Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_035044805.1
Location
JAWNNP010002948.1:8674-10519[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4 4.5e+03 -1.8 0.0 4 17 22 34 21 60 0.70
2 3 1.9e-07 0.00021 21.6 0.0 4 38 303 340 300 341 0.89
3 3 2.9e-09 3.2e-06 27.4 0.5 3 43 392 437 390 439 0.92

Sequence Information

Coding Sequence
ATGTGGATCTCGTGGAAACCTGTGTGGATAATCGTAACGACCCTGGTGCTCAGCGCACATAGTTGGGGCTCTGAAGAAATGGAAATTTTCGACTTGGTCGAGGAgatcaacaaaaacttttacgaATTCATGAGCATCAACCAGaatgcaacaaataacgaaataaaacgCGCCTTCCGTACGCTTTCAATAGTGTTGCATCCGGACAAAAACTCAGCCGAGGATGCTAACATACAGTTTCGAAATCTAGTCTCCATCTACGAAGTATTAAAAGACTCAAACAAGCGCGAAAAATATGATCGTGTGCTGAAGGAAGGGCTACCTAACTGGAAGTCTGCACTATACTATTATCGACGTATGCGCAAAATTGGCCTTTACGAAGGAGCATTCATACTCTTCATAATCGCAACGATTGGTCAATATCTTTTCGCCTGGGCTGCTTATCTTGAAAAGAAATATACCGCTGAACAAGTGTTCGGTACGAAGCTAAAGAAGCtgcagaagaaaaataaaaacatcgaTATGGAGGCAATACTCAGGGAAATACCAATACCATCGATTCTTAACACTTTACCCTTCCAAATACCATTGGCTATTTGGAATTTACCTAAAACCATAAAAGATGCATTTACTAAAGCCAGTGAATTAAAAGATTTGGCGTTAGAAAAACGAAGACAGGAGCTAGAGGCAGCCAAACGCCAGGAAGAGTTAGAAAGGGATGCAGAGGAGCAAACTCGTTTGCGTAAAGAACACAAAGAGAATTTGCGTAAACGGAAACAAAACACAAAGGCTCCGGAAAAAACTGAGGAAGAGCTCCGTGGTTATGCTCAGATTCAGGCGCGAGAGTTGACAGATAATGATGCAGTTAAGCCAGTAGCACAGAAATCAACAGTTAGCGGTGGTTTTTGGACAGACGAAGACCTCGTTGAACTGATAcgtttagtaaaaaaatatcCCGGTGGTTCGAGTAGTCGTTGGAATACCATTGCAGAGACCATGAATCGTACCGTACAAGAGGTTACCTTTATGGCtgcaaaaatgaaagaaaacggCTATAGAATACCCGGCCAAAGTGAAAGTGTCGCAGAAAACATTGTGCAGGTCACTCAAGAAACCGTGcgaaaagataaaacaaaaatatctgcCGAGAAGAGCATGCTCATACCGGAAACCAATTGGACGCAAGAGCAACAACGTGCCCTCGAAGCTGCCATTGTAAAGTACCGTAAGAACTCTAGCAGCGATCGTTGGCAAAAGATTGCAAACTGCGTGCCAGAGAAGACAAAAGAAGAATGTTTAATacggtataaatatttatgcgaaCTAGTGAAGTCACAAAAAAAAGCCGAAGAAGAGGCACCGGGCGAAGACAAAAGAAGGAAAACTGAAAAGTCATTAACCGATGATACTGTAGCCAATATAGACGACTTGACAAATACGAATAATGAACATGAAACGGAACAGCTGCAAGGTAGTAAAAAGCTTAGTAAACGTGAACGAAGGCGTCGTAAGCAAGATTTTTCAAGTGGGGAGGATTCAGATGACGCATACCAATATGAAATGAGTTAA
Protein Sequence
MWISWKPVWIIVTTLVLSAHSWGSEEMEIFDLVEEINKNFYEFMSINQNATNNEIKRAFRTLSIVLHPDKNSAEDANIQFRNLVSIYEVLKDSNKREKYDRVLKEGLPNWKSALYYYRRMRKIGLYEGAFILFIIATIGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMEAILREIPIPSILNTLPFQIPLAIWNLPKTIKDAFTKASELKDLALEKRRQELEAAKRQEELERDAEEQTRLRKEHKENLRKRKQNTKAPEKTEEELRGYAQIQARELTDNDAVKPVAQKSTVSGGFWTDEDLVELIRLVKKYPGGSSSRWNTIAETMNRTVQEVTFMAAKMKENGYRIPGQSESVAENIVQVTQETVRKDKTKISAEKSMLIPETNWTQEQQRALEAAIVKYRKNSSSDRWQKIANCVPEKTKEECLIRYKYLCELVKSQKKAEEEAPGEDKRRKTEKSLTDDTVANIDDLTNTNNEHETEQLQGSKKLSKRERRRRKQDFSSGEDSDDAYQYEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
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