Basic Information

Insect: Leucania comma
Gene Symbol: chinmo_1
Assembly: GCA_958295575.1
Location: OY282468.1:22945851-22950732[-]

Transcription Factor Domain

TF Family: BTB
Domain: zf-C2H2|ZBTB
PFAM: PF00651
TF Group: Zinc-Coordinating Group
Description: The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 7e-20 3.6e-17 63.7 0.1 20 103 7 90 1 95 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	7e-20	3.6e-17	63.7	0.1	20	103	7	90	1	95	0.91

Sequence Information

Coding Sequence: ATGTATGTGAACTTTATTGGACGCCAGTTCAAAGCTCACAAGGTGATCCTGGCAGCATGCAGTAAGCACTTCCAGGAGCTCTTCGACACAGCGCCCCCTAGCCATGCTGGCGCTTGCTATGTCATTCTGGAGGCCACCTCGGCTGACAACATGCAGGCACTTCTCGAGTTCATGTACAAGGGTGAAGTGCATGTCAGCCAGGATGCGCTCTCCAGCTTCCTTAAGAGTGGGGAGAATTTGCAGGTCAAAGGCCTGTCGATGGAGATGTCTCAGGATGCTTGGGTGAAGCAACAGACCCAGCAGAATTCTGGAGACCGCCATCAGACTCGCATAAAGACAAGTCCGGTGTCAGGGTCAGGGAATTGTGAGGTGCAGGAGTCAGCTGCTCCGTCGTCACATACAGCCACGTTTGCTCCAATCATGCCTCAGTATGGGATGCCGATCCATGGCAGTGGCAGCATGGGGCGGTATGCTCCCCCAGCGCACTTGCCGATGCACGCGGGAGGGCACCGCAGACCAGCGCCGCCCAAGCAGTCACCGTCTCAAAGCCCACACGCTAGGAATTACAGGCAaagctcatcatcatcacactGTGGCAGCGTGGCTGATGAACCCGACACCCGCTCTTCTCCGGGCGCAGGCGCTCGCTACGAAGAGAACCCGCCTGACTGCACCTCGACCCTCGGCAACCCTATCAAGAACAACGGATATGAACGTAGCGCCAACGACGACATGCCTGAACGCTTAAACAATGACCAAGGTGCTGAAGatttacgGATAAAGAGTGAGAACGACTACCAACCACCAACTTATAACAACTCTCCGCCACCCGCGACGTCGCTGCCCAATGCTAACTACCACGATAAGCCAATGGAGACGTCGCCTGTGCCGCCTAAACCAAGCCCCGACATCTGGCCCGCCAAACTGATCACTAGCAAGTCTGGTGGAATCGCTACTGCTGACGGTAAAAAACTGAAATGCCCCTATTGCGAGAGACTTTATGGATACGAGACGAATCTGCGCGCCCACATCAGGCAGCGGCATCAGGGCATCCGCGTGCCGTGCCCGCACTGCTCGCGCACGTTCACGCGCAACAACACCGTGCGGCGCCACATCGCGCGCGAGCATCGCCACCAAGTCACCCCCCACCTCCCGAACCAAGGCCCCCTCCATAACCATACGCAGTAA
Protein Sequence: MYVNFIGRQFKAHKVILAACSKHFQELFDTAPPSHAGACYVILEATSADNMQALLEFMYKGEVHVSQDALSSFLKSGENLQVKGLSMEMSQDAWVKQQTQQNSGDRHQTRIKTSPVSGSGNCEVQESAAPSSHTATFAPIMPQYGMPIHGSGSMGRYAPPAHLPMHAGGHRRPAPPKQSPSQSPHARNYRQSSSSSHCGSVADEPDTRSSPGAGARYEENPPDCTSTLGNPIKNNGYERSANDDMPERLNNDQGAEDLRIKSENDYQPPTYNNSPPPATSLPNANYHDKPMETSPVPPKPSPDIWPAKLITSKSGGIATADGKKLKCPYCERLYGYETNLRAHIRQRHQGIRVPCPHCSRTFTRNNTVRRHIAREHRHQVTPHLPNQGPLHNHTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00001348;
90% Identity: iTF_00888498; iTF_00888818; iTF_01026474; iTF_01027554; iTF_01029474; iTF_01030402; iTF_01028835; iTF_01029763; iTF_01030443; iTF_01028524; iTF_01027502; iTF_01029423; iTF_01031282; iTF_01031318; iTF_01030744; iTF_01027866; iTF_01028474; iTF_01026907; iTF_01031580; iTF_00746017; iTF_00745954; iTF_00746340; iTF_01166881; iTF_00909026; iTF_00909379; iTF_00909060; iTF_01167238; iTF_00638282; iTF_01166930; iTF_00637849; iTF_00637951; iTF_01502309; iTF_01502249; iTF_01502587; iTF_00823558; iTF_01360898; iTF_01197996; iTF_01198290; iTF_01360850; iTF_01361202; iTF_00441684; iTF_00823188; iTF_01197943; iTF_00442076; iTF_00707181; iTF_00707471; iTF_00707136; iTF_01340769; iTF_01339074; iTF_01260322; iTF_01260622; iTF_01260278; iTF_01377634; iTF_00017537; iTF_01285698; iTF_01538978; iTF_01342628; iTF_00017800; iTF_01363306; iTF_00384205; iTF_01539245; iTF_01342350; iTF_01363567; iTF_00383860; iTF_01285748; iTF_01361814; iTF_01361878; iTF_01425590; iTF_01363255; iTF_01378007; iTF_01538935; iTF_00017496; iTF_01342393; iTF_01425306; iTF_01425244; iTF_01362142; iTF_00383903; iTF_01286047; iTF_00809379; iTF_00809676; iTF_00809329; iTF_00157350; iTF_00157675; iTF_00157399; iTF_00018636; iTF_00018322; iTF_00018359; iTF_00281907; iTF_00282583; iTF_00282968; iTF_00281536; iTF_01492514; iTF_01492166; iTF_01492222; iTF_00123523; iTF_00123846; iTF_01339566; iTF_00123571; iTF_00994499; iTF_00994534; iTF_00674442; iTF_00674772; iTF_00674487; iTF_00994845; iTF_00806949; iTF_00806887; iTF_00807271; iTF_00327492; iTF_00327248; iTF_00327220; iTF_00185764; iTF_00185501; iTF_00185472; iTF_01222095; iTF_01221811; iTF_01221757; iTF_00907236; iTF_00907501; iTF_00907197; iTF_01487845; iTF_01488168; iTF_01487895; iTF_00302279; iTF_00712481; iTF_00043109; iTF_01085925; iTF_00712071; iTF_00929191; iTF_01064808; iTF_01064875; iTF_00928908; iTF_00043725; iTF_00044077; iTF_00685680; iTF_01084432; iTF_00042802; iTF_00928850; iTF_01062034; iTF_00685619; iTF_01085555; iTF_00040404; iTF_01084468; iTF_00043765; iTF_01063349; iTF_00302678; iTF_01063894; iTF_00301719; iTF_01063959; iTF_01065175; iTF_01084759; iTF_01062968; iTF_01062076; iTF_00685949; iTF_01064253; iTF_01532253; iTF_00301343; iTF_00040032; iTF_00042848; iTF_01062368; iTF_00000801; iTF_00000485; iTF_00000528; iTF_00726945; iTF_00726597; iTF_00726696; iTF_00952897; iTF_00952853; iTF_00953143; iTF_00147810; iTF_00148100; iTF_00147663; iTF_00831394; iTF_00831748; iTF_00831442; iTF_00038307; iTF_00364201; iTF_00364526; iTF_01440243; iTF_00038036; iTF_00364247; iTF_00037978; iTF_01440315; iTF_01440603; iTF_00001348; iTF_00001325; iTF_00001626; iTF_00973924; iTF_00974253; iTF_00973984; iTF_00449477; iTF_00449745; iTF_00449335; iTF_00870181; iTF_00869822; iTF_00869856; iTF_01231176; iTF_01230786; iTF_00850921; iTF_00852299; iTF_00851313; iTF_00851963; iTF_00852029; iTF_01332971; iTF_01333354; iTF_00300780; iTF_00300389; iTF_01192941; iTF_01192860; iTF_01193248; iTF_00623379; iTF_00623636; iTF_00622997; iTF_00374357; iTF_00374785; iTF_01527894; iTF_01527495; iTF_00636665; iTF_00637072; iTF_00425979; iTF_00425594; iTF_00036989; iTF_00037396; iTF_00039005; iTF_00039397; iTF_00375870; iTF_00375465; iTF_00171999; iTF_00172360; iTF_01247679; iTF_01247276; iTF_01118471; iTF_01118856; iTF_01117493; iTF_01118581; iTF_01119862; iTF_00112151; iTF_01119515; iTF_00111805; iTF_01117885; iTF_00925352; iTF_00924937; iTF_00925040; iTF_00445417; iTF_01532650; iTF_00445370; iTF_00445725; iTF_00822185; iTF_00822125; iTF_00822511; iTF_00450634; iTF_00450320; iTF_00450355; iTF_01093290; iTF_01093338; iTF_01093658; iTF_00795021; iTF_00795321; iTF_00794844; iTF_00772174; iTF_01526639; iTF_01526230; iTF_00772217; iTF_00772512; iTF_00122642; iTF_00667762; iTF_01095155; iTF_01095476; iTF_00121974; iTF_01095094; iTF_00121661; iTF_00121600; iTF_00237902; iTF_00177697; iTF_00810307; iTF_00050438; iTF_00906374; iTF_00274601; iTF_00177323; iTF_00273771; iTF_00274573; iTF_00273807; iTF_00274071; iTF_00906679; iTF_00810616; iTF_00050106; iTF_00906330; iTF_00050139; iTF_00238333; iTF_00810270; iTF_00274879; iTF_00889461; iTF_00889752; iTF_00889404; iTF_00933218; iTF_00931617; iTF_00932807; iTF_00932053; iTF_00785334; iTF_00785654; iTF_00785376; iTF_00784577; iTF_00783724; iTF_00783668; iTF_00784535; iTF_00784024; iTF_00784829; iTF_00668066; iTF_00667684; iTF_00122962; iTF_00122558; iTF_00786406; iTF_00786122; iTF_00786170; iTF_00071639; iTF_00071708; iTF_00071934; iTF_00758779; iTF_00758428; iTF_00758461; iTF_00041405; iTF_00041058; iTF_01534092; iTF_01534157; iTF_01534415; iTF_01535089; iTF_01533214; iTF_01533566; iTF_01535455; iTF_01152317; iTF_01152681; iTF_00678142; iTF_00677814; iTF_00173791; iTF_00173232;
80% Identity: iTF_00888498; iTF_00888818;