Basic Information

Gene Symbol
ARID4B
Assembly
GCA_032873175.1
Location
CM065487.1:22871326-22882454[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-27 8.1e-24 85.2 0.1 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGTTGGGAGACGATCCACCTTATCTATCCGTGGGGACGGAGGTTAGTGCCAAGTACAAGGGTGCATTTTGTGAAGCGAAGATCAGAAAAGTCGTGAGATCGGTAAAATGTCGTGTAACCTACAAGCAAGGATTGGGTACTGCAACAGTAACGGATGAGCAAATTAAAGGAACATTGAGAGTTGGCGCTTCAGTGGAAGCGCGGCACAATGATCGAAAGGATTTTATCGAGGCAACAATAACGAAAATTCAGGATTGTAGTCAGTACACGGTTGTTTTTGATGATGGCGATATCACGACATTGAGAAGAACTGCTCTTTGTTTGAAAAGTGGGCGGCATTTTGCCGAAAGTGAAACATTGGATCAGCTTCCCTTAACGCATCCGGAGCACTTTGGAAATCCCGTGATTGGCGGTAGACGAGGACGTCGATCCCGACAGGCACAagaTGATAGCAGTGAAGACGAGGGAAGTCCTCCTAGGGGTTCACACGATTCCGGAACAGGTGGCGAGGAGAAGGAAGGATTGGAAGTCGAACCGGAAATCGGTCGAGTCGTTTGCGTGGAACTCGGCGACAAGAAGAAGAAGGACAATTGGTTTCCAGGACTCGTGGTCGCGCCAACCGCACAGGACACTGTGAGAATTCGCGTCAAGGATGATTATCTCGTTCGTTCGTTTAAGGACGCGCGATATTATACAGTGCCGAAGAAGGAGGCGACGGAATTCACAAAAGATTTAGGCAACAAAGTGGAGAATAGTGCATTGAAAGTTGCCGTTGAAAAGGCACTTTTGTTCctggagaaaaatgaattgCCACCGCATTGGGATAAGGATTCACTGTTTGGCAATTCAGTGTCAAGTGGAAATAGCGATTCGGACGGTGATATTGATTCAGACAGTTCGGACGATGAGCCACGTGAGGAGAAGGATCATTTTGTCGCGCAACTGTATAAATTCATGGACGATCGTGGCACGCCTATTAATAATTGTCCAATGATCGGTGAGGAGGATATCGATCTTTATCGACTATTCCGGGCTGTTTACAAATTAGGCGGCTATAATCGTGTCACGAATCAAAATCAATGGAAAATCATAACTCGTCGTTTGAGTTTTTCGATGCAAAGCAATCCAGCGACGCACAATCTTGTCAAGCAGGCGTATAAGAAATTTTTGCATTCCTTTGAGGATTTTTACAGGAAGTTGGGTTGTACGATGGTGAATCATCCCCGGGGCAGTGTGAGGAAGCAACGACCCGGTCGCAGTTTGATACGCGACAAGGACAGGAACACGCCAATTCCGCCACAAGTTAAGACTGAGAAGGAGGACGAGGAGAAGAAGGTTGAGGAGGAGAAGAAGGAGAAGCGCGAAGTGAAAAAGGAAGTCGAGGAAGTACCGAAAATAGTcaagaagaaagaaaaggaaaaagagaaggaaaaggagaaagagaaagagaaggaaaaagaaaaggagaaagaaaaagagaaggagAAGGAGAAGGAAAAAGAGAAGGAGAAAGAGAAGGAAAATCAAAAAACGATCCTTCTCGAAAAGGAGAAAGAGGAGTCGGAAAGTTTGAGCGGACAGGAGAGTGATGTGAACGTCGAGGAGGAGGAGTCTTCAAGTAGTGAGAATTCGAAAAAAGCGAGGTATAATTCACTGAACAGAGGGAAGGCGAAGGAGGAAAAGAAACCTAAGGAAGAGAAGAAGAAAGTTCTCGAGAAGAAGAAAATCGAGAAGAAACAGGAGAAAAAGGAGGAGAAAATCGAGAAGAAGGAGGAGGACACTGCGAAAACGAGAACAAAAGCAAAAGATGAAGCGATAAAGGGAAAAGCAGTGGTGGAAACCCGAGAGTCTAGAACTCCGTCCAGAGAAACGGAGAAGAAGGCAACTTTCTCGAAGCAGAGGCGCCTCACGGAGGAGGAAATGAAAAAACGAGGACGTAAACGTAAAGACACGGACGGAGAGAAGACTCGAAGCACCGAGGAGCCGATCGATTACGCTCCTTCGTACAAAGGACCCGTCGTCCTAGGCGATAAATTAAAAGTCTACTACGGCCCCAATCACGAGTCGAAAGTCACCTACGAGGCGAAGGTCATTGACGTCGAGGACGACGATACAGAGCCTCTTTACCTCGTCCACTACACCGGTTGGAATACAAGATACGACGAATGGATCAAAAGCTCCCGAATTGCCCAGAACTTCACCCAGAGTCAAGGCAGAGTGAAACGAACAAAAACCGTCTCTCGTCCCCCAACGCCAGGCGCGTCCGGAAATGGTAAATCGATAAAAGCCGTCACTCCCGTGTCGCAGACCCGAAGACGAGCGCAGAGTGTCGCTCCCACCCCGGGCACGCCGACAATGCTCAAGGAATCAAAAGTCATTGACGCCGACAAGGACGACGCCGAGTCCGACGATCTCGTCGATTACAGCGACTGGAACACCGGTTACGACGATTTCTACAAGGGTCAAGGTCGCGTCAAGAGAAAAAAGGCCTTTCCCAGACCAGCGACTCCCGGACCATCGGGAAATGGAAAGGCGGTGAAAAATCCCGTCACTCCCGTCTCACAAACACGGCGACGAGCCCAAAGTGTGGCACCATCTCCAGGAACGTCGTCAATGATCAAGGAGGGAAAGAAGGAGGAAACGGCGAAGGAGAGGTCGACTACGCCCGTCTTTGGTCCCGGGGCCAAGAGTCCAGCGACACCGGCCACCGGGCGCTTGAGTCGAGCCACGCGAAACGCCGACACTGGCATTGAATTGCGACGACGAACGCGGAGAACGTCCGGTCACACTGACGTGACGGCCGCTTCCGAGAGCGAGGACACGGATTCATACGAATCGGACGCGACCGAACCGGAGCAAAGGGCCGCCTCCAAGGAGAAGGAGGAAGGCACTCGACGCGAGGCGAAACGACGAGCGGAGACCAAAATAAAAATGGACGCCAGTGAAGGCGAGGACGAGAAAGAACAAATCGAAGAACCCCGACGAGGGCGTAGACTCCGTAGGAATTTGAACAAAATCGCCGAAGTTAAATCCGAACCCGAGAGCGATGAGGAGCAACCAAAAGGCCGCGACTTCGATCTCAATCAAATTCGCTCCGAACTAAAGGGCTTCGACAAAGCCGTCAAAATGGAAATAATTCGTGTCGAACCCGAAGTCGAGGAGGACGTGAAACCAACCATCGAACCACTTCTCCCAAGTccggaaaaaatcgaaaaaatcgaaaaagaaaaaatcgaaaaactaaaGCGAATCGAGGAGGAAAAGGAAAAGAAACGCCTCGAGGAGGAAAAGGAGAAGAAACGAATAGAGGAGGAAAAGGAGAAGAAAAGAATAGAggaagaaaaggagaaaagaagAATAGAGGAAGAAAAGGAGAAGGAAAAGAAACGAATAGAGGAGGAAAAGGAGAAGAGAAGAATAGAGGAAGAAAAGGAGAAGGAAAAGAAACGAATCGAGGAGGAAAAGGAGAAGGAAAAGAAACGAATAGAGGAGGAAAAGAGGGAAACAAAAGTCGACACTGAAATAAAGTCCGAGAGCACTGAAGACATTTACGAATTCAAAGAACCAGAACCATTCGAGTTCGAAGTGAGAAACAAATCCGGCGACAAGGACAAACTAAAGAGACGAGTATTTGACGACAACGTCAAAAGTAGTCCGAAGAAGAAACAAAAGACCTCGCCATTGCCAAAGGAAACAAAACCAGACGATACGGAACGAAAGAAAATCATTCGCAAACCATTTATGAAAAAACTTGACgaaccaccaccaccaccaccatcGCAAGCCCAGGAAGAAAATCTACCCCGTCCCCTATTACAATCATCCTGGAAATGCGAGGAAGCCTTCGACAAACTCTGCAATGAAACATACAACCAAAAAACACCCATTGTCGACGAAACGAAAAATCTCGATCTTCTTTTCAACGATTTACCCGGCGATGACGATTCCGCCATTGACGATCCCGAGGATCGTTTAATAATCTCCGAAACCGAGACCGAAGAGAATTTATTCTCCTACCAACAGGAAATATTCCCCCCAAACGAAGTCGAACAAGAAAAAGTCAAAACACCACCACCACAATTACCATCGATTCCAATTGTCGAAGCAAAATTGACACCCCCTTTAATTCCAAAACCCCCATCGCCGAAAATCGAGCCAAAAACACTCGATTTTCCCACCATTGTTCCAATGCCAATAAGTGCGCGACTACCCGTCACTTCCtcgattgaagaaaaattatccGCCGCCGCTGCTTTTcgtaacaaaacaaaagaatcGAAGAAAGACGACACCGATCAGGAGTCGTCGATTAAAAAGTCAATCTTCAAGGACAAGGAATCGACCCGAAAATCGGAGCTCAATCGTCGAGTGAAAGAGGAGAAGATAAAGCTCGAAGTGGAGaagaaagaaagcaaaaaagacGATATCGATGAAGAGAAAACTCAGCCTCCATCCTCGAAAGTAAAAGAAGCAGTTAAGGAGATCGAGCGAAGAATCGAGAGCGAAGCCTCCCAGAAGctagaactaaaaaaattttccaccaTCATCAAGACCGAAGAAAAGGAGGAGAAGTGGAAGGAGAAGTTCCAAGAGGACGATCAAAAGCTAAATATCGAATTTACCGACTCTACGGACAGTAGTGATTCGGAAAAACGACTAATAATCGACAATGAAATTGACTTTATTAACGAAGAGCCGAAATTCGACGTGAAATTAGGAAACGAACGCGCCGAACGCTCCTTAACGAAAATTCAACCCGAACGAACAATCATCAAGAATCCAAAGGAGAAAAATCCAATAGTCAAGAATCAAATCAAGAACTTGGAACTAAAGAATCAAAAAAGTCAAGTGAAAAACATCAAGagtgagaaaattaaaaatcccatTTTAAAGAAGGGACAGGATgtgaaaatagaaacaaaaaatgaacCCGAAAAGCTTGATGGTAAGAATCAGATATCGGTCGTTAAGAATCCAGAAAGACCCTTAATGATGAAGCAGCACGAGCGTGGTTTGAGTTTGAAACTAAATCAAGCGGCAAAGGTGAATTTCGACAAAGCAACAAATCAAAAAGTTGACATTGTCGAACCTTTGCAGAATCAAGTTCTCCGCTTGCAGCAAGCTGGTCTTCAGTATAAATGCACTCGAGTCGACGAAGAGGGCGAGAATTTAAATTCCCTTCTCTGCGAGGAGGAAATTCCCGGATCGCCAACACCGGGAATTGACGTTATTGATCACGAAGCACCAGGTACGTCGCACACAACACCAAAGGCAAAAATCGCCGACAATTCCCTTGTTCTCATGGAAATGCCCTTTGCAAGTGCACCAACGTCGAGTCCAACGAGTTGCGCGACAATTTCAACATTGAGCATGTCCCTACCGCAGAATAGTGGCAATCCACTGATTTCCGTGCCAATGCAGGTGCAACAGTGTCAAAGGCAGGAAATTCCACGACAAGAGAGCAATGAAGCTGCACCGGTGATGGACAATACACCGCCAACGACGCCCGACTCGAGTATATCGAATATGTGCGAATCGCCGAGGGAAGAGGGAACGGCGGGTTCGAGTCCAATGAGTGGCGATGATAATAATTTGAAGCAGCATCATCGCGACAGCAGTGAAATGGAGAACGATGGGAAAATCGTCGGTCTCAGTGAGGACGATGGTTCGTTGATGAATCTCGAGGGACAGAGTGTGGAACGGCCGTTGAAGCAGATGAAGAAGACGATGGTAACGTCGACGGCGACGGCGATGACGACGACAACGACGACGATGGTTATTGATGAGACAACGGTGTCGAAGAAGAGAAAACGCAATAGATCGCAAACGGAATTGGGCAGTAATTCGGGGAAAAAATCGCCGAGACAATCGGGAAGAAGTGGACGACATGGCGGCGCTGGGAGTGATAGCGATGACACCAGCGAGGAATCGAATCAATGCAGTAGCGCTAATTCTATTCCGACGAATCATAGTAATGTCACATTGACGGAATTGAATAGTTATTCGTCGAGGTCGCCCAGGCCAACGAAGTACAATTTCTTTGTCGAATTGAATCCTGAGTGGGATGGAAGTCAAAGAATAGCGGTTCTTCAACAAAAACTTTGTGAACTTCGAAAAACTTATAATGCAGTTAAAGTGGAATTGGCAACTATTGAGAGACGTCGAAAAAAGCTCAAAAGACGAGAACGAGAAGCAATCAAAGCAGCCAAAGCAGAAATGCAACAAGCCTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDEQIKGTLRVGASVEARHNDRKDFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGSHDSGTGGEEKEGLEVEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVKDDYLVRSFKDARYYTVPKKEATEFTKDLGNKVENSALKVAVEKALLFLEKNELPPHWDKDSLFGNSVSSGNSDSDGDIDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGEEDIDLYRLFRAVYKLGGYNRVTNQNQWKIITRRLSFSMQSNPATHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSVRKQRPGRSLIRDKDRNTPIPPQVKTEKEDEEKKVEEEKKEKREVKKEVEEVPKIVKKKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKEKENQKTILLEKEKEESESLSGQESDVNVEEEESSSSENSKKARYNSLNRGKAKEEKKPKEEKKKVLEKKKIEKKQEKKEEKIEKKEEDTAKTRTKAKDEAIKGKAVVETRESRTPSRETEKKATFSKQRRLTEEEMKKRGRKRKDTDGEKTRSTEEPIDYAPSYKGPVVLGDKLKVYYGPNHESKVTYEAKVIDVEDDDTEPLYLVHYTGWNTRYDEWIKSSRIAQNFTQSQGRVKRTKTVSRPPTPGASGNGKSIKAVTPVSQTRRRAQSVAPTPGTPTMLKESKVIDADKDDAESDDLVDYSDWNTGYDDFYKGQGRVKRKKAFPRPATPGPSGNGKAVKNPVTPVSQTRRRAQSVAPSPGTSSMIKEGKKEETAKERSTTPVFGPGAKSPATPATGRLSRATRNADTGIELRRRTRRTSGHTDVTAASESEDTDSYESDATEPEQRAASKEKEEGTRREAKRRAETKIKMDASEGEDEKEQIEEPRRGRRLRRNLNKIAEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKMEIIRVEPEVEEDVKPTIEPLLPSPEKIEKIEKEKIEKLKRIEEEKEKKRLEEEKEKKRIEEEKEKKRIEEEKEKRRIEEEKEKEKKRIEEEKEKRRIEEEKEKEKKRIEEEKEKEKKRIEEEKRETKVDTEIKSESTEDIYEFKEPEPFEFEVRNKSGDKDKLKRRVFDDNVKSSPKKKQKTSPLPKETKPDDTERKKIIRKPFMKKLDEPPPPPPSQAQEENLPRPLLQSSWKCEEAFDKLCNETYNQKTPIVDETKNLDLLFNDLPGDDDSAIDDPEDRLIISETETEENLFSYQQEIFPPNEVEQEKVKTPPPQLPSIPIVEAKLTPPLIPKPPSPKIEPKTLDFPTIVPMPISARLPVTSSIEEKLSAAAAFRNKTKESKKDDTDQESSIKKSIFKDKESTRKSELNRRVKEEKIKLEVEKKESKKDDIDEEKTQPPSSKVKEAVKEIERRIESEASQKLELKKFSTIIKTEEKEEKWKEKFQEDDQKLNIEFTDSTDSSDSEKRLIIDNEIDFINEEPKFDVKLGNERAERSLTKIQPERTIIKNPKEKNPIVKNQIKNLELKNQKSQVKNIKSEKIKNPILKKGQDVKIETKNEPEKLDGKNQISVVKNPERPLMMKQHERGLSLKLNQAAKVNFDKATNQKVDIVEPLQNQVLRLQQAGLQYKCTRVDEEGENLNSLLCEEEIPGSPTPGIDVIDHEAPGTSHTTPKAKIADNSLVLMEMPFASAPTSSPTSCATISTLSMSLPQNSGNPLISVPMQVQQCQRQEIPRQESNEAAPVMDNTPPTTPDSSISNMCESPREEGTAGSSPMSGDDNNLKQHHRDSSEMENDGKIVGLSEDDGSLMNLEGQSVERPLKQMKKTMVTSTATAMTTTTTTMVIDETTVSKKRKRNRSQTELGSNSGKKSPRQSGRSGRHGGAGSDSDDTSEESNQCSSANSIPTNHSNVTLTELNSYSSRSPRPTKYNFFVELNPEWDGSQRIAVLQQKLCELRKTYNAVKVELATIERRRKKLKRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
-
80% Identity
-