Atri012427.1
Basic Information
- Insect
- Abrostola triplasia
- Gene Symbol
- chinmo
- Assembly
- GCA_946251925.1
- Location
- CAMIUJ010000049.1:2499463-2506329[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2e-06 0.003 17.7 0.1 10 44 377 408 375 408 0.91 2 2 0.005 7.7 6.8 3.2 17 44 412 436 410 438 0.85
Sequence Information
- Coding Sequence
- ATGCACACATGCATGATAAGCGTTTGTAGGTCCCGTAATGGGGCCAATGTCAGTTATGTTGCAAGCTGCGCAAGCGACCAATGTCGTTTGCTCATTTCCTCGTTACGGCGCGGAGCGGCGGGCGGCGCGCGGCGCGGGCGCAACGGTGGGCGCATGCGTTGTGAAACTGCAGTGATATATGCGTTGATGGGACGCCAATTTAaagcgcataaggtgatcctagccgcatgcagtaaacacttccaggagttgttcgacactgccccgccgagccatgccggagcgtgctacgtcatcctggaagccacaacggctgacaacatgcaggctctcctggagttcatgtacaaaggagaggtgcatgtcagccaggatgcgctctccagcttcctcaagagtggagagaatttgcagGTCAAAGGCCTGTCGATGGAGATGTCCCCGGATGCATGGGTAAAGCAGCAAACCCAGCAGAGTTCTGGAGACCGCCATCAAACTCGCATCAAGACGAGCCCGGTATCAGGGTCAGGGAATTGTGAGGTTCAGGAGTCCGCTACTCCATCGTCGCATACCGCCACTTTCGCTCCGATCATGCCACAGTATGGGATGCCGATTCACGGCAGTGGCAGCATGGGGCGATATGCCCCGCCAGCCCACTTGCCTCTGCACACTGGCTCGCACCGCAGACCGGCGCCTCCGAAGCCGTCTCCGTCTCAGAGCCCACACGCTAGGAATTACAGGCAAAGCTCATCTTCTTCGCACTGTGGCAGTGTGGCTGACGAGCCCGATACTCGCTCTTCGCCGGGTGCAGGCACTCGTTACGAGGAGAACCCACCTGACTGCACATCGACCCTCGGCAACCCGATCAAGAACAACGGATATGAACGCAGCGCTTCGGCTAACGATGAAATGGGTGAACGTTTGTCCAACGACCAAGGCGCTGAAGATTTACGGATAAAGAGTGAGAACGACTACCAGCCGCCCGGGTACAACAACTCTCCGCCGCCGGCCACCTCGCTGCCTAACGCTAACTACCACGACAAGCCGATAGAGACATCGCCGGTGCCGCCCAAGCCGAGCCCCGACATCTGGCCTACTAAACTGATCACGAGCAAATCTGGAGGAATCGCTACTGCTGACGGCAAAAAACTGAAATGTCCATACTGTGAGAGACTCTACGGATACGAGACAAACCTGCGCGCCCACATCAGGCAACGGCATCAGGGCATCCGAGTGCCGTGCCCGCACTGCTCGCGCACCTTCACGCGCAACAACACCGTGCGCCGCCACATCGCACGTGAACATCGCCACCAGGTCACACCCCACCTCCCCAACCAAGGCCCTCTTCACAACCATACGCAGTAA
- Protein Sequence
- MHTCMISVCRSRNGANVSYVASCASDQCRLLISSLRRGAAGGARRGRNGGRMRCETAVIYALMGRQFKAHKVILAACSKHFQELFDTAPPSHAGACYVILEATTADNMQALLEFMYKGEVHVSQDALSSFLKSGENLQVKGLSMEMSPDAWVKQQTQQSSGDRHQTRIKTSPVSGSGNCEVQESATPSSHTATFAPIMPQYGMPIHGSGSMGRYAPPAHLPLHTGSHRRPAPPKPSPSQSPHARNYRQSSSSSHCGSVADEPDTRSSPGAGTRYEENPPDCTSTLGNPIKNNGYERSASANDEMGERLSNDQGAEDLRIKSENDYQPPGYNNSPPPATSLPNANYHDKPIETSPVPPKPSPDIWPTKLITSKSGGIATADGKKLKCPYCERLYGYETNLRAHIRQRHQGIRVPCPHCSRTFTRNNTVRRHIAREHRHQVTPHLPNQGPLHNHTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00001325; iTF_00001626; iTF_00195297; iTF_00195585; iTF_00195323; iTF_00746017; iTF_00745954; iTF_00746340; iTF_01222625; iTF_01223015; iTF_01222669; iTF_00933218; iTF_00931617; iTF_00932807; iTF_00932053; iTF_00038307; iTF_00038036; iTF_00037978; iTF_00709509; iTF_00709415; iTF_00709800; iTF_01018722; iTF_01019055; iTF_01018749; iTF_01018209; iTF_01017897; iTF_01017875; iTF_01246082; iTF_01246451; iTF_01246110; iTF_01260322; iTF_01260622; iTF_01260278; iTF_01503170; iTF_01503462; iTF_01503136; iTF_00897028; iTF_00897414; iTF_00897108; iTF_01504356; iTF_01504044; iTF_01504084; iTF_00870181; iTF_00869822; iTF_00869856; iTF_01502309; iTF_01502249; iTF_00707181; iTF_00707471; iTF_01502587; iTF_00707136; iTF_00823558; iTF_01360898; iTF_01360850; iTF_01361202; iTF_00441684; iTF_00823188; iTF_00442076; iTF_00157350; iTF_00157675; iTF_00157399; iTF_00448294; iTF_00448335; iTF_00448636; iTF_01082056; iTF_00279267; iTF_00006444; iTF_00006418; iTF_00279314; iTF_00279602; iTF_01081747; iTF_00006709; iTF_01081788; iTF_01430086; iTF_01430382; iTF_01430111; iTF_00820230; iTF_00290882; iTF_00819684; iTF_00429189; iTF_00819333; iTF_00429222; iTF_00820296; iTF_00290858; iTF_00428298; iTF_00788139; iTF_00428335; iTF_00429520; iTF_00787857; iTF_00819379; iTF_00820563; iTF_00787830; iTF_00291159; iTF_00428631; iTF_00236775; iTF_00237098; iTF_00235980; iTF_00236019; iTF_00236819; iTF_00236284; iTF_01490289; iTF_01490328; iTF_01490621; iTF_00209032; iTF_00209429; iTF_00209088; iTF_00925352; iTF_00924937; iTF_00925040; iTF_01338120; iTF_01337863; iTF_01154657; iTF_00204482; iTF_00204770; iTF_01154403; iTF_01157989; iTF_01158118; iTF_01159879; iTF_01159561; iTF_00923021; iTF_00923250; iTF_00922996; iTF_01156789; iTF_01157015; iTF_01155928; iTF_01160120; iTF_00204505; iTF_01155516; iTF_01158364; iTF_01154237; iTF_01155679; iTF_01157312; iTF_00077705; iTF_00078003; iTF_00077658; iTF_00346025; iTF_00345974; iTF_00346361; iTF_00822185; iTF_00822125; iTF_00822511; iTF_00450634; iTF_00450320; iTF_00450355; iTF_00876330; iTF_00875463; iTF_00874675; iTF_00875796; iTF_00874614; iTF_00876662; iTF_00874940; iTF_00018636; iTF_00018322; iTF_00018359; iTF_01377634; iTF_00017537; iTF_00374785; iTF_00726945; iTF_00952897; iTF_00147810; iTF_01027554; iTF_01029474; iTF_01030402; iTF_01230786; iTF_01285698; iTF_01538978; iTF_00809379; iTF_00810307; iTF_01028835; iTF_01029763; iTF_00148100; iTF_00973924; iTF_00039397; iTF_00300389; iTF_00449477; iTF_00726597; iTF_00906374; iTF_01527495; iTF_00017800; iTF_00172360; iTF_00726696; iTF_01231176; iTF_00274601; iTF_00364201; iTF_00850921; iTF_01026474; iTF_00273771; iTF_00852299; iTF_01030443; iTF_00300780; iTF_00809676; iTF_01028524; iTF_01247276; iTF_00274573; iTF_00384205; iTF_00974253; iTF_01539245; iTF_00237902; iTF_00364526; iTF_01027502; iTF_00147663; iTF_00273807; iTF_01029423; iTF_01526639; iTF_00449745; iTF_00809329; iTF_00851313; iTF_01031282; iTF_00623379; iTF_01440243; iTF_00037396; iTF_00383860; iTF_00623636; iTF_01285748; iTF_00374357; iTF_00622997; iTF_00952853; iTF_01031318; iTF_01526230; iTF_01527894; iTF_00274071; iTF_00364247; iTF_00449335; iTF_00906679; iTF_00953143; iTF_01378007; iTF_01538935; iTF_00017496; iTF_00810616; iTF_01030744; iTF_00425594; iTF_00906330; iTF_01027866; iTF_01028474; iTF_00425979; iTF_00851963; iTF_01026907; iTF_01440315; iTF_01440603; iTF_01031580; iTF_00036989; iTF_00039005; iTF_00238333; iTF_00852029; iTF_00810270; iTF_00171999; iTF_00274879; iTF_00383903; iTF_01247679; iTF_01286047; iTF_00973984; iTF_00357036; iTF_00355368; iTF_00355755; iTF_00356462; iTF_00355448; iTF_01334041; iTF_01334409; iTF_01197996; iTF_01198290; iTF_01197943; iTF_01492514; iTF_01492166; iTF_00281907; iTF_00282583; iTF_00282968; iTF_01492222; iTF_00281536; iTF_00197517; iTF_00197493; iTF_00197756; iTF_00408909; iTF_00408602; iTF_00408637; iTF_00752578; iTF_00752270; iTF_00752224; iTF_00772174; iTF_00772217; iTF_00772512; iTF_01387758; iTF_01386338; iTF_01386883; iTF_01385960; iTF_01388717; iTF_01386927; iTF_01387247; iTF_01341552; iTF_01387795; iTF_01388661; iTF_01341846; iTF_01389046; iTF_01341468; iTF_01388094; iTF_01386016; iTF_01222095; iTF_00185764; iTF_01221811; iTF_00185501; iTF_01221757; iTF_00185472; iTF_00327492; iTF_00000801; iTF_00000485; iTF_00000528; iTF_00327248; iTF_00327220; iTF_00275888; iTF_00275477; iTF_00275549; iTF_00806949; iTF_00806887; iTF_00807271; iTF_01403977; iTF_01403659; iTF_01403607; iTF_01173440; iTF_01173803; iTF_00888432; iTF_00888498; iTF_00888818; iTF_01425590; iTF_01425306; iTF_01425244; iTF_00178801; iTF_00178384; iTF_00365105; iTF_00365397; iTF_00365081; iTF_00961091; iTF_00961462; iTF_00961144; iTF_00796689; iTF_00796667; iTF_00796958; iTF_00833233; iTF_00833667; iTF_00421522; iTF_00419874; iTF_00420164; iTF_00420676; iTF_00420971; iTF_00421500; iTF_00419901; iTF_00421792; iTF_01312385; iTF_01312678; iTF_01312338; iTF_00114562; iTF_00114218; iTF_00114266; iTF_01078690; iTF_01080073; iTF_01080044; iTF_01078351; iTF_01078389; iTF_01080347; iTF_01506530; iTF_01507371; iTF_01507693; iTF_01508240; iTF_01507411; iTF_01506806; iTF_01508502; iTF_01508217; iTF_01506491; iTF_00390563; iTF_00390924; iTF_00390589; iTF_00986403; iTF_00985345; iTF_00843686; iTF_00696141; iTF_00843949; iTF_00986768; iTF_00985617; iTF_00695832; iTF_00985304; iTF_00843710; iTF_01080867; iTF_01079202; iTF_01079491; iTF_01081176; iTF_01079226; iTF_01080894; iTF_00681764; iTF_00681800; iTF_00683819; iTF_00683505; iTF_00683542; iTF_00682011; iTF_00826437; iTF_00825971; iTF_00826038; iTF_00925925; iTF_00925895; iTF_00926223; iTF_00433671; iTF_00432453; iTF_00433290; iTF_00432401; iTF_00432758; iTF_00433344; iTF_00737095; iTF_00008208; iTF_00008529; iTF_00736753; iTF_00008178; iTF_00736789; iTF_00786951; iTF_00787251; iTF_00787000; iTF_00859655; iTF_00859688; iTF_00860020; iTF_00112649; iTF_00112976; iTF_00112671; iTF_00419113; iTF_00419153; iTF_00419417; iTF_00948393; iTF_00948110; iTF_00948051; iTF_00027978; iTF_00027021; iTF_00027927; iTF_00027066; iTF_00027386; iTF_01092202; iTF_01092683; iTF_01092269; iTF_01151338; iTF_00802468; iTF_00354341; iTF_01021448; iTF_00353323; iTF_00802059; iTF_00354702; iTF_01151696; iTF_00354321; iTF_00353298; iTF_00802100; iTF_01151381; iTF_01021849; iTF_01021498; iTF_00353696; iTF_00257419; iTF_00257143; iTF_00257085; iTF_00824907; iTF_00783052; iTF_00775425; iTF_00781186; iTF_00781159; iTF_00775400; iTF_00779656; iTF_00781448; iTF_00781992; iTF_00777097; iTF_00775691; iTF_00782765; iTF_00774639; iTF_00779631; iTF_00781968; iTF_00774897; iTF_00778897; iTF_00779154; iTF_00782802; iTF_00778163; iTF_00776820; iTF_00776853; iTF_00782262; iTF_00778423; iTF_00774616; iTF_00778136; iTF_00778873; iTF_00779900; iTF_01125068; iTF_01124784; iTF_01125622; iTF_01124727; iTF_01125980; iTF_01125664; iTF_01359020; iTF_01359346; iTF_01359061; iTF_00261997; iTF_00262033; iTF_00262289; iTF_00256175; iTF_00256471; iTF_00256095; iTF_00682959; iTF_00682571; iTF_01437585; iTF_01437241; iTF_01437278; iTF_01335572; iTF_01335152; iTF_01083863; iTF_01251973; iTF_00007622; iTF_01417003; iTF_01417355; iTF_00007276; iTF_00762189; iTF_01416397; iTF_01417037; iTF_00761840; iTF_01416048; iTF_01252369; iTF_01416081; iTF_00007319; iTF_01252026; iTF_00761883; iTF_01083515; iTF_01083551; iTF_00187320; iTF_00187674; iTF_00187356; iTF_00144795; iTF_00145162; iTF_00825211; iTF_00824934; iTF_01194002; iTF_01193754; iTF_01193728; iTF_00710675; iTF_00711145; iTF_00710358; iTF_00710394; iTF_00323668; iTF_00323643; iTF_00323932; iTF_00208437; iTF_00208065; iTF_00889461; iTF_00889752; iTF_00889404; iTF_00076086; iTF_00077125; iTF_00075704; iTF_00076730; iTF_00076798; iTF_00249857; iTF_01496162; iTF_01130180; iTF_00250087; iTF_01494472; iTF_00249833; iTF_01130153; iTF_01115850; iTF_00180620; iTF_01494447; iTF_00180658; iTF_01495186; iTF_01495924; iTF_01116085; iTF_01494709; iTF_01115831; iTF_01495417; iTF_01495163; iTF_00180924; iTF_01495902; iTF_01130431; iTF_01280932; iTF_01280617; iTF_01280540; iTF_01279495; iTF_01279441; iTF_01279806; iTF_00858733; iTF_00858773; iTF_00859102; iTF_00468336; iTF_00467536; iTF_00467574; iTF_00468311; iTF_00467836; iTF_00468606; iTF_00724113; iTF_00724088; iTF_00724377; iTF_00074707; iTF_00075085; iTF_01281491; iTF_01281525; iTF_01281846; iTF_01282492; iTF_01282936; iTF_01073783; iTF_01074075; iTF_01073756; iTF_01426085; iTF_01426061; iTF_01426330; iTF_00622441; iTF_01333354; iTF_01332971; iTF_00622170; iTF_00622140; iTF_01302552; iTF_00640642; iTF_00012166; iTF_00012554; iTF_00073362; iTF_00641012; iTF_00072981; iTF_00640569; iTF_01302938; iTF_00012219; iTF_00073023; iTF_01302591; iTF_00013313; iTF_00013643; iTF_00013234; iTF_00720580; iTF_00146630; iTF_00146933; iTF_00146584; iTF_00720506; iTF_00720893; iTF_01220818; iTF_00651910; iTF_01220791; iTF_00652312; iTF_01221120; iTF_01565238; iTF_01564850; iTF_00758779; iTF_00758428; iTF_00758461; iTF_01331835; iTF_01332179; iTF_01337403; iTF_01337035; iTF_00151164; iTF_00150794; iTF_00041405; iTF_00041058; iTF_00302279; iTF_00712481; iTF_00043109; iTF_01085925; iTF_00712071; iTF_00929191; iTF_01064808; iTF_00445417; iTF_01532650; iTF_01064875; iTF_00928908; iTF_00043725; iTF_00044077; iTF_00685680; iTF_01084432; iTF_00042802; iTF_00928850; iTF_01062034; iTF_00685619; iTF_01085555; iTF_00040404; iTF_01084468; iTF_00043765; iTF_01063349; iTF_00302678; iTF_01063894; iTF_00301719; iTF_01063959; iTF_01065175; iTF_01084759; iTF_01062968; iTF_00445370; iTF_01062076; iTF_00445725; iTF_00685949; iTF_01064253; iTF_01532253; iTF_00301343; iTF_00040032; iTF_00042848; iTF_01062368; iTF_00678142; iTF_00677814; iTF_00173791; iTF_00173232; iTF_01076000; iTF_01075664;
- 90% Identity
- iTF_00888432;
- 80% Identity
- iTF_00001325; iTF_00001626;