Lcla017741.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- nfxl1
- Assembly
- GCA_001855655.1
- Location
- JUFY01033298.1:2348-7864[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 20 0.54 1.4e+04 -3.3 1.1 15 19 124 128 123 128 0.81 2 20 0.16 4.3e+03 -1.6 0.4 4 10 159 165 158 165 0.92 3 20 1.5e-08 0.00039 20.9 17.0 1 19 173 190 173 190 0.99 4 20 0.67 1.8e+04 -3.6 0.4 6 10 216 220 215 220 0.87 5 20 1.2e-06 0.031 14.8 16.8 4 19 229 244 227 244 0.93 6 20 0.00031 8.1 7.1 8.5 1 19 279 298 273 298 0.85 7 20 0.00023 6 7.5 9.5 1 18 334 351 334 352 0.97 8 20 0.019 4.9e+02 1.4 11.8 1 12 386 397 386 397 0.94 9 20 0.16 4.1e+03 -1.5 1.4 5 10 406 411 406 411 0.96 10 20 6.2e-08 0.0016 18.9 13.5 1 19 417 435 417 435 0.92 11 20 0.4 1e+04 -2.8 0.6 5 10 463 468 463 468 0.90 12 20 2.7e-05 0.71 10.5 7.2 9 19 483 493 481 493 0.90 13 20 0.00034 9 7.0 5.8 1 12 503 513 503 513 0.95 14 20 0.44 1.1e+04 -3.0 5.8 14 18 545 549 545 550 0.89 15 20 0.82 2.1e+04 -3.8 0.6 9 12 567 570 567 570 0.77 16 20 8.3e-05 2.2 8.9 7.2 1 12 586 597 580 597 0.91 17 20 0.78 2e+04 -3.8 1.7 6 10 634 638 634 638 0.93 18 20 5e-05 1.3 9.6 12.7 3 19 647 663 646 663 0.92 19 20 1.7e-06 0.046 14.3 8.3 1 16 708 722 708 728 0.86 20 20 0.37 9.7e+03 -2.7 0.4 5 10 757 762 757 762 0.92
Sequence Information
- Coding Sequence
- atgaagaaatttaaacGAGCTCAGGCGGAGAATCGGGCAGCAATTGAAAAGCATTTAGAAGCAAATGAGTTTCTTGATTCCTCGAGTGAGGAAGAGGAAAGCGGGAATAATTTAGACGAAGCTGTAGGCAAAGTTCTATCCTCATATCAAGTTGAAGGCGGGGACACAGAGAAAACTTTGTCCTATTTGAGCGAAGTTTTGCAGTCAGGAGGAGccatttgtttaatttgtaTCTCATCGGTCAAAAAGACAGACGcgatatggaattgttttgaatgttttaCATTTATGCATTTGCCGTGCATTCAGCATTGGATTCGTGACAGTTTAACTTACAAACGAGAGAAAGGAATCAATCCTCAGTGGGCTTGtCCAAAGTGCCGTGCGGaatacaaagaaaatgaaattccaACGAAGTATACTTGCTTTTGTGGAAAGTCAATTGATCCCCCATATCAACCGTGGTCGATACCACATTCCTGTGGCGAAGCATGTGGAAAATATCTTCAGCCAAATTGTGGACACAAATGTCTCCTTCTCTGTCATCCAGGACCATGTCCACCGTGTCCGAAGACTGTCACCGTCAAATGCTTTTGCGGCAAGCAACCAGCGCGTCCACGTCGATGCAACATGAAAGAATGGAGCTGCGCAAGTGTCTGCGCtaagaaatacaaattatgCCCACACAGTTGTCAGAAAGAATGTCACAAAGGCGATTGTCCACCATGTACTGAAATTGTCCTCGCATCATGCAACTGCCAATCCGAAAGTGAATCTCGTCCATGCAACGAATCCATTTGGTTTTGTGACAAGCCCTGTGGTCAACGATTCCCGTGCAATGTTCACTTTTGCGAAAGTCTCTGCCACAAAATTGGCGACTGTGCCGGATGTCCCGTTGAGAAAAATCGCACCTGCCCCTGCGGCAAGAAGAAGTACTCCGTCTCCTGTAAGCAGCAGCATGTTCCTACTTGTGGCGACACCTGCGGAAAACTTCTCAATTGTGGTGAACATTTTTGTAACATGAGATGCCACACGGAGAAATGTGGCCAATGTTTGGAAGTTGTGATGAAAACCTGTCGCTGCGgtagttttcaaaaagaaatcgCCTGTACAAAGGACTTTCACTGTAACAAAAAATGCAACCAATGGCGACTCTGCGGCCGACATCATTGTAACAAAAAATGCTGCGattgtctgattaaaaatacCTTCAACACTTGCGAGAAGATTTGCGACAATCAATTAAATTGCCAAAAGCACAAATGCGCCGCTCCCTGTCACAGTGGTCCCTGTTATCCATGCACGAGAATTGACGTGATTCAGTGCCGTTGTGGAAGCAGCAAAATCACCGTTCCCTGTGGATCCGTGAAGAGAATCAAACCGCCGAATTGTAATAAACTTTGCAAAATCCCACCGGTCTGTCATCATCCGAAACGCGAATCGCACAAATGTCACCGTGGCGCTTGTCCTCCTTGCAAGAAAGTTTGCGCCATTGTTCACAAAAGATGTGGACATTCATGTCCTGCAATTTGTCACACGAAGGTTTGGACGAAAGTCAAGATCAATGGAGATGCGCAACCAACTGCACCCTGGGACAATAATCGAAAGGAACATTGGAAATTGAAGACACTGCCTTGTCCTCCTTGTGAAGTCTCTGTTATGGTCACTTGTCTCGGGGGACATGAAACGTTACCCTGGCCTTGTCACAAGGCGATTCCTAGTTCATGTTTGAGGGAATGTGGAAGACTCCTGACATGTACGAATCATAATTGTGAGAAATTGTGTCACAAAGTGGATTTGGACAATGATGgtgataatgatgataaagCTGATAAAGATGATAAAGATGACAATGCTGATGATGATACTGATGCTACTAATGAAGAGAAGTGTATGATATGTGAAAAACCTTGCGTTTTTCCCAGACCGACAGGTTGTACTCATTCCTGTCTGAAAGTTTGCCACCCGGCTCCTTGTGCTCCATGTAAACAGCTGGTTCGAGTTGGATGCCATTGCGGTATTAATTTCCTGTACAAACGATGCACTGAACTCACGTCAGCAAATAAACAGCAGAAGGATGAAATTTTAAGATGCGGTAACCAGTGTCCAAAAAATtactcCTGTGGCCATCGTTGTGTGGATATTTGCCATTCTGGAGCCTGTTTAAAGGAGGATTCTTGCAACAAAAAAGTCAAGGTCTGGTGTAAGTGCAAAAGACTtaagaaagatttttcatgTATTCAAATTCGCAATGGCAACGGAGTCGTAAAGTGTGATGAtgtttgtcaaaaaataaaagacgaaTTAGAAAAAGCTAGGGAATTGGAAATTGCAAAGAAGAACAAGGAGGAGGAATTGCGAAATCAAAGAGAGATAGAAatgtttgaaaagaaatttaaaccaaaaagaaaaatgaaagatCGATCGCATCTAAACGATAAATCAAAGTCAGGCTCAAGAAAATGGACAAAATATTGGATTGTTGCATtgatatttctaattattgcATTTGCAATCACGTACTATTTtacacaaatttaa
- Protein Sequence
- MKKFKRAQAENRAAIEKHLEANEFLDSSSEEEESGNNLDEAVGKVLSSYQVEGGDTEKTLSYLSEVLQSGGAICLICISSVKKTDAIWNCFECFTFMHLPCIQHWIRDSLTYKREKGINPQWACPKCRAEYKENEIPTKYTCFCGKSIDPPYQPWSIPHSCGEACGKYLQPNCGHKCLLLCHPGPCPPCPKTVTVKCFCGKQPARPRRCNMKEWSCASVCAKKYKLCPHSCQKECHKGDCPPCTEIVLASCNCQSESESRPCNESIWFCDKPCGQRFPCNVHFCESLCHKIGDCAGCPVEKNRTCPCGKKKYSVSCKQQHVPTCGDTCGKLLNCGEHFCNMRCHTEKCGQCLEVVMKTCRCGSFQKEIACTKDFHCNKKCNQWRLCGRHHCNKKCCDCLIKNTFNTCEKICDNQLNCQKHKCAAPCHSGPCYPCTRIDVIQCRCGSSKITVPCGSVKRIKPPNCNKLCKIPPVCHHPKRESHKCHRGACPPCKKVCAIVHKRCGHSCPAICHTKVWTKVKINGDAQPTAPWDNNRKEHWKLKTLPCPPCEVSVMVTCLGGHETLPWPCHKAIPSSCLRECGRLLTCTNHNCEKLCHKVDLDNDGDNDDKADKDDKDDNADDDTDATNEEKCMICEKPCVFPRPTGCTHSCLKVCHPAPCAPCKQLVRVGCHCGINFLYKRCTELTSANKQQKDEILRCGNQCPKNYSCGHRCVDICHSGACLKEDSCNKKVKVWCKCKRLKKDFSCIQIRNGNGVVKCDDVCQKIKDELEKARELEIAKKNKEEELRNQREIEMFEKKFKPKRKMKDRSHLNDKSKSGSRKWTKYWIVALIFLIIAFAITYYFTQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00882640; iTF_00883472; iTF_00881686; iTF_00880151;
- 90% Identity
- iTF_00880151;
- 80% Identity
- -