCNALKRSLDKLSEELKLVQGQLNERDTLIAEQGLVIVAIENEDGTDAKRALVSVENAQLLGSVQGSLDVRLKKFSEEKQQLQAEVQQLQEQLDSYKSQGKGRGKGTSSNGPIGSDDDDYEAQREANKIIMDYKYKLQKAEQEIASLQSSLARSETQVIRYKSTAEAAEKAEAELKIERRKLQRENREAMEKLEELETSNNHLLKRLDKLKNAKSALLKDL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00900580;
- 90% Identity
- -
- 80% Identity
- -