Hfas013920.1
Basic Information
- Insect
- Hylaea fasciaria
- Gene Symbol
- DMRT2
- Assembly
- GCA_905147375.1
- Location
- LR990193.1:10171877-10176216[+]
Transcription Factor Domain
- TF Family
- DM
- Domain
- DM domain
- PFAM
- PF00751
- TF Group
- Zinc-Coordinating Group
- Description
- The DM domain is named after dsx and mab-3 [2]. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4 [1]. The dsx DM domain has been shown to dimerise and bind palindromic DNA [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-26 1.6e-22 79.3 11.4 1 47 15 61 15 61 0.99 2 2 0.43 2.1e+03 -1.2 0.1 34 44 124 134 122 137 0.77
Sequence Information
- Coding Sequence
- ATGCAAGGCGAGGGTCGCGAGGAAGGCGGACGCAAGGCGCTGCGGACGCCGAAGTGCGCGCGGTGCCGCAACCACGGCGTCATCTCCTGTCTGAAGGGGCACAAGCGGCTGTGCCGGTGGCGCGACTGCCGCTGCCCAGGCTGTCTGCTGGTGCTTGAACGACAACGGGTCATGGCTGCGCAGGTAGCGCTCCGCAGACAGCAAGGCGCTGGAGGGGCGGAGGCCCGAGACGGCGAGGCGGCCGCGCTGGCGGCTCGCAAGCGCGCCTACCGTGCGCGCCTGCGATGTATGCAGATGACCAGAACTTATCCGGTTCATCCAAATATTTACGCAGGTAACGAGCGCCTGTTCGCCGAGGACCCGGCGTGGTGCGAGCGCGTGCGGCGCCGGCGAGCGTTCGCGGACGCAGAGCTCGAGCGCACGTTCGCGCGCGCCCCGCCCCCCGCCGCCCCCGTGCCCCCACCCCCGCCCCCGCCCCCCGCGGCTCTGCTGTGCAGGAACCTGCTGGCGGCGCTGCTGACCACATACGCGCCGATGCCGCCTCAGCCGCAGCGGCAGAAACTCTCCTTTTCGATAGAATCTATCATTGGCGTTCAGTAA
- Protein Sequence
- MQGEGREEGGRKALRTPKCARCRNHGVISCLKGHKRLCRWRDCRCPGCLLVLERQRVMAAQVALRRQQGAGGAEARDGEAAALAARKRAYRARLRCMQMTRTYPVHPNIYAGNERLFAEDPAWCERVRRRRAFADAELERTFARAPPPAAPVPPPPPPPPAALLCRNLLAALLTTYAPMPPQPQRQKLSFSIESIIGVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00250503; iTF_00032956; iTF_00666577; iTF_00724002; iTF_00468216; iTF_00429060; iTF_01010402; iTF_01358914; iTF_00428169; iTF_00819213; iTF_00820125; iTF_00341362; iTF_00821878; iTF_00063640; iTF_01441144; iTF_00177177; iTF_00859516; iTF_01429984; iTF_00290757; iTF_00787698; iTF_00827014; iTF_00825785; iTF_01208234; iTF_01209317; iTF_00895985; iTF_01170646; iTF_00663122; iTF_01171514; iTF_00055467; iTF_01172425; iTF_00649139; iTF_00390417; iTF_00407633; iTF_00406798; iTF_01443892; iTF_00836604;
- 90% Identity
- iTF_00055467;
- 80% Identity
- -