Lcla016028.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- tfip11
- Assembly
- GCA_001855655.1
- Location
- JUFY01035281.1:38246-41620[-]
Transcription Factor Domain
- TF Family
- GCFC
- Domain
- GCFC domain
- PFAM
- PF07842
- TF Group
- Unclassified Structure
- Description
- This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.7e-95 7.5e-91 305.1 18.8 1 275 399 666 399 666 0.98 2 2 0.011 1.5e+02 2.4 0.0 244 272 680 708 671 723 0.78
Sequence Information
- Coding Sequence
- atgtctGAAGATGAAATGGAAAGTTTCGAAATCACTGATTATGATCTggataatgaatttaatacaaatCGTTTTCGGCGAAAACTTACGAAAAAACAACAAATGCTTGgaATGTGGGCCGATGATAGTGATGAGGAAGAGGAAACGAGTAGACCGTCTTTTAGAGTTACGAAAAAAGTGCCAAAAAATTATACAGCTCCAGTTAGTTTTGTCTCTGGTGGTATTCAACAAGCGGGAAAACCaaaggaagagaaaaaaaccGACGATAATGACGATGAAGACGATGAAATTGGCAGACCTCGAAGAGGAGATGCCGATTATGTTCCAAACAGTTCTAgtgATTCTGAAAGCGAAGGACCTAGCAATATGAGGGCAcgtaaacaattttcttcattaaatttgGAGGGCGAAATTGCCGGTCTAAGAAAGAAAAGGGCACCTCTTAATCCAGCGCTGATAAAAACCGGCATGGGAAGTTGGGAAGTTCATACAAGAGGAATCGgtgcaaaaattttacttcaaATGGGTTTTGAACCTGGTAAAGGTTTGGGTAAAAAATTGCAAGGTATAAGCGCTCCGGTGGAGGCGCATTTACGCAAAGGGCGCGGAGCAATTGGCGCCTATGGTCCAGAGAAACTAGCAAAAATTCCGGAGAAAAAGAAGGAGGACATCATCAATGACGAATCAAAGGAGCAAAAGGGGAAAGTTTCACATTGGCGCAAGGGCGACGCAGGcaacaagaaaaaaacgaaatacaCCTATCGAAGTGTCGATCAAGTACTTGAGGATGGTAAACTTCGAATGAATCGAAAAATGCCAATGGCGAGTGAAATGAGCCGTGTTAAAGTTATAGACATGACTGGTCCCGAGCAACGTGTCCTAAGTGGTTATCATGCAATTGGAAGCGGTCAACAGCGTCCCGACGAGACAATCACGATAAGtgacaaaaaatcgaaatgcAATTTTTCCGTGCCAGAACTTCAGCATAATTTGAATCTCCTCGTTGAAATGTGTGAGCAAGATATTATTCAGAATAATCGACGAAATGGAACACTTGGCGATCGATTGATTGCCCTCGAGGCGGAGAGGAcacgaaattttaaaattgtcgatcatcagaaaaaattgattgacaCCTTGGAAGACGTTTTGCATATTGTCAATCGTTTAATGGACGAGAGTAATGATCTGACATTGACGCAAACAGCCGAGGCTTTTAGAAATCTTCAGGAGAAATATAACGAGGAATATAAACTTTATGAATTGGGTGAATTAGCCATTAGTCTCGTGTGTGCGAAAATTAAGGAATCATTGGTTACATGGAATCCGCTCATGCAACCGAGACAGTCGATCGATTTGTTTAAACAGTGGAAGGAGATTTTGGAAGTTGGGAAAACAACACTACAGTCTAGCTCATTGCAACCGTACGATCAGCTAGTGTGGAACGCGTGGATGCCTTCAATGAGAGGAGCCGTTCTAGAGTGGACTTGCAGACAACCAGATCCCCTAATCGATCTGATAGAACATTGGATGCCCCTATTGCCAGTTTGGATTTTCGAGAATATTCTCGATCTGCTGGTGTTGCCGAAACTCACGCTTGAAGTGGAAGAATGGAATCCATTAACGGATACGGTACCAATTCACACTTGGATTCATCCTTGGCTTCAGCTCTTACGTCATCGACtagacaatttaatttatccgATAATTCGACGTAAACTTGGTTCGGCTCTGGGTGGTTGGCACGCGTCCGATAGATCGGCAAGATTGATGCTCGAGCCATGGGCAGAAGTATTCACGCCTGGCGATTTGGAGGCATTCCtggtgaaaaatattgtccCGAAATTGCAGATTGCACTTAGCGAACTTGTGCTTAATCCGCATCAACAAATTCTCGATCAATGGCATTGGGTGTACGAGTGGAAGGAACTTTTACCGAAGCATACAATGGTTGGATTACTggataaattctttttccccAAATGGCTGCAAATATTAGCCCTTTGGCTTAATAGTTCACCGAATTATGACGAGATCACGCACTGGTACTTGGGCTGGAAGGGTATGCTCAGCGAGAAATTACTCGCTGAACCGATAATTagtgaatatttcaaaaaagcaTTGGAAATGATGAACAGGGCTGTTTCTGTGCCACAAGGACTTCAACCCGGAGCTGTTGAGCAAGTTTCATATTTGACGATTCTCGAGAGAAGTCAACCTGTTCATCAAATACCTTCAAATATTCAGCCGAGAGTCGAGAGTATCGCCGAAGCAATGAGGATCGTAAATCAAATTCCACACGGATTTAAAGATTTCGTGCAGAAAAAATGCGAGGAACGGGGAATTCTCTTTATGCCAATACCAAACAAATATCGAGAGGCCAAACAAGTGTACAAAGTGGGAAATTTGCAGGCGTACATTGACGGAAAGGCTCTTTTTGTCTGTCACGGCGGCACCAGTTGGGTACCAACTAATCTCAACACTCTACTCGACAAGTGTGATatgtaa
- Protein Sequence
- MSEDEMESFEITDYDLDNEFNTNRFRRKLTKKQQMLGMWADDSDEEEETSRPSFRVTKKVPKNYTAPVSFVSGGIQQAGKPKEEKKTDDNDDEDDEIGRPRRGDADYVPNSSSDSESEGPSNMRARKQFSSLNLEGEIAGLRKKRAPLNPALIKTGMGSWEVHTRGIGAKILLQMGFEPGKGLGKKLQGISAPVEAHLRKGRGAIGAYGPEKLAKIPEKKKEDIINDESKEQKGKVSHWRKGDAGNKKKTKYTYRSVDQVLEDGKLRMNRKMPMASEMSRVKVIDMTGPEQRVLSGYHAIGSGQQRPDETITISDKKSKCNFSVPELQHNLNLLVEMCEQDIIQNNRRNGTLGDRLIALEAERTRNFKIVDHQKKLIDTLEDVLHIVNRLMDESNDLTLTQTAEAFRNLQEKYNEEYKLYELGELAISLVCAKIKESLVTWNPLMQPRQSIDLFKQWKEILEVGKTTLQSSSLQPYDQLVWNAWMPSMRGAVLEWTCRQPDPLIDLIEHWMPLLPVWIFENILDLLVLPKLTLEVEEWNPLTDTVPIHTWIHPWLQLLRHRLDNLIYPIIRRKLGSALGGWHASDRSARLMLEPWAEVFTPGDLEAFLVKNIVPKLQIALSELVLNPHQQILDQWHWVYEWKELLPKHTMVGLLDKFFFPKWLQILALWLNSSPNYDEITHWYLGWKGMLSEKLLAEPIISEYFKKALEMMNRAVSVPQGLQPGAVEQVSYLTILERSQPVHQIPSNIQPRVESIAEAMRIVNQIPHGFKDFVQKKCEERGILFMPIPNKYREAKQVYKVGNLQAYIDGKALFVCHGGTSWVPTNLNTLLDKCDM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00879629;
- 90% Identity
- iTF_00879629; iTF_00882959; iTF_00882022; iTF_00881241;
- 80% Identity
- -