Ldro040789.1
Basic Information
- Insect
- Leptopilina drosophilae
- Gene Symbol
- Hr39_2
- Assembly
- GCA_032873175.1
- Location
- CM065487.1:36121783-36126058[+]
Transcription Factor Domain
- TF Family
- SF-like
- Domain
- zf-C4|SF-like
- PFAM
- AnimalTFDB
- TF Group
- Zinc-Coordinating Group
- Description
- The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.36 4.2e+03 -1.9 5.2 73 165 174 287 125 304 0.56 2 4 4 4.6e+04 -6.6 8.0 74 149 309 389 291 400 0.43 3 4 6.7e-08 0.00078 20.3 0.0 1 21 491 511 491 516 0.92 4 4 4.6e-73 5.4e-69 234.9 0.0 86 408 546 849 520 849 0.82
Sequence Information
- Coding Sequence
- ATGTCAGAGCAAAATGGGCCCACGGAGGGCCCGGGCTGGTGGCCCCCGGCACAATCTTGGAAGTTACAGTCGGCCATGCCATCACGCACCTCGGAGACCGGGAAGAACGTCTCCGTCACGACAATTAACGTGCTACCGGCCCACGATATGCACGacgGTAAAAGTGTATGCAAGTATCTTGGAGGACAGAATGGCGTGACAGTATCCGTAGTATCGAACTGTGGATCCGGTGTCATTGATTCCGGCACCAGCATCGGATCCACAGAATCAACGAACGTTAACGACGTAGAGGACAGCGATGGCGAAGTGAGCAAAATTGACTTCCGCGGGGTAAATTTGCGCACAAAAAAGAAGCACGACAACGAAAGTTGCGATGACAATTTACAGCAACAACCAGAAAGGCCCATGTCCTGGGAAGGTGAACTATCAGACCAGGAAATGTCTTCCAATACCATCACAAATCAGGACCTCGAAGAAACATCAATGGAAGGAGTTCAAGTTTGTAGTACAAGTCCTGGACCACAGGAGCAAAAGTTCCCAATAAAACCAGAACCCGACTTTCGATCTAGTCCAGGACTCATTGGTTTGAATGACACTGTTCTTCCCTTGTCTCATGCTCAACAAGCCCAACAGCATCAACGTTTGGAGAGTCTGGAGCAAACACAACAGAACGATCTTCCCTTGCTTGTTGGCAAACTCCTGGGAGGCTACAACCCTAATCATAGTCCAGTACTGAATCCACGACATCATCTCACTAAACACAGTCATACCAGATCGCAGGTTCCATCGCCTGACTCTGCGATTCATTCAGCTTATAGTGTGTTCAGTTCGCCAACGCAAAGTCCACATGCGGCTAGACACTCGGCACTGGGTCCGGGAAGTCCAGTACCATCATCATCACTATCTCTGTCACGTCACAGTTTCAACAATTCCACTTCCTCTCTGTCCTtgtctctctctcactctctctcaaGAAACAATTCCGACGCGTCGAGTAGTTGTTACAGTTACGGATCCCTAAGTCCCCCGACGCACTCGCCAGTTCAGCAGAGACACGCACATCCGCAGCATCATCACCAGGTAGCGCAAGGTAGTCCCATGCACCTACCAGCATCGTCCACAGGGTCCACAGGGTCCACAGGTCACTATTCAACGCCAGGTTCCGAGATTTCCTCGGAGGGTCACCCTGAAGATCAGGACGACTGCCGAATACCCTCCGCACCCACTGGGATTTCAACCAGACAACAACTAATCAACAGTCCTTGTCCGATTTGTGGCGACAAGATTAGCGGTTTTCACTACGGCATCTTCTCCTGTGAGTCCTGCAAGGGCTTCTTCAAACGCACCGTTCAGAATCGGAAAAACTACGTCTGCCTAAGGGGTGTCGGTTGTCCGGTGACAGTGGCAACCCGAAAGAAATGTCCCGCTTGCCGCTTCGATAAGTGTCTAAACATGGGTATGAAATTGGAAGCAATAAGGGAGGACAGAACACGAGGTGGTCGTAGTACCTATCAATGCACGTACACACTACCAGCGAATCTCATTGGCAGTCCTGCCGGCGGGATGTCTGGTGACAAAATGACGGGTGGATCCTGCAGTCCAGCACCTCCGGGTTCGGAGCATCATCATCAGATGCGACATCACTCGAACCACTCTCACAAAATGCAGGCAGTGCCTCAACTCTTGCAGGATATTATGGACGTCGAGCATCTGTGGCATTACAACGACAATGACAGAGTTGGCAGTCAGAACAGTACCACTCCGAATAGTGATTCCCTACTAGGTGGCGGAACATCAAACGGAGCGACTACTACCAATGGAAACATAAACAGTGGCGAGTCCGCAAGGCCCAGTTCAACTGGACCCATAACCAATAATCACGATCATCAACAATCATCAAATGTCAATGCCACCCAAACACCCAACACAAATCCAAACGGTAATCCAACACAACATCCCGACTTCTTGTCAAATCTGTGCAATATCGCCGATCATAGACTCTACAAAATTGTCAAATGGTGTAAAAGCTTGccattattcaaaaacatctcGATTGATGATCAAATTTGTCTACTCATCAACTCTTGGTGTGAGCTATTGCTCTTTTCTTGCTGTTTCCGAAGTATGAGCACTCCTGGCGAGATACGTGTTTCCCTAGGAAAATCAATCACACTAGAGCAAGCTAGACAACTCGGCCTGGCTACCTGTATCGAGAGGATgcttactttcacaaataatcTCAGGCGACTCAGGGTGGATCAATACGAATACGTCGCGATGAAGGTGATAGTTCTCCTAACATCCGACACGAGTGAATTGAAGGAACCGGAAAAAGTCAGAGCTTCACAGGAGAAAGCACTTCAAGCCCTTCAGCAATATACAATCGCCAGGTATCCAGAGATGCCAGCAAAATTCGGCGAACTACTACTCAGGATTCCTGATTTACAAAGAACGTGCCAAGCGGGAAAGGAATTGTTGAGCGCAAAGCGTGCCGAGGGTGAGGGTTGTTCGTTTAATCTTCTCATGGAGTTGTTACGTGGGGACCATTGA
- Protein Sequence
- MSEQNGPTEGPGWWPPAQSWKLQSAMPSRTSETGKNVSVTTINVLPAHDMHDGKSVCKYLGGQNGVTVSVVSNCGSGVIDSGTSIGSTESTNVNDVEDSDGEVSKIDFRGVNLRTKKKHDNESCDDNLQQQPERPMSWEGELSDQEMSSNTITNQDLEETSMEGVQVCSTSPGPQEQKFPIKPEPDFRSSPGLIGLNDTVLPLSHAQQAQQHQRLESLEQTQQNDLPLLVGKLLGGYNPNHSPVLNPRHHLTKHSHTRSQVPSPDSAIHSAYSVFSSPTQSPHAARHSALGPGSPVPSSSLSLSRHSFNNSTSSLSLSLSHSLSRNNSDASSSCYSYGSLSPPTHSPVQQRHAHPQHHHQVAQGSPMHLPASSTGSTGSTGHYSTPGSEISSEGHPEDQDDCRIPSAPTGISTRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCLRGVGCPVTVATRKKCPACRFDKCLNMGMKLEAIREDRTRGGRSTYQCTYTLPANLIGSPAGGMSGDKMTGGSCSPAPPGSEHHHQMRHHSNHSHKMQAVPQLLQDIMDVEHLWHYNDNDRVGSQNSTTPNSDSLLGGGTSNGATTTNGNINSGESARPSSTGPITNNHDHQQSSNVNATQTPNTNPNGNPTQHPDFLSNLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSMSTPGEIRVSLGKSITLEQARQLGLATCIERMLTFTNNLRRLRVDQYEYVAMKVIVLLTSDTSELKEPEKVRASQEKALQALQQYTIARYPEMPAKFGELLLRIPDLQRTCQAGKELLSAKRAEGEGCSFNLLMELLRGDH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00059522;
- 90% Identity
- iTF_00881353; iTF_00881273; iTF_00882056; iTF_00882217; iTF_00882993; iTF_00882066; iTF_00883005; iTF_00883101; iTF_00879658; iTF_00879669; iTF_00879803;
- 80% Identity
- iTF_00881353; iTF_00881273;