Basic Information

Gene Symbol
F54F2.9
Assembly
GCA_035044765.1
Location
JAWNNQ010000877.1:19769-21652[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.8 3.3e+03 -1.4 0.0 8 39 25 56 22 62 0.57
2 3 8.6e-08 7.6e-05 23.0 0.0 4 38 303 340 300 341 0.89
3 3 3.7e-09 3.2e-06 27.4 0.5 3 43 392 437 390 439 0.92

Sequence Information

Coding Sequence
ATGCAGATCTCGTGGAAATCGGTGTGGCTACTGCTGACGACTCTCGTTTTAAGCGCACATGGCTGGGGGTCTGAAGAAATGGAAATTTTCGACTTGGTCGAGGAGatcaacaaaaacttttacGAGTTCATGGGCATTGCCCAGAATGCGACAAACAACGAGATAAAACGTGCCTTTCGTACGCTTTCTATAGTCTTGCATCCGGACAAAAACTCAGCCGAAGATGCTAACATACAGTTTCGAAATCTCGTATCCATCTATGAAGTTCTAAAAGATTCAAATAAACGCGAAAAGTATGACCGTGTGCTGAAAGATGGACTCCCTAACTGGAAGTCTGCGCTCTACTATTATCGACGTATGCGTAAGATTGGCCTGTACGAAGGCGCATTCATACTATTCATAATCGCAACCGTCGGTCAATATCTATTCGCCTGGGCCGCTTATCTGGAAAAGAAATACACTGCTGAGCAAGTATTCGGTACGAAGCTTAAGAGGTTGCAgaagaaaaataagaacatCGATATGGATGCAATACTTAAGGAAATACCAATACCATCGATTCTGAACACCTTACCCTTCCAAATTCCATTGGCTATTTGGCATTTGCCTAAAACCATAAAGGATGCATTTAGCAAAGCTAATGAATTAAAAGATTTAGCCCTGGAAAAACGAAGACAGGAACTAGAGGCAGTCAAACGTCAGGAAGAGTTAGAAAAGGAAGCAGAGGAACAAAGTCTAAAGCGTAAAGAACACAAAGAGAATCTGCgtaaacgaaaacaaaatacgAAAGCGCCCGAAAAAACCGAAGAGGAATTGCGGGGCTATGCTCAGATTCAGGCCCGAGAATTGACAGATAATGATGCCGTTAAGCCAGTAGCACAGAagACAACAGTTAGCGGTGGTTTTTGGACCGACGAAGACCTCGTTGAGCTTATACGTTTAGTAAAAAAATATCCTGGTGGTTCGAGTAGTCGTTGGAATACAATTGCAGAGGCCATGAATCGCACCGTACAGGAGGTTACCTTTATGGCTGCGAAAATGAAAGAGAATGGCTATAGAATACCCGGTCAAAGTGAGAGCGTTGCAGAGAACATTGTTCAAGCCACGCAAGTAGTTGTacggaaagagaaaataaagaAACCTGCCGAGAAGAGCATGCTCATACCTGAAACCAACTGGACTCAAGAGCAACAACGTGCTCTCGAAGCTGCCATTGTAAAGTACCGTAAGAACTCTAGCAGCGATCGTTGGCAAAAGATTGCAAACTGTGTGCCAGAGAAGACAAAAGAGGAGTGTTTAATACGGTATAAGTATTTATGCGAACTAGTAAAGTCACAAAAGAaggcagaagaagaagaagctctGGACGAAGACGAAGCAGGCAACTTTGCAAAACCATTGGCCGACTGTCCTACTACTGGGACTACTATCGATGACTCGACAAATACGAATAATGAATATGAAGCGGAAGAGGAACAGCTACAAGCTAGCAAAAAGCTTAGCAAACGTGAACGCCGGCGTCGTAAACAGGACTTTTCGAGCGGGGAGGATTCGGAGGACACGTATCAATATGAAATGAGTTAA
Protein Sequence
MQISWKSVWLLLTTLVLSAHGWGSEEMEIFDLVEEINKNFYEFMGIAQNATNNEIKRAFRTLSIVLHPDKNSAEDANIQFRNLVSIYEVLKDSNKREKYDRVLKDGLPNWKSALYYYRRMRKIGLYEGAFILFIIATVGQYLFAWAAYLEKKYTAEQVFGTKLKRLQKKNKNIDMDAILKEIPIPSILNTLPFQIPLAIWHLPKTIKDAFSKANELKDLALEKRRQELEAVKRQEELEKEAEEQSLKRKEHKENLRKRKQNTKAPEKTEEELRGYAQIQARELTDNDAVKPVAQKTTVSGGFWTDEDLVELIRLVKKYPGGSSSRWNTIAEAMNRTVQEVTFMAAKMKENGYRIPGQSESVAENIVQATQVVVRKEKIKKPAEKSMLIPETNWTQEQQRALEAAIVKYRKNSSSDRWQKIANCVPEKTKEECLIRYKYLCELVKSQKKAEEEEALDEDEAGNFAKPLADCPTTGTTIDDSTNTNNEYEAEEEQLQASKKLSKRERRRRKQDFSSGEDSEDTYQYEMS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00890060;
90% Identity
-
80% Identity
-