Lsyp021607.1
Basic Information
- Insect
- Leptopilina syphax
- Gene Symbol
- TFIP11
- Assembly
- GCA_032872505.1
- Location
- CM065472.1:36798998-36811749[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.8e-97 7.5e-93 312.4 18.0 1 275 404 671 404 671 0.98 2 2 0.022 3.5e+02 1.9 0.0 243 272 684 713 676 719 0.88
Sequence Information
- Coding Sequence
- atgtccGAAGATGAAATGGAAAGTTTTGAGATCACAGATTACGATCTTGACAATGAATTTAATACAAATCGTTTTCGTCGAAAACTTACTAAACAACAACAAATGCTTGGAATGTGGGCCGATAGTGATGAGGAAGAAGAAACAAGTAGACCTTCATTTAGAAATACGAAAAAAGTTCCAAAAAATTATACGGCACCAGTTAGTTTTGTTTCTGGAGGTATTCAACAATCGGGAAAACCAAAGGAAGAGAAAAAGGCAGATAAAAATGCTGCtgatgatgatgacgatgatgatgatgatgatgatacgGGTAGACCTCGAAGAGGTGATGCCGATTATGTTCCAAATAGTTCCagtgATTCGGAAAATGAAGGTCCCAGCAATATGAGGACACGTAAACAATTTTCGTTAAACTTAGAGGGTGAAATTGCTggtttaagaaaaaagaaagcaCCACTTAATCCTGCACTTATAGAAACAGGCATGGGAACCTGGGAAGTACACACACGAGGGATTGGAGCAAAAATTCTACTTCAAatgGGTTTTGAACCCGGTAAAGGTTTGGGTAAAAAATTGCAAGGTATCAGCGCCCCTGTTGAGGCGCATTTACGTAAAGGACGCGGCGCAATTGGTGCTTATGGTCCAGAAAAATTTGCCAAAGTcccagaaaaaaagaaagagaaaaccAATGACGATGTAAAGGAGCAAAAAGTTAAAGTTTCACATTGGCGTAAGGGCGATGCAACTGTcaataagaaaaaaacaaaatacacCTATCGCAGTGTCGATCAAGTACTCGAGGATGGAAAACATCGAATGAATCGAAAAATACCGGCAACTAGCGAAATGAGCCGCGTTAAAGTTATCGACATGACTGGTCCCGAGCAACGTGTCTTAAGCGGTTATCATGCAATTGGAAGCGGTCAACAACGTCCCGATgagacaattttaataaatgataaaaaattaaagtgtaaTTTTTCCGTACCCGAACTTCAGCATAATTTAAATCTTCTCGTTGATATGTGCGAGCAGgatataatacaaaataatcgACGGAATGTAACGCTTGGCGATCGTTTAATTGCCCTTGAGGCTGAGAGGAcacgtaattttaaaattgttgatcATCAGAAAAAGTTAATTGACACTTTAGAAGATGTTTTGTGTATTGTCAATCGTTTAATGGACGAGAGCAGTGAATTGACATTGACGCAAACAGCTGAGGCTTTTAAAAATCTTCAGGACAAATATCATGAGGAATATAAACTCTATGAATTGGGCGAATTGGCCATTAGTTTGGTGTGTCCAAAAATAAAGGAATCATTGACATCGTGGAATCCGCTCATGCAACCGAGACAATCGATTGATTTGTTTAAACAGTGGAAGGAGATTTTGGAAATTGGAAAAACAACTCTTCAATCGAGTTCATTGCAACCTTATGATCAACTTGTATGGAACGCTTGGATGCCTTCAATCAGAGGAGCCGTTTTGGAGTGGACCTGCAGACACCCGGATCCCCTAATCGATCTGATTGAAAATTGGATGCCCCTGTTACCAGTTTGGATTTTCGAGAATATCCTCGATCTTCTGGTTCTTCCGAAACTCACGCTTGAAGTTGAAGAATGGAATCCATTGACCGACACGGTACCAATTCATACTTGGATCCATCCTTGGCTTCAGCTCTTACgtcATCGActtgacaatttaatttatcCGATAATTCGACGTAAACTTGGTTCGGCTCTGGGTGGATGGCACGCTTCGGATAGGTCGGCACGTTTAATGCTTGAGCCATGGGCTGAAGTTTTTACACCCGGTGATTTAGAGgcatttttagtgaaaaatattgTGCCGAAATTGCAGATTGCCCTCAGTGAACTTGTGATAAATCCACATCAACAAATTCTCGATCAATGGCATTGGGTTTATGAGTGGAAGGAACTTCTGCCAAAGCACACAATGGTTGGTCTACTTGATAAATTCTTCTTTCCAAAATGGTTGCAAATATTGGCACTTTGGCTGAATAGTTCACCAAATTATGACGAGATCACGCACTGGTACTTGGGCTGGAAGGGAATGCTCAGCGAGAAATTACTCGCCGAACCGGTAATTAGTGAATATTTCAAAAAGGCATTGGAAATGATGAATAGAGCTGTTTCCGTGCCACAAGGACTTCAACCGGGAGCTGTTGAACAAGTTTCATATTTGACAATTCTCGAGAGAAGTCAACCTGTTCACCAAATACCTTCTAATATTCAGCCGAGAGTTGAGAGTATTGCGGAAGCAATGAGGATCGTGAATCAAATTCCACATGGATtcaaagatttcgtgcaaaagaAATGTGAGGAACGAGGAATTCTCTTTATGCCAATACCAAATAAATATCGAGAAGCAAAACAAGTGTACAAAGTGGGAAATTTACAGGCGTACATTGATGGAAAGGCTCTTTTTGTTTGCCATGGCGGTACTAATTGGGTGCCAACTAATCTCAACACTTTACTTGACAAGTGtgatatgtaa
- Protein Sequence
- MSEDEMESFEITDYDLDNEFNTNRFRRKLTKQQQMLGMWADSDEEEETSRPSFRNTKKVPKNYTAPVSFVSGGIQQSGKPKEEKKADKNAADDDDDDDDDDDTGRPRRGDADYVPNSSSDSENEGPSNMRTRKQFSLNLEGEIAGLRKKKAPLNPALIETGMGTWEVHTRGIGAKILLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKFAKVPEKKKEKTNDDVKEQKVKVSHWRKGDATVNKKKTKYTYRSVDQVLEDGKHRMNRKIPATSEMSRVKVIDMTGPEQRVLSGYHAIGSGQQRPDETILINDKKLKCNFSVPELQHNLNLLVDMCEQDIIQNNRRNVTLGDRLIALEAERTRNFKIVDHQKKLIDTLEDVLCIVNRLMDESSELTLTQTAEAFKNLQDKYHEEYKLYELGELAISLVCPKIKESLTSWNPLMQPRQSIDLFKQWKEILEIGKTTLQSSSLQPYDQLVWNAWMPSIRGAVLEWTCRHPDPLIDLIENWMPLLPVWIFENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLQLLRHRLDNLIYPIIRRKLGSALGGWHASDRSARLMLEPWAEVFTPGDLEAFLVKNIVPKLQIALSELVINPHQQILDQWHWVYEWKELLPKHTMVGLLDKFFFPKWLQILALWLNSSPNYDEITHWYLGWKGMLSEKLLAEPVISEYFKKALEMMNRAVSVPQGLQPGAVEQVSYLTILERSQPVHQIPSNIQPRVESIAEAMRIVNQIPHGFKDFVQKKCEERGILFMPIPNKYREAKQVYKVGNLQAYIDGKALFVCHGGTNWVPTNLNTLLDKCDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879629;
- 90% Identity
- iTF_00880445;
- 80% Identity
- -