Basic Information

Gene Symbol
ARID4B_1
Assembly
GCA_015476425.1
Location
JABAIE010000043.1:4822333-4839513[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-27 9.8e-24 85.1 0.1 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGTTGGGAGACGATCCACCTTATCTATCCGTGGGGACGGAGGTTAGTGCCAAGTACAAGGGTGCATTTTGTGAAGCGAAGATCAGAAAAGTCGTGAGATCGGTAAAATGTCGTGTAACCTACAAGCAAGGATTGGGTACTGCAACAGTAACGGATGAGCAGATTAAAGGAACATTGAGAGTTGGAGCATCAGTGGAAGCGAGGCACAATGATCGAAAGGATTTTATTGAGGCAACAATAACGAAAATTCAGGATTGTAGTCAGTACACGGTTGTTTTTGATGATGGCGATATCACGACATTGAGAAGAACTGCTCTTTGTTTGAAAAGTGGACGTCATTTTGCCGAAAGTGAAACATTGGATCAGCTTCCCTTAACGCATCCGGAGCACTTTGGAAATCCCGTGATTGGCGGTAGACGAGGACGTCGATCCCGACAGGCACAAGATGATAGTAGTGAAGACGAGGGAAGTCCTCCTAGAGGTTCACACGATTCCGGCACAGGTGGCGAGGAGAAAGAAGGATTGGAAGTTGAACCAGAAATCGGTCGAGTCGTTTGCGTGGAACTCGGTGACAAGAAGAAGAAGGATAATTGGTTTCCTGGACTTGTAGTCGCACCAACGGCACAGGACACTGTGAGAATTCGCGTCAAGGATGATTATCTCGTTCGTTCGTTTAAGGACGCGCGATATTATACAGTACCGAAAAAGGAGGCGACGGAATTCACAAAAGATTTAGGCAACAAAGTGGAGAATAGTGCACTGAAGATTGCCGTTGAAAAGGCACTTTTGTTTCTCGAGAAAAATGAATTGCCACCACATTGGGATAAGGATTCACTGTTTGGCAATTCGGTGTCAAGTGGAAATAGCGATTCTGATGGTGATATTGATTCAGATAGTTCTGACGATGAGCCACGTGAGGAGAAGGATCATTTTGTTGCGCAATTGTATAAATTCATGGACGATCGTGGCACACCAATTAATAATTGTCCAATGATCGGTGAGGAGGATATCGATCTTTATCGACTATTCCGGGCAGTTTACAAATTGGGCGGTTATAATCGTGTCACGAATCAAAATCAGTGGAAAATAATAACTCGAAGGTTGAGTTTTTCGATGCAAAGCAATCCAGCGACGCACAATCTTGTCAAACAGGCTTATAAGAAATTTTTGCATTCCTTTGAGGATTTTTATAGGAAGTTGGGTTGCACGATGGTGAATCATCCTCGGGGCAGTGTGAGGAAGCAACGACCCGGTCGTAGTTTGATACGCGATAAGGATAGGAACACGCCAATTCCGCCACAAGTTAAGACTGAGAAGGAGGAGGAAGAGAAGAAAGTCGAGGAGGAGAAGAAGGAGAAGCGGGAAGTGAAAAAGGAAGTCGAGGAAGTGCCGAAAATAGTCAAGAAGAAGGAAAAGGAGAAGGAGAAAGAAAAAGAGAAAGAGAAAGAAAAGGAGAAAGAAAGGGAGAAAGAGAAGGAGAAAGAGAAAGAGAAGGAAAGAGAGAAGGAGAAAGAAAAAGAAAAGGAGAAAGAAAAGGAAAATCAAAAATCGATCCTTCTCGAAAAGGAGAAAGAGGAATCGGAAAGTTTGAGTGGACAGGAGAGTGATGTGAACGTCGAGGAGGAGGAATCTTCAAGTAGTGAGAATTCGAAGAAAGCGAGGTACAATTCTCTGAATAGAGGAAAGGCGAAGGAGGAAAAGAAACCTAAGGAGGAGAAGAAGAAAGTTCTCGAGAAGAAGAAAGTCGAGAAGAAACAGGAGAAAAAGGAGGAGAAAATCGAGAAGAAGGAGGAGGACACTACGAAGGTGAGAACAAAAGCAAAAGAAGAGGCGACGAAGGGAAAAACAGTGGTGGAAACACGAGAATCTAGAACTCCGTCCAGAGAAACGGAGAAAAAGGCGACTTTCTCGAAACAGAGACGTCTCACAGAGGAGGAAATGAAGAAAAGAGGACGTAAACGTAAAGACACTGACGGTGAGAAGAGTCGAAGTACCGAGGAGCCGATCGACTACGCCCCTTCGTACAAAGGACCCGTCGTCCTAGGCGATAAATTAAAAGTCTACTACGGCCCCAATCACGAGTCGAAAGTCACCTACGAGGCGAAGGTCATTGACGTCGAGGATGACGACACTGAACCCCTTTATCTCGTCCACTACACCGGTTGGAATACAAGATACGACGAGTGGATCAAAAGTTCCCGAATCGCCCAGAACTTCACCCAGAGTCAAGGCAGAGTCAAACGAACAAAAACCGTCTCCCGTCCTCCAACGCCAGGCTCCTCCGGAAATGGTAAATCGACAAAAGCCGTCACTCCCGTGTCCCAAACCCGAAGACGAGCGCAGAGTGTCGCTCCCACTCCAGGCACGCCGACAATGCTCAAGGAGTCGAAAGTCATCGACACCGACAAGGACGACGCCGAGTCGGACTACCTCGTCGACTACAGCGGCTGGAACACCGGATTCGACGATTTCTACAAAGGTCAAGGTCGCGTCAAGAGAAAAAAAGCCTTTCCCAGACCAGCGACTCCCGGACCGTCCGGCAATGGAAAGGCGGTGAAAAATCCCGTTACTCCCGTTTCACAGACACGAAGACGAGCGCAAAGTGTCGCACCATCGCCAGGAACGTCGTCAATGAGCAAAGAGGGAAAAAAAGAAGAAAAGGAACGATCGACTACGCCCGTCTTCGGTCCCGGCGCCAAGAGTCCAGCGACACCGGCCACTGGGAGATTGAGTCGAGCTACGCGAAACGCCGAGAGTGGCATTGAATTGCGACGACGAACGAGAAGAACTTCCGGTCACACTGACGTCACAGCTGCTTCCGAAAGTGAGGACACGGATTCTTACGAATCGGACGCGACCGAACCGGAGCAAAGGGCCGCCTCCAAGGAAAAGGAGGAAGGCACTCGACGCGAAGCGAAACGACGAGCGGAGACCAAAATAAAAATGGACGCCAGTGAAGGTGAGGACGAGAAGGAACCAATCGAAGAACCCAGACGAGGGCGTAGACTCCGTAGAAATTTGAACAAAATCGCCGAAGTTAAATCCGAACCCGAGAGCGATGAGGAACAACCAAAAGGTCGCGATTTCGATCTCAATCAAATTCGCTCCGAATTAAAGGGCTTCGACAAAGCTGTCAAGATGGAAATAATTCGTGTCGAACCCGAAGTCGAGGAGGACGTGAAACCACCCATCGAACCCGTTCTACCAAGTCCGGAAAAAATTGAAAAGCTGGAAAAAGAAAAACTCGAGAAATTAGAGAAACTAAAGCGAATCGAGGAGGAAAAATTAGAGAAACTGAAGCGAATCGAGGAGGAGAAACTCGAGAAACTAAAGCGAATTGAGGAGGAAAAAAAACTGAAGCGAATCGAGGAGGAAAAATTAGAGAAACTGAAGCGAATGGAGGAGGAAAAACTCGAGAAACTAAAGCGAGTCGAGGAGGAGAAACTCGAAAAGAAAAGAATCGAGGAGGAAAAGGAAAAGGAGAAGAAAAGAATCGAGGAAGAAAAGGAGAAGAAAAGAATCGAGGAGGAAAAGGAAAAGAAGGAAATAAAAATCGACAGTGAAACAAAATCCACAGAGAGTACAGAGGACATTTACGAATTCAAAGAACCCGAACCATTCGAATTCGAAGTGAGAAACAAATCCGGCGACAAGGATAAACTAAAGAGACGAGTATTCGACGACAATGTGAAAAGTAGTCCGAAGAAAAAGCAAAAAACCTCGCCATTGCCAAAGGAACCAAAAACCGACGATACAGAACGAAAGAAAATCATTCGAAAACCATTTATGAAGAAACTTGACGAACCACCGCCACCAGCAGAAGAGAATCTCTCCCGTCCCCTATTGCAATCATCCTGGAAATGTGAGGAGGCATTCGACAAACTCTGCAATGAGACATACAATCAAAAAACACCCATTGTCGACGAAACGAAAAATCTCGATCTACTTTTCAACGATCTACCCGGCGATGACGATTCCGCCATTGACGATCCCGAGGATCGTTTAATAATCTCCGAAACTGAGACCGAAGAGAATTTATTCTCCTACCAACAGGAAATATTCCCACCAAGTGAAATCGAGGAAAAAATTAAAACATCACCACCACCACCACCAACTCCACAATTACCCTCCATTCCAATTGTCGAGGCGAAATTGAATTTGATTTCAAAACCATCTTCGCCGAAAATCGAGATAAAAACCGATTTTCCCTCTATTGTTCCAATGCCAATAAGTGCGCGACTTCCCGTCACTTCGTCAATTGAGGAGAAATTATCCGCCGCCGCTGCTTTTCGGAACAAAACAAAAGATGCGAAAAAAGACGACACCGAGCAGGAGTCGTTAAAAAAATCAATCTTCAAAGAAAAGGAAAAGAAATCGGACTTGAATCGTCGGGTGAAAGAGGAGAAAATAAAAATCGAAAGCGAGAAGAAAGACCTCGAGAGGGTGAAAAAAGAAGATGATGAGGAGAAGACTATTCCATTGTCGAAAGTCAAGGAAGCAGTCAAGGAAATAGAGAGAAGAATCGAGAGTGAAGCCTCCCAGAAACTAGAGATAAAAAAATTCATCAAAACAGAGGAAAAGCAACAAGAGGAGAAATGGAAGGAGAAATTCCAGGAGGAGGAGCAAAAAACTCTGAATATTGAATTTACGGACTCTACCGATAGTAGTGATTCGGAAAAACGACTAATAATCGACAATGAAATTGATTTCAACGAAGAACCGAAATTCGAGGTGAAATTAACAAACGAACGCGGAGCGGTAAAAGGTTCCCTGGCCAAAATTCTCCCCGAGAGGACAATCATCAAGAATCCAAAGGAAAAAACCCCAACCGTCAAGAATCAAATAAAAAATCTGGAAATAAAGAATCAGAAAAGTCAAGTAATTAAATCTCTCAAGAGTGAAAAAATTAAGAATCCAATTTTAAAGAAGACGCAAGATTTAAAGATTGAGACAAAAGTAGAAAAGGAAGAAAAACAAATTGATAAGAATCAAATTACTAAGAATCCAGAAAGACCGATAATGATGAAGCAGCACGAGCGAGGTTTGAGTTTGAAATTAACTCAAGGAAAAGTAAATTTCGACAAAGGAGTGAGTCAAAAAATTGACATCATCGAGGATATAAAACTACCGCTGCAAAATCAAGTACTCCGTTTGCAGCAAGCGGGTCTTCAGTGTAAATTCATTCGAGTCGATGAGGAAGGCGAGAATTTAAATTCCCTCCTCTGCGAAGAGGAAATTCCCGGATCGCCAACACCGGGAATTGACGTCATTGATCACGAAGCCCCGGGTACTTCGCACACGACACCAAAAGCAAAGATCCCCGACAATTCCCTCGTTCTCATGGAAATGCCATTCGCAAGTGCACCAACGTCAAGTCCAACCTCTTGCGCCACAATATCAACATTAAGTATGTCCCTACCGCAAAATGCAGGTAGCAATCCCCTAATTTCGGTGCCAATGCAACAACCGATCCCAAGGCAGGAAATTCCTCGACAAGAGAGCAATGAAGCTGCACCGGTGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGTGAATCGCCGAGGGAAGAGGGTACGGCGGGTTCGAGTCCAATGAGTGGCGATGATAATAATTTGAAGCAGCATCGTGACAGTAGTGAAATGGAGAATGATGGGAAAATCGTGGGTTTGAGTGAGGATGATGGTTCGTTGATGAATCTCGAGGGACAGAGTGTGGAGAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACGGAATTGGGCAGTAATTCGGGGAAAAAATCGCCGAGACAATCGGGAAGAAGTGGAAGACATGGCGCTGGGAGTGATAGTGATGATACTAGCGAGGAATCGAATCAATGCAGTAGCGCTAATTCTATTCCGACGAATCATAGTAATGTCACATTGACGGAGTTGAATAGTTATTCGTCGAGGTCGCCCAGGCCAACGAAGTACAATTTCTTTGTCGAATTGAATCCTGAGTGGGATGGAAGTCAAAGAATAGCGGTTCTTCAACAAAAACTTTGTGAACTTCGGAAAACTTATAATGCAGTTAAAGTGGAATTGGCAACTATTGAGAGACGTCGAAAAAAGCTCAAAAGACGAGAACGAGAAGCAATCAAAGCAGCCAAAGCAGAAATGCAACAAGCCTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDEQIKGTLRVGASVEARHNDRKDFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGSHDSGTGGEEKEGLEVEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVKDDYLVRSFKDARYYTVPKKEATEFTKDLGNKVENSALKIAVEKALLFLEKNELPPHWDKDSLFGNSVSSGNSDSDGDIDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGEEDIDLYRLFRAVYKLGGYNRVTNQNQWKIITRRLSFSMQSNPATHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSVRKQRPGRSLIRDKDRNTPIPPQVKTEKEEEEKKVEEEKKEKREVKKEVEEVPKIVKKKEKEKEKEKEKEKEKEKEREKEKEKEKEKEREKEKEKEKEKEKENQKSILLEKEKEESESLSGQESDVNVEEEESSSSENSKKARYNSLNRGKAKEEKKPKEEKKKVLEKKKVEKKQEKKEEKIEKKEEDTTKVRTKAKEEATKGKTVVETRESRTPSRETEKKATFSKQRRLTEEEMKKRGRKRKDTDGEKSRSTEEPIDYAPSYKGPVVLGDKLKVYYGPNHESKVTYEAKVIDVEDDDTEPLYLVHYTGWNTRYDEWIKSSRIAQNFTQSQGRVKRTKTVSRPPTPGSSGNGKSTKAVTPVSQTRRRAQSVAPTPGTPTMLKESKVIDTDKDDAESDYLVDYSGWNTGFDDFYKGQGRVKRKKAFPRPATPGPSGNGKAVKNPVTPVSQTRRRAQSVAPSPGTSSMSKEGKKEEKERSTTPVFGPGAKSPATPATGRLSRATRNAESGIELRRRTRRTSGHTDVTAASESEDTDSYESDATEPEQRAASKEKEEGTRREAKRRAETKIKMDASEGEDEKEPIEEPRRGRRLRRNLNKIAEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKMEIIRVEPEVEEDVKPPIEPVLPSPEKIEKLEKEKLEKLEKLKRIEEEKLEKLKRIEEEKLEKLKRIEEEKKLKRIEEEKLEKLKRMEEEKLEKLKRVEEEKLEKKRIEEEKEKEKKRIEEEKEKKRIEEEKEKKEIKIDSETKSTESTEDIYEFKEPEPFEFEVRNKSGDKDKLKRRVFDDNVKSSPKKKQKTSPLPKEPKTDDTERKKIIRKPFMKKLDEPPPPAEENLSRPLLQSSWKCEEAFDKLCNETYNQKTPIVDETKNLDLLFNDLPGDDDSAIDDPEDRLIISETETEENLFSYQQEIFPPSEIEEKIKTSPPPPPTPQLPSIPIVEAKLNLISKPSSPKIEIKTDFPSIVPMPISARLPVTSSIEEKLSAAAAFRNKTKDAKKDDTEQESLKKSIFKEKEKKSDLNRRVKEEKIKIESEKKDLERVKKEDDEEKTIPLSKVKEAVKEIERRIESEASQKLEIKKFIKTEEKQQEEKWKEKFQEEEQKTLNIEFTDSTDSSDSEKRLIIDNEIDFNEEPKFEVKLTNERGAVKGSLAKILPERTIIKNPKEKTPTVKNQIKNLEIKNQKSQVIKSLKSEKIKNPILKKTQDLKIETKVEKEEKQIDKNQITKNPERPIMMKQHERGLSLKLTQGKVNFDKGVSQKIDIIEDIKLPLQNQVLRLQQAGLQCKFIRVDEEGENLNSLLCEEEIPGSPTPGIDVIDHEAPGTSHTTPKAKIPDNSLVLMEMPFASAPTSSPTSCATISTLSMSLPQNAGSNPLISVPMQQPIPRQEIPRQESNEAAPVXXXXXXXXXXXXXXXXCESPREEGTAGSSPMSGDDNNLKQHRDSSEMENDGKIVGLSEDDGSLMNLEGQSVERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELGSNSGKKSPRQSGRSGRHGAGSDSDDTSEESNQCSSANSIPTNHSNVTLTELNSYSSRSPRPTKYNFFVELNPEWDGSQRIAVLQQKLCELRKTYNAVKVELATIERRRKKLKRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00881015;
90% Identity
iTF_00882734;
80% Identity
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