Lsal016404.1
Basic Information
- Insect
- Leucoma salicis
- Gene Symbol
- -
- Assembly
- GCA_948253155.1
- Location
- OX411826.1:13795781-13798138[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0063 4.7 8.1 1.6 18 43 9 31 7 32 0.93 2 19 0.51 3.8e+02 2.0 1.7 18 44 37 60 33 60 0.84 3 19 0.03 22 5.9 0.1 18 41 68 88 64 92 0.75 4 19 7e-05 0.052 14.3 0.8 17 44 98 122 95 122 0.94 5 19 0.014 10 7.0 2.7 18 44 129 152 128 152 0.94 6 19 5.4e-05 0.04 14.7 1.7 14 43 156 182 153 183 0.89 7 19 0.00066 0.49 11.2 0.4 17 44 188 212 184 212 0.88 8 19 0.0033 2.5 8.9 0.0 17 44 219 243 214 243 0.87 9 19 0.0007 0.52 11.1 0.1 14 44 256 283 248 283 0.90 10 19 0.042 31 5.4 0.3 6 43 299 331 294 332 0.83 11 19 9.9 7.3e+03 -2.2 0.2 18 29 339 350 337 355 0.79 12 19 1.3 9.6e+02 0.7 0.1 19 44 369 391 365 391 0.82 13 19 0.002 1.5 9.7 2.5 13 43 408 435 400 436 0.88 14 19 1.3 9.8e+02 0.6 10.6 6 29 430 453 426 465 0.70 15 19 0.0091 6.8 7.5 2.3 14 41 467 491 458 494 0.74 16 19 0.64 4.7e+02 1.6 3.8 15 44 497 523 487 523 0.84 17 19 0.98 7.3e+02 1.0 1.0 18 28 530 540 527 553 0.82 18 19 0.012 9 7.1 2.1 16 44 624 649 610 649 0.82 19 19 2.3 1.7e+03 -0.1 0.4 15 28 696 709 682 713 0.77
Sequence Information
- Coding Sequence
- ATGTATCAAAATCTACTGGACTTCATCTGTGACTATTGCTCAAGAACTTTCACAAGAAAATATAATTTACAAAATCATATAGAAAATTGTCATACAAAATGTTCCAGTCGGTGTGATATGTGCGGACAAAGTTATGGCAGCCCCACTGGCTTACTGCATCACATGTTCAGGGGACACAACAGCAATGGAAAACCATTCCCTGAATGCGATCTTTGTGGACGAACCTTCACAAGAAAACCACATATAATATCTCACATGATCACTGTTCATTTGCAAGGTTTAGGTGAAGAAATTAGGTGTAGATTGTGCGATAGAACTTTTACTACAGGTAGAAATTTAAAAAGACATATGAGTCAACAACACAATCCTAATGTTGAATATCCAACGTGCCATTATTGCGATAGAATTTTTAAAGGAAAACATTCTCTTATAGCACACATACACACAGTGCACAGTCTGAATGAGAGACAAGGAGCGAAATGCCATTTATGTGAGAAGGTGTACAGTAACAACCGCAATTTGAAACGACATATTGAAATGTTTCATGGGGATAAATCTGAATTTAAGTGTGATATATGCCCTAAAGTGTACACATCAAATCAGAGTTTGCGTAGACATTTACGAAATACACACAGTACGGATAGCAATGAACAGTTTGAATGTAATTATTGTAATAAAGCCTTTATTGGCAGAAGCAATTATGACAGTCATATCCAATTTAATCATCCAACTTCAGATGTTGATGCTAAGAGTGATGGTAAAAGCGAAGGAGAAATAATCTGCGAGTTATGTCATCAAGTTTACGAAGAAGAGTCTATGCTTCGTCAGCATATAAAAACAGAACATTCTTTCAAAGCATTTTACAAGTATTGCAGAAATGCTTTAATAAAACAACACCAGACTGAGTTTGCTAATAATGTCTATGGGTGTGAGTTTTGCCAACATAACTTTTCAAGTGTATATGAATTAAAAGACCATATGAGAGTAAACCATGACACAGAGTACTCTCTCTCAACCTGCAATGTATGTTTCAATAAGTTTTATTCTAAAGAAAGTATGAAAGCTCACAAAAAAGTTTGTATACCACCACCAGATGTGAAATCGTGCAGTCATTGTGATAAACTGTTTACTGTTATATCTAGTTTAGAATTTCACATTCGAATATTTCACCCCCAAGCTCAAATTGCAGACTCAAACATAACTTCATCTAACATTGTTGAAGAAAACACATCATTCAAGTGTGGTTATTGCAACCGTGTGTACTACAGTGACCGTTCATTGAAACATCATATAAAATTAAAACATACAACTGATGAGCAAGTTGAATGTGAGCACTGTAATAAGATTTGTAGCAATAAGTACTATTTAGCTTCTCATATTAAAATTGTTCACAACAATGATTCATGGTCTCAATGTGAATACTGTGATAAACAATTCAAATCTAAAAGAAATATAAGGAGACATGTTGAATACACACATTTAGGTATGCAAAGATATAAATGTATTGAGTGTGAGACATTGTTCAAAGAGAAACGTAGTCTACGAAAGCATGTTAGAACAAAACATCCAAATTCTGCTTTATTCCCACAATGTCACATCTGTCATAAACGATTTGAATCTGCGAAATCTTGCAAAATACATTTGAAACTATTACATTCTTTTAACATGAATACGTATCCATGCCACCTCTGTTCTGTGTCATTTAGCTCCAACGAGGCATTAAAGATTCATCTTAATATAAAACATTTAGCTGAAGATGAGATATACAAATGTCAAGATTGTAACCTGGTTTTCAAGGGCCAGGACAAATTTGATAACCACAATGAATTATGTCATGTAAATGTAGTTTCAAGTGTAAAGCAGAAAGTATCACCACGGTGCGTTCTCTGTATAAAAGACTTTAGTACCAGGAAAACTTTGAAAAGACATATTAAGAAGTTTCATAGTGAATTTGAAGTGGAAGAGTTGGTGAATTTTGGTTCTAGGGAGAAAATTTTCACCGTTGATTGTGAGGAATGTGTTAAGAATTTTGGGGATGATTTCTATTATAACATATACCAGAAGGTGAAGCATTTGAAAAATTCTGTTATTTTTAAATGTGAGACATGTCACACTTCCTATAGCTCTCTAGAGTATTCGGTACAACGGTACAAATTAAAAAACAGTGATGTGTCTAAAACTAAAGCTATCTTAAGTGAACTGTGTACTACTGAGATGAGCGAGGAAGAGACTGGGTTTTCCAGTGTTGGATTACTTCAAGAGTTGCCAGAAACCACTACAGAAGGACTATTAATTAAAGATGAGCCGGTAGATTTGGAGTATTATGATAAAATGAAAACTGAGCTGGAGTCGCCTTAA
- Protein Sequence
- MYQNLLDFICDYCSRTFTRKYNLQNHIENCHTKCSSRCDMCGQSYGSPTGLLHHMFRGHNSNGKPFPECDLCGRTFTRKPHIISHMITVHLQGLGEEIRCRLCDRTFTTGRNLKRHMSQQHNPNVEYPTCHYCDRIFKGKHSLIAHIHTVHSLNERQGAKCHLCEKVYSNNRNLKRHIEMFHGDKSEFKCDICPKVYTSNQSLRRHLRNTHSTDSNEQFECNYCNKAFIGRSNYDSHIQFNHPTSDVDAKSDGKSEGEIICELCHQVYEEESMLRQHIKTEHSFKAFYKYCRNALIKQHQTEFANNVYGCEFCQHNFSSVYELKDHMRVNHDTEYSLSTCNVCFNKFYSKESMKAHKKVCIPPPDVKSCSHCDKLFTVISSLEFHIRIFHPQAQIADSNITSSNIVEENTSFKCGYCNRVYYSDRSLKHHIKLKHTTDEQVECEHCNKICSNKYYLASHIKIVHNNDSWSQCEYCDKQFKSKRNIRRHVEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSALFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNEALKIHLNIKHLAEDEIYKCQDCNLVFKGQDKFDNHNELCHVNVVSSVKQKVSPRCVLCIKDFSTRKTLKRHIKKFHSEFEVEELVNFGSREKIFTVDCEECVKNFGDDFYYNIYQKVKHLKNSVIFKCETCHTSYSSLEYSVQRYKLKNSDVSKTKAILSELCTTEMSEEETGFSSVGLLQELPETTTEGLLIKDEPVDLEYYDKMKTELESP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00889782; iTF_00889469;
- 90% Identity
- iTF_00889782; iTF_00889469;
- 80% Identity
- iTF_00889782; iTF_00889469;