Basic Information

Gene Symbol
ARID4B
Assembly
GCA_001855655.1
Location
JUFY01022620.1:23509-31662[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-27 4.6e-24 85.2 0.1 1 89 307 394 307 394 0.95

Sequence Information

Coding Sequence
ATGTTGGGAGACGATCCACCTTATCTATCCGTCGGAACGGAGGTTAGTGCCAAGTACAAGGGTGCTTTTTGCGAAGCAAAGATCAGAAAAGTCGTGAGATCGGTAAAATGTCGTGTAACCTACAAGCAAGGATTGGGTACTGCAACAGTCACGGATGAACAGATCAAGGGAACATTGCGAGTCGGTGCATCTGTGGAAGCGCGGCACAATGATCGAAAGGATTTCATTGAAGCTACAATAACGAAAATTCAAGATTGTAGCCAGTACACAGTTGTTTTTGATGATGGCGATATCACGACATTGAGAAGAACTGCTCTTTGTTTGAAAAGTGGACGGCATTTTGCGGAAAGTGAAACATTGGATCAGCTTCCCTTAACGCATCCTGAGCACTTTGGAAATCCCGTTATCGGCGGTAGACGAGGACGTCGGTCCCGACAGGCACAAGATGACAGCAGTGAGGATGAGGGAAGTCCTCCGCGAGGTTCACACGATTCCGGCACCGGTGGCGAAGAAAAAGAGGGTTTAGAAATTGAACCCGAAATAGGTCGTGTTGTCTGCGTGGAACTTGGTgacaagaaaaagaaggacAATTGGTTTCCTGGACTCGTTGTCGCGCCAACTGCACAAGACACAGTGAGAATTCGCGTCAAGGATGATTATCTCGTTCGATCATTCAAGGACGCGAGATATTATACTGTACCGAAAAAAGAGGCAACCGAATTTACAAAAGATTTAGGCAACAAAGTGGAGAATAGTGCATTAAAAGTTGCTGTTGAAAAAGCACTTTTATTTCTCGAGAAGAACGAATTACCTCCACATTGGGATAAAGATTCGCTCTTTGGAAATTCAGTTTCCAGTGGGAATAGCGATTCCGACGGTGACATTGATTCAGACAGTTCTGACGATGAGCCACGTGAGGAGAAGGATCATTTTGTTGCACAACTTTATAAATTCATGGACGATCGTGGTACGCCAATTAATAATTGTCCAATGATCGGTGAGGAGGATATTGATCTTTATCGATTATTCCGGGCTGTTTACAAATTAGGCGGTTACAATCGTGTCacaaatcaaaatcaatggaaaataataacacGTCGTTTAAGTTTCTCAATGCAAAGTAATCCAGCGACGCACAATCTTGTTAAGCAAGCgtacaagaaatttttgcaTTCCTTTGAGGATTTTTACAGGAAGCTTGGTTGCACAATGGTGAATCATCCACGTGGTAGTGTTAGAAAACAACGACCCGGACGTAGTTTAATACGCGATAAAGATAGGAATACGCCAATTCCGCCACAAGTTAAGACTGAAAAAGAGGAGGACGAGAAGAAAGTCGAGGAGGAGAAGAAGGAGATCAAGGTTAAGAAGGAAATCAAGGAAGAGGAATCACCGAAACCGGtcaagaagaaagaaaaggaaaaagagaaggaaaaagagaaggagaaagaaaaggaaaaagaaaaggaaaaagagaaggagaaagagaaagaaattcaGAAAGTCATTCTCGAAAAGGAGAAAGAAGAGTCGGAAAGTTTGAGTGGACATGAGAGTGATGTTAACGTCGAGGAGGAGGAATCATCAAGtagtgaaaattcgaaaaaagtaCGCTACAATTCTCTAAACAGGGGGAAAGTGAAGGAGGAAAAGAAGCCGAAAGAGGAGAAGAAGAAAGTCCtcgagaagaagaaaattgaaaagaaacaagagaaaaaggaggaaaagACCGAGAAGAAAGAAGAGGATACAACAAAAACGagaacaaaaacaaaagatgAGGCGACGAAAGGAAAGACTGTTGTTGAAACACGAGAATCGAGAACACCGTCTAGAGAAACGGAGAAGAAGTCCTTTACGAAGCAGAGACGTCTCACTGAggaggaaatgaaaaaaaggggaCGTAAACGTAAAGACACGGATGGTGAGAAAACTCGTTCTACAGAGGAACAATCTGTCGATTACGCACCATCTTACAAAGGACCCGTCGTCCTGGGCGATAAATTAAAAGTCTACTATGGACCCAATCACGAGTCGAAAGTCACTTACGAAGCAAAGGTCATTGACGTTGAGGATGACGATACGGAACCACTTTATCTCGTTCATTACACCGGTTGGAATACAAGATACGACGAATGGATCAAAAGTTCCCGAATCGCACAGAATTTCACTCAAAGTCAAGGAAGAGTGAAACGAACGAAGACTATTATTTCCCGTCCTCCAACGCCAGGCGCATCAGGTAATGGTAAATCGATAAAAACCGCCGTCACTCCGGTTTCACAGACACGAAGACGTGCACAGAGTGTTGCACCAACACCCGGCACGCCAACAATGCTGAAGGATTCAAAAGTCACTGACGGTGACAAAGATGACGCTGAGTCGGACTATTTGGTCGATTACAGCGGTTGGAATACCGGATACGATGAATATTTCAAGGGTCAGGGTCGAGTGAAGAGAAAAAAGGCTTTTCCACGACCAGCAACACCTGGACCATCGTCAGGTAATGGGAAAACGGTGAAAACTGCCGTGACACCAGTTTCACAGACACGAAGACGTGCACAAAGTGTCGCACCATCTCCAGGAACGTCGTCAATGACAAAAGATGGCAAGAAGGATGagaaggagaaagagagatcGACGACACCAGTTtttggtggtggtggtggtccGGGATTAAAGAGTCCAGCAACACCGGCCACTGGAAGATTGAGTCGAGCTACGCGCAATGCTGAGAGTGGAATTGAATTGAGACGACGCACGAGAAGAACATCCGGTCATACTGACGTGACGGCTGCGTCCGAGAGTGAGGACACGGATTCATATGAATCGGACGCAACTGAACCTGAACCAGAGCCAAGAGCAGCTTCCAAGGAGAAGGAGGAGGGCAATCGACGAGAAGCGAAACGACGAGCCGAGACAAAGATAAAAATGGACGCCAGTGAAGGTGAGGATGAGAAAGAACCCATTGAGGAGCCAAGACGAGGACGAAGACTCCGTagaaatttgaacaaaatcaCCGAAGTGAAATCCGAACCCGAGAGCGATGAGGAACAACCAAAGGGCCgtgattttgatttaaatcaaattcgcTCCGAACTAAAAGGCTTTGACAAGGCCgtcaaaatggaaataatgCGCGTAGAACCCGATCTCGAGGAGGACGTCACACCTCCAGAACTAGAAAAACCCCTTCCCCCTACTCCAGAGAAAATCGAGAAAGTCGAGAaattagagaaagaaaaaattgaaaaacaaaagagaatcgaggaagagaaaataaagaaaatcgaGGAGGAGAAACTCGAGAAGAAACGAATCGAGGAGGAGAAACTCGAAAAGAAACGAATCGaggaggaaaaagaaaagaaacggATCGAGGAGgagaaattagaaaagaaacgAATCGAGGAGGAAAAACtggagaaattaaagaaaatcgaAGAGgacaagaaagaaattaaaatcgaaattgaaacaaagacCATTGAGAATACAGAAGATATTTACGAATTCAAAGAACCAGAACCATTTGAATTCGAAGTGAGAAATAAATCCGGTGATAAGGATAAATTAAAGAGGCGAGTTTTTGACGAAGGTGTTAAAAGTAGTCCGAAGAAGAAGCAAAAGACATCGCCATTGCCAAAGGAAAAAACAGAAGATGCCGAAAGTCGTAAGAAGATCATTAGAAAGCCTTTCATGAAAAAACTCGATGAACCAGCACCGGAGGAAGTGAATCGAACAATGTTGCAATCATCCTGGAAATGTGAGGAGGCATTCGATAAACTTTGCGAAACATACAATCAACCGAAAACACCAATTGTTGATGAGACAAAAAATCTTGATCTCCTCTTCACTGATTTACCAGGCGATGACGATTCTGCGATTGACGATCCCGAGGATCGTTTAATAATCTCCGAAACCGAGACcgaggaaaatttattctcctACCAACAGGAAATCTTCCCCCCTGATGTTGAGCaagaaaaaccaaaaacaCCACCACCAACATCAACCATCATTGAATCCAAATTAATCATCACTCCTCCCATAATTCCAAAACCATTGTctccaaaaattgaaattaaacccGATTTTCCGTCTTCATTGCCATCGGCGTCAATTGTTCCAATTCCAATAAGTGCACGACTTCCTGTCACATCATCAATCGAAGAGAAATTATCAGCTGCGGCCGCTTTTAGAAACAAAAGCAAAGAATCAAAAAAGGATGATGATCAAGAATCGGGGAAAAAATCCACTCACTTTAAGGATAAAGAAATTTCACGTAAATCGGAAATCAATAGACGAATGAAAGAGGAGAAAATTAAGATTGAAGTTGATAAAAAGGAGGAAAGTAAGAAGAAACTGGAAGAAATGGATGTACCAGAAGAGAAAGTTGTTGTGTCAAAAGTAAAGGAAGCTGTGAAGGAAATTGAAAGACgaattgaaagtgaaaatgccGCGCAAAAATTGGATTTGAGAAAATTCACCGATTTGAAGAATCAAGAGAAAATTGACGACAAAtggaaaaaggagaaaatatttcaagatgaGGAGCAAAAATCgcttaatattgaatttaccGATTCAACGGATAGTAGTGATTCAGAGAGGCGATTAATCATTGACAATGAAATCGAATTCAATGAGGAGCCAAAATTTGAGGTGAAGATCAATCCCGAGAGGAGTGCAATCAAGGAACGTGGAATTGTCAAACCACCCCAGGAGAGAAGttcaattatcaaaaatcaAGCGAAAAGTGAAAAGAATCCGATCAAGAGTCAAGTCAAGAATCAAGAGCGACCAATTGTCAAGAGTCAGGAAATTAAAAGTCAAGGTAAAATGCAAGATCGAAGTGTGAAGAATTTACCTGTTGTGAAAAATCAAGAGAGAccgttattgaaaaatatgaaagcaCAAGAGTCGAGTACAAAAATCGTTGATGGAAAATTGGATCAAGAATTGAAGGAACAGGAGAAGAGTCAGGAGATGGTGAAGAATCAGGTATCGGTGGTTAAAAATCCAGAGAGACCGGTAATGATGAAGAATCACGAGCGAGGTTCCAGTTTGAAGTTAAATCAGGAACGAGGATcaacattgaaattaaattacgaGAAGGTGAGTCAAAAGTCGGTGGAATTGATCGATGATATAAAATTACCAATCCAAAATCAGGTATTACGTCTTCAACAGGCGGGTCTACAGTGTAAATTCATAAGAGCTGATGAAGAAGGCGAGAATTTGAATTCACTTCTTTGTGAGGAGGAAATACCCGGTTCGCCAACACCTGGAATCGATGTCATTGATCATGAGGTACCGGGAACTTCGCACACAACACCAAAGGCAAAAATCCCTGATAATTCGATTGTCCTGATGGAAATGCCATTTGCCAGTGCGCCGTCATCGAGTCCTACAACAACTTGCGGTACAATATCAACACTGAGCATGTCATTACCacaaaatagtaataattcgATAATTTCCGTGCCAATTGTTCAACAATTGCCAATAATACCAAGACAGGAGATTCCAATTCCAATTCAGAGACAAGAGAGCAATGAAGCGGCGCCAGTGATGGATAATACACCGCCAACGACACCTGATTCGAGTATATCGAATATGTGCGAATCGCCAAGAGAAGAGGGAACAGCGGGTTCGAGTCCAATGTCTGATGACAATCTAAAGCAACATCGTGACAGTTCTGAAATGGAGAACGAAGGGAAAATGGTGGGACTCAGTGAGGATGATGCTTCGTTGATGAATCTCGAGGGTCAAACAATTGAGCGACCATTGAAGCAGATAATGAAGAAAATCGACGAAACAACTGTGGTctcgaaaaaaaggaaacgcAATCGTAGTCAAACTGAATTGGGAAATAATTCGGGAAAAAAATCACCTAGACAAACAGGTAGAGGGAGACATGGTGCTGGAACTGACAGTGATGACACAAGTGAGGAGTCGAATCAATGCAGTAGCGGTAATTCCATTCCGACGAATCATAATGTCACATTAACGGAACTTAATAGTTACTCGTCAAGGTCGCCCAGGCCAACCAAGTACAATTTCTTTGTCGAATTAAACCCCGAGTGGGATGGAAGTCAAAGAATAGCCGTTCTTCAACAAAAACTTTGCGAACTACGAAAAACTTATAATGCAGTAAAAGTCGAATTGGCAACGATTGAAAGACGTCGGAAAAAGCTCAAAAGACGAGAACGAGaagcaattaaAGCAGCCAAAGCAGAAATGCAACAAGCCTGTTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVTDEQIKGTLRVGASVEARHNDRKDFIEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDDSSEDEGSPPRGSHDSGTGGEEKEGLEIEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVKDDYLVRSFKDARYYTVPKKEATEFTKDLGNKVENSALKVAVEKALLFLEKNELPPHWDKDSLFGNSVSSGNSDSDGDIDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGEEDIDLYRLFRAVYKLGGYNRVTNQNQWKIITRRLSFSMQSNPATHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSVRKQRPGRSLIRDKDRNTPIPPQVKTEKEEDEKKVEEEKKEIKVKKEIKEEESPKPVKKKEKEKEKEKEKEKEKEKEKEKEKEKEKEIQKVILEKEKEESESLSGHESDVNVEEEESSSSENSKKVRYNSLNRGKVKEEKKPKEEKKKVLEKKKIEKKQEKKEEKTEKKEEDTTKTRTKTKDEATKGKTVVETRESRTPSRETEKKSFTKQRRLTEEEMKKRGRKRKDTDGEKTRSTEEQSVDYAPSYKGPVVLGDKLKVYYGPNHESKVTYEAKVIDVEDDDTEPLYLVHYTGWNTRYDEWIKSSRIAQNFTQSQGRVKRTKTIISRPPTPGASGNGKSIKTAVTPVSQTRRRAQSVAPTPGTPTMLKDSKVTDGDKDDAESDYLVDYSGWNTGYDEYFKGQGRVKRKKAFPRPATPGPSSGNGKTVKTAVTPVSQTRRRAQSVAPSPGTSSMTKDGKKDEKEKERSTTPVFGGGGGPGLKSPATPATGRLSRATRNAESGIELRRRTRRTSGHTDVTAASESEDTDSYESDATEPEPEPRAASKEKEEGNRREAKRRAETKIKMDASEGEDEKEPIEEPRRGRRLRRNLNKITEVKSEPESDEEQPKGRDFDLNQIRSELKGFDKAVKMEIMRVEPDLEEDVTPPELEKPLPPTPEKIEKVEKLEKEKIEKQKRIEEEKIKKIEEEKLEKKRIEEEKLEKKRIEEEKEKKRIEEEKLEKKRIEEEKLEKLKKIEEDKKEIKIEIETKTIENTEDIYEFKEPEPFEFEVRNKSGDKDKLKRRVFDEGVKSSPKKKQKTSPLPKEKTEDAESRKKIIRKPFMKKLDEPAPEEVNRTMLQSSWKCEEAFDKLCETYNQPKTPIVDETKNLDLLFTDLPGDDDSAIDDPEDRLIISETETEENLFSYQQEIFPPDVEQEKPKTPPPTSTIIESKLIITPPIIPKPLSPKIEIKPDFPSSLPSASIVPIPISARLPVTSSIEEKLSAAAAFRNKSKESKKDDDQESGKKSTHFKDKEISRKSEINRRMKEEKIKIEVDKKEESKKKLEEMDVPEEKVVVSKVKEAVKEIERRIESENAAQKLDLRKFTDLKNQEKIDDKWKKEKIFQDEEQKSLNIEFTDSTDSSDSERRLIIDNEIEFNEEPKFEVKINPERSAIKERGIVKPPQERSSIIKNQAKSEKNPIKSQVKNQERPIVKSQEIKSQGKMQDRSVKNLPVVKNQERPLLKNMKAQESSTKIVDGKLDQELKEQEKSQEMVKNQVSVVKNPERPVMMKNHERGSSLKLNQERGSTLKLNYEKVSQKSVELIDDIKLPIQNQVLRLQQAGLQCKFIRADEEGENLNSLLCEEEIPGSPTPGIDVIDHEVPGTSHTTPKAKIPDNSIVLMEMPFASAPSSSPTTTCGTISTLSMSLPQNSNNSIISVPIVQQLPIIPRQEIPIPIQRQESNEAAPVMDNTPPTTPDSSISNMCESPREEGTAGSSPMSDDNLKQHRDSSEMENEGKMVGLSEDDASLMNLEGQTIERPLKQIMKKIDETTVVSKKRKRNRSQTELGNNSGKKSPRQTGRGRHGAGTDSDDTSEESNQCSSGNSIPTNHNVTLTELNSYSSRSPRPTKYNFFVELNPEWDGSQRIAVLQQKLCELRKTYNAVKVELATIERRRKKLKRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00881015;
90% Identity
-
80% Identity
-