Pvar011068.1
Basic Information
- Insect
- Phortica variegata
- Gene Symbol
- DNAJC1
- Assembly
- GCA_001014415.1
- Location
- JXPM01015703.1:939-3903[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2 2.5e+03 -1.3 0.1 2 12 20 30 19 40 0.75 2 3 1.1e-06 0.0014 18.7 0.0 4 38 303 340 300 341 0.89 3 3 2.1e-09 2.7e-06 27.4 0.5 3 43 392 437 390 439 0.91
Sequence Information
- Coding Sequence
- ATGAAGTATTGTGTGCAGATAGTAGTTCTTGTTTTGGGCACTTTGATAGTAGCCACAAATGCATGGGGATCTGAGGAAATGGAGATTTTCGATTTAGTCgaagaaattaacaaaaacttttacgaATTTATGGGCATCGGGCAAAATGCTACCAACAGCGAAATTAAACGAGCGTTTCGCACACTATCAATTGTCGTGCACCCAGATAAGAATCCAGCCGAAGATGCTAATATACAATTTCGAAATTTAGTCTCGATTTACGAAGTCCTCAAGGATCCAAGCCGGCGTGAAAAATACGATCGAGTACTCAAGGATGGCTTGCCAAATTGGAAGTCAGCACTCTATTATTATCGCCGTATGCGAAAAATTGGTTTATATGAGGGCGCTTTTATACTGTTCTTAATAATAACTGTGGGTCAGTATTTATTCGCGTGGGCGGCTTATCTGGAAAAAAAGTACACTGCTGAGCAGGTGTTTGGAACAAAGCTTAAGAagttgcaaaagaaaaataagaatatcGATATGGATGCAATACTTAAAGAAATACCAATACCATCAGTATTTAATACATTACCATTCCAAATACCAATGGCCATATGGAACTTGCCAACCACGATTAAGGATGCTCTTGGGAAAGCTAACGAACTGAAGGAACTAGCATTAGAGAAACGCAGACAAGAGCTTGAAGCTGCTAAACGTCAAGAGGAGCTGGAAAAAGAATATGAAGAACAGGCACGTCTACGCAAAGAGCACAAAGAGAATGTGCGTAAACGCAAGCAGAACAGTAAAGCACCTGAGAAAACAGAAGAGGAATTGCGTGGTTATTCGCAAATACAAGCCCGAGAACTTAATGACGAAGATGCTGTAAAGCCAGTTTCACACAAAGCAACCGTCAGCGGAGGTTTTTGGACCGATGAAGATCTCGTTGAACTTATACGCTTAGTGAAGAAATACCCTGGAGGGTCTAGTAGTCGTTGGAACATGATCGCTGAAACCATGAATCGCACCGTACAAGAGGTCACTTTTATGgcagcaaaagtaaaagagaATGGTTACCGCATACCCGGACAAACGGACAGCGTTGCCGAAAGCATTGTACAAGAATCGCAAGAGACTGGGcgcaaagaaaaagtaaaaaagaaagccGAGAAAAGCATGCTTATACCAGAGACAAACTGGACACAAGAGCAGCAACGGGCACTTGAAGCAGCTATTGTTAAGTACCGCAAGAATGCAAGCGGTGATCGTTGGCAAAAGATTGCTAATTGTGTGCCagagaaaacaaaagaggAATGTCTTATACGTTACAAGTATCTATGCGAGTTGGTTAAATCCCAAAAGAAGGCCGATGAGGATGCGCAAGAAAAAGATGATTTAAATGACGCACAAAAAAGTGATATTGATGCCGAAACTATCCCTCCACTCGGAAATGAAACagatattaaaacaaatgatgACGAAGAAAAGGATAAACCTACCGGCAAAAAACTCAGTAAACGTGAAcgacgacggcggcggcgggaCTTCTCGAGCGGGGAAGATTCTGATGACGCATATCAGTATGAAATGAGTTAA
- Protein Sequence
- MKYCVQIVVLVLGTLIVATNAWGSEEMEIFDLVEEINKNFYEFMGIGQNATNSEIKRAFRTLSIVVHPDKNPAEDANIQFRNLVSIYEVLKDPSRREKYDRVLKDGLPNWKSALYYYRRMRKIGLYEGAFILFLIITVGQYLFAWAAYLEKKYTAEQVFGTKLKKLQKKNKNIDMDAILKEIPIPSVFNTLPFQIPMAIWNLPTTIKDALGKANELKELALEKRRQELEAAKRQEELEKEYEEQARLRKEHKENVRKRKQNSKAPEKTEEELRGYSQIQARELNDEDAVKPVSHKATVSGGFWTDEDLVELIRLVKKYPGGSSSRWNMIAETMNRTVQEVTFMAAKVKENGYRIPGQTDSVAESIVQESQETGRKEKVKKKAEKSMLIPETNWTQEQQRALEAAIVKYRKNASGDRWQKIANCVPEKTKEECLIRYKYLCELVKSQKKADEDAQEKDDLNDAQKSDIDAETIPPLGNETDIKTNDDEEKDKPTGKKLSKRERRRRRRDFSSGEDSDDAYQYEMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00890060;
- 90% Identity
- iTF_01195210;
- 80% Identity
- -