Lsyp001202.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- Lrrfip2
- Assembly
- GCA_032872505.1
- Location
- CM065468.1:21204055-21208170[-]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-114 5.8e-110 368.6 32.1 1 300 29 327 29 327 0.96 2 3 0.0027 1.3e+02 3.1 2.8 122 171 327 376 325 380 0.92 3 3 0.01 4.7e+02 1.2 0.3 209 239 373 402 369 402 0.84
Sequence Information
- Coding Sequence
- atggaGTCATCGGTAGCTGGACGAAGACGAACTGCCACAAGGCATTCTGCTGAAGATCAAGCTTTAGATCAAATTGCCAAAGAGgCAGAAGCGAGATTGGCAGCTAGACGACAAGCGAGAGCCGAAGCTAGAGAAATTCGAATGCGTGAATTAGAGAGACAGCAAAAGGAAGCTGAGGAAAACGCAGATCGTGTCTACGACATGTGTACAGccGACAGTAATCGCGCAATGAGAGTTACGCCAGATCCAATCAGAACATCTCGTCTACTtgcaaattcaaataattttcagtcTAGTCGAAGATCATCTGAAGATTCATTGGAGGATGCTGGCCTTGGTAGAGACCCCAGGGTGGAACTGAAGGAGTTTGAGGAGAAATTTCGAAAAGCAATGATTGCAAATGCACAATTGGACAATGAGAAATCATCTTATGCTTATCAGGTGGATTTATTGAAGGATAAATTAGAAGAATTAGAGGAGACAGTTGCGCAATTGCGAAGAGAATTGAGAGAAAAGAATCGTGACGCTGAGCATTTAAAACGCGTTAGTCAAAGGTTGAAGGAAGATTTCGATATGTGTAGAGCTCAATTAATAGAAAGAGATACATTAATTCAgGAAAATGGTTTAGTAATAGTTGAGGATGAAGGAAGTGACAGTGAAGAAGTGGAGGGAGAAAATGGTCTTCGTTCAAGAAAAAGAGTTTTAGTTAGTACAGAAGCTGCCGAAGTATTGCAGAATGCCGGAGAAGGATCTTTAGatGTCCGGTTAAGAAAATTCGCGtcggagaaaaaggaattgcAGGACGAAATTCGACACCTAAGGTTAGAAGTTGAAGAGGCACGAAATCGTATGAGGCCTGAAAGAACTGCAGGTTTGATGTTAGGTGGATTTTCAGATTCAGAGGATATTCAACGCGAGGCCAATAAATTGATCGCTGACTATAAATTTAAACTACAAAAAGCCGAGCAAGATATGTCGACACTTCAGGCGACAGTCGCCAGGCTAGAGAGTCAAGTGATTCGTTACAAATCAGCCGCTGAAGCATCGGAAAAAGCCGAAGACGaattaaaagtggaaaaaagaaaactacAAAGAGAGttCCGAGAGTCACAAGGACGTGTTGAGGAACTCGAAACTGCCAACACCCATTTACAACGAAGATTAGATAAGTTGAAAAATGCAAGATCTactcttttaaaagaaatttga
- Protein Sequence
- MESSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADSNRAMRVTPDPIRTSRLLANSNNFQSSRRSSEDSLEDAGLGRDPRVELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVAQLRRELREKNRDAEHLKRVSQRLKEDFDMCRAQLIERDTLIQENGLVIVEDEGSDSEEVEGENGLRSRKRVLVSTEAAEVLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLEVEEARNRMRPERTAGLMLGGFSDSEDIQREANKLIADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREFRESQGRVEELETANTHLQRRLDKLKNARSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00460519;
- 80% Identity
- iTF_00882025;