Ladu000210.1
Basic Information
- Insect
- Ligdia adustata
- Gene Symbol
- DMRT2
- Assembly
- GCA_947049285.1
- Location
- CAMRIN010000007.1:239660-246995[-]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-26 1.8e-22 79.3 11.4 1 47 14 60 14 60 0.99 2 2 0.41 2.4e+03 -1.1 0.1 34 44 124 134 122 137 0.77
Sequence Information
- Coding Sequence
- ATGCCGAGTGAGGGTAGTGAGGAAGGGCGGAAGGCGCTACGAACGCCGAAGTGCGCCCGCTGCAGGAACCACGGTGTGATATCCTGCCTGAAAGGACACAAGCGGCTGTGCCGGTGGCGAGACTGCCGCTGTCCAGGCTGCCTGCTGGTGCTGGAGCGGCAACGAGTGATGGCAGCGCAGGTAGCGCTCCGCAGACAGCAGGGCGCGGGTGGGGCGGAGGCCCGAGACAGCGAGGCGGCTGCGCTGGCGGCCCGCAAGCGCGCCTACCGCGCACGTTTACGGTGTATGCAGATGACTAGGGCATATCCGGTACCACCGCAACATGTTTACGCAGGTGACGAGCGCATTTTCGCCGGCGACCGAGCGTGGTGCGAGCGCGTTCGCCGACGTCGCGCGTTCGCAGACGCCGAGCTCGAGCGCACGTACGCCCCCGTCCCCCCGCCCGCGCCGCCAGCACCACCCGCAGCTCTTCTCTGCAGAAACCTGCTCGCAGCACTCCTCACCACATACGCACCGCTCCCGGCTCAGCCGCAAAGACAGAAACTCTCATTCTCGATCGAATCTATCATTGGCGTTCAGTAG
- Protein Sequence
- MPSEGSEEGRKALRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGGAEARDSEAAALAARKRAYRARLRCMQMTRAYPVPPQHVYAGDERIFAGDRAWCERVRRRRAFADAELERTYAPVPPPAPPAPPAALLCRNLLAALLTTYAPLPAQPQRQKLSFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818386;
- 90% Identity
- iTF_00827014;
- 80% Identity
- -