Llat034494.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leucozona laternaria
Gene Symbol
PAXBP1
Assembly
GCA_932273905.1
Location
CAKNZR010001018.1:83188-85902[-]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.9e-30 7.5e-26 92.7 0.2 4 272 621 828 619 830 0.94

Sequence Information

Coding Sequence
ATGTCTCTTTTCCGAAAACCTAAAAAAATAATTCAACGTCGGGTATTTACAACATTTGATGATGAAGATGGTGATCATTTTACAAAAAGTGACACTGGAAATTCAAAGAAAATCGATGTGGATGAGCAACACAATTTTAATTATAAAAAAAGAGTTAAATGCTATGAGAAAAAACTGGAGAATGAAAAAAATGATCTAACAGACTACAAAATATCTAAAACAAAATCATTGCTAAGTTTTGCAGATGACGATGAAGGAGATGAGGTATTTCAAGTTCGAAAATCGTCCCATAGTAAAAAAGTAATGCGTATGATGGACAAAGAACGGCGTAAAAAAAAAGCAAAAGAAGGAAGAGACTACGACTACGATTCCGTAAACTATTCATCACAGCAACAAGATGAAAAAGGCATGGGAGCAGCATATTCAACTGAAGCTCAAACTGCTAGCTCTAAAAGTAAAGGTGATGAAAAATGTCTATTGACTTCGTCGTCCGTTTCATCAGAACAAAGTAAAAGTAAAAAATCTGATGACATTGAAACAGAAATTCGCACAGACGACTTTGTGCTTGTCGTTAAAAAGTCAGATCCCGCACTCATTCTGAATGGGAGGGAAGCATTTTGCGCTGGAAAAGATGACATGTCTGATGAAGATGATGAAGGTGTTAGTGTCGATGATGCTTTTAGCCAACACATGTTTGCGAAACCAGAAAATCTTACACAAATGCTTGAAAGTGGTTCAATTCCAGATGCTGCAATGATTCATGCAGCAAGAAAACGCAGACAAAAAGTCCGTGAACAAGGTGCTGTTATTCCAGTGGAAGAACCTAAAAATGTATCAAATAAAATAGGAAAGCGAATCAATCGAGAAGAAGAAGTGGAAAATTCTGATGATGAAGATCGTGTTGATATGAATGCACTTACTGGGAAAAAAGAGCTCGAAGAACGCCGTGAACAATTTTATTCTGTTGAGAATGATTATTCCGATGATGATTCGGATCGTGAAACCAATGAATGGGAAAACCAACAAATTCGAAAAGGTGTAACTGGAGCACAGCTCTTGACAGCACAACAAGAGTCAGTCTTATCACGATTTATTATAAAGTCCTCAAAAAATAAGATAGAGTCTCCGCCACCTCTGTCCACCTCTACGCTTTTAGATGTGGCCTACGCAAGGAATTCATTTGAGAAACCACAGCAGGTAATAAGCTCTAATAGTAAAAGAGAAAACAAAAAATCGGCACTAAGAACACCTCAAGAAATAACAGATTCCATAAAAACAAGATTAATAAAACTAAAGGAACTTAATGTAAAACATAAATCAGATATTGAAAGAATATCAAGGGAGATGAAGGTTCTAAAACTGGAAGAAATAGACTGTTCACAAAAAGCACCAACTGCCGCAGCGAAATATCGATTCTATCAGGAAATAAATGGATACGTCAGCAACCTCATTGAGTGTTTCAATGAGAAGGCACCCAAAATAAAGGAGCTAGAGAAACATGCTATCCAAATTTTATCAAAACATCCTATTTTCTTGATTGAGAGGCGGAGACAAGACGTTCGCGACCAAGTAAAGGAAATGACAGAATCGACCAGCAAATGTTTGGGTTCAGCTCTAAGGAGGGGTCCGGATTATGAAGAAATAATCAAAAGAACAGCCGAACGGGAATGCAGAAGAACTCGAAGGCGCTGCGAGAGAGAGAAAAGCGACACCAGTAGTACACATTTAGATGGAATGTCAAGTGATGATGAAGTGTCTGATCATGTCCTTGAACAAAAAAAATTGTCAATAGACCAATTGGAGGTGGAAGTAGATGATTTGTTCGCAGATGCTGGAGATGATTTCTACAAACCAGAATTTATACTCTCAAAATTTAATGTTTGGCGAAAGACAGATATGGAATCATATAAAGATGCTTTTGTTAGTCTTTGTCTACCCAAGATCATGGGCCCCATCGTAAGAACTGAAACAATTATTTGGAATCCTTTAAACGAAAACTACAAAGACATTGAAAATATGAACTGGTATTCTGCTTGTATGCTTTATGGATGGTCGGAAAAAGAAACAGAAGATTCTTTGTTAGTTGATCCAGATATGAAACTAGTGCCAACAATAATTGAGAAAATATTACTTCCAAAAGTAACAGAAATTGTAAGTTACTGCTGGGATCCGATGTCAACAACGCAAAATCTACGATTGATTGGATTTATTAATCGGATTGGGAGAGACTACCCAATTCGACAATACTCAAATCAATTGCAGCAACTTTTCAATGCCATTCTAAATAAATTAAAATCAGCTCTTGATAGTGATGTTTTCATACCAATATTTCCAAAACAAGTCCAAGAAGCACGGACATCATTTTTCCAGAGACAACTTTGCAGTGGTTTAAAATTATTCAGAAATTTCCTTAGCTGGCAAGGAATTATAGCTGACAACGCATTAAGGGACCTAGCTATATCTTCTCTTTTGAATAGATATCTTTTATTAGCTACAAGGATGTGTTCCACCAAGGATGCACTTATCAAAGCTTATATTGTGGTGAATACTCTTCCAACGGCTTGGTTACAACCAGAATCCGAAACAATCCAGAACCTGCAACCTCTCATAACATTTATAAAGTCAATATTTGAAAGTTTCGATCCTAAAAACCCATTACATATGCAATCGTGTGATAAAGCAAAGAAAATCCTTCAACGCCTGCATAGTTGGTAA
Protein Sequence
MSLFRKPKKIIQRRVFTTFDDEDGDHFTKSDTGNSKKIDVDEQHNFNYKKRVKCYEKKLENEKNDLTDYKISKTKSLLSFADDDEGDEVFQVRKSSHSKKVMRMMDKERRKKKAKEGRDYDYDSVNYSSQQQDEKGMGAAYSTEAQTASSKSKGDEKCLLTSSSVSSEQSKSKKSDDIETEIRTDDFVLVVKKSDPALILNGREAFCAGKDDMSDEDDEGVSVDDAFSQHMFAKPENLTQMLESGSIPDAAMIHAARKRRQKVREQGAVIPVEEPKNVSNKIGKRINREEEVENSDDEDRVDMNALTGKKELEERREQFYSVENDYSDDDSDRETNEWENQQIRKGVTGAQLLTAQQESVLSRFIIKSSKNKIESPPPLSTSTLLDVAYARNSFEKPQQVISSNSKRENKKSALRTPQEITDSIKTRLIKLKELNVKHKSDIERISREMKVLKLEEIDCSQKAPTAAAKYRFYQEINGYVSNLIECFNEKAPKIKELEKHAIQILSKHPIFLIERRRQDVRDQVKEMTESTSKCLGSALRRGPDYEEIIKRTAERECRRTRRRCEREKSDTSSTHLDGMSSDDEVSDHVLEQKKLSIDQLEVEVDDLFADAGDDFYKPEFILSKFNVWRKTDMESYKDAFVSLCLPKIMGPIVRTETIIWNPLNENYKDIENMNWYSACMLYGWSEKETEDSLLVDPDMKLVPTIIEKILLPKVTEIVSYCWDPMSTTQNLRLIGFINRIGRDYPIRQYSNQLQQLFNAILNKLKSALDSDVFIPIFPKQVQEARTSFFQRQLCSGLKLFRNFLSWQGIIADNALRDLAISSLLNRYLLLATRMCSTKDALIKAYIVVNTLPTAWLQPESETIQNLQPLITFIKSIFESFDPKNPLHMQSCDKAKKILQRLHSW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00665632;
90% Identity
iTF_00664071;
80% Identity
-