Lsyp012476.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptopilina syphax
Gene Symbol
nfxl1
Assembly
GCA_032872505.1
Location
CM065470.1:47241075-47246405[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.53 2.5e+04 -3.2 1.1 15 19 124 128 123 128 0.81
2 20 0.16 7.5e+03 -1.6 0.4 4 10 159 165 158 165 0.92
3 20 1.5e-08 0.00069 20.9 17.0 1 19 173 190 173 190 0.99
4 20 0.86 4e+04 -3.9 1.5 6 12 216 222 215 222 0.78
5 20 5.9e-07 0.028 15.8 14.1 2 19 228 244 227 244 0.91
6 20 9.3e-05 4.4 8.8 8.9 1 19 279 298 273 298 0.88
7 20 0.00011 4.9 8.6 9.9 1 18 334 351 334 352 0.97
8 20 0.018 8.5e+02 1.4 11.8 1 12 386 397 386 397 0.94
9 20 0.099 4.6e+03 -0.9 1.8 5 10 406 411 406 411 0.96
10 20 6.1e-08 0.0028 18.9 13.5 1 19 417 435 417 435 0.92
11 20 0.39 1.8e+04 -2.8 0.6 5 10 463 468 463 468 0.90
12 20 2.7e-05 1.2 10.5 7.2 9 19 483 493 481 493 0.90
13 20 0.00034 16 7.0 5.8 1 12 503 513 503 513 0.95
14 20 0.43 2e+04 -2.9 5.8 14 18 545 549 545 550 0.89
15 20 0.8 3.7e+04 -3.8 0.6 9 12 567 570 567 570 0.77
16 20 8.2e-05 3.8 9.0 7.2 1 12 586 597 580 597 0.91
17 20 0.44 2.1e+04 -3.0 1.2 6 10 620 624 619 624 0.92
18 20 3.6e-05 1.7 10.1 12.9 3 19 633 649 632 649 0.92
19 20 9.9e-07 0.046 15.1 9.9 1 16 694 708 694 714 0.86
20 20 0.36 1.7e+04 -2.7 0.4 5 10 743 748 743 748 0.92

Sequence Information

Coding Sequence
atgaaaaaatttaaacgaGCTCAGGCTGAGAATCGGGCAGCAATTGAAAAGCATTTAGAATCAAATGAGTTTTTAGATTCCTCGAGTGAGGAAGAGGATAGCGGAAATGTCTTAGACGAAGCCGTAGGCAAAGTTTTATCCTCATATCAAGTTGAAGGTGGTGATACGGAAAAAACATTGTCTTATTTGAGCGAAGTTTTGCAGTCAGGAGGAGCCATTTGTTTAATCTGTATCTCATCAGTTAAAAAGACAGACgcgatATGGAATTGTTATGAATGTTTTACTTTCATGCATTTACCATGCATTCAGCATTGGATTCGTGATAGTTTAACTTATAAACGGGAGAAGGGAATCAATCCTCAGTGGGCTTGTCCAAAGTGCCGGACGGAGtacaaagaaaatgaaattccaACAAAGTATACATGCTTTTGTGGAAAGTCGATCGATCCTCCCTATCAACCATGGACGATTCCTCATTCCTGTGGTGAGGCATGTGGCAAGTACCTTCAGCCGAACTGTGGACACAAATGTCTACTTCTCTGCCATCCGGGACCTTGTCCACCGTGTCCAAAAACCGTCACTGTCAAGTGCTTTTGCGGTAAGCAACCAGCACGGCCTCGTCGATGCAACATGAAGGAATGGAGCTGTGGAAGCATCTGCTgtaagaaatataaattatgcgcTCACAGTTGTCAGAAAGATTGTCACAGAGGCGATTGTCCACCATGTACTGAAATTGTACTCGCTTCATGCAACTGCCAAGCTGAAAGTGAACCTCGACCCTGCAACGAATCTATCTGGTTTTGTGACAAGCCTTGTGGTCAACGATTCCCATGCAATGTCCACTTTTGCGAAAGTCTTTGTCACAAAGCTGGCGACTGTGCGGGATGTCCGGTTGAAAAGAATCGCACCTGTCCTTGTGGCAAGAAAAAGTACTCCGTCTCCTGTAAACAGCAGCAAGTTCCCACTTGTGGAGATACTTGCGGAAAACTTCTAGACTGTGGTCAACATTTTTGTAACATGAGATGTCACACTGAGAAATGTGGACAGTGTCTTGAAGTGGTGATGAAAACCTGTCGCTGTGGCAGTTACCAAAAGGAAATAGCCTGCACGAAGGACTTTCACTGCAACAAAAAATGCACCCAATGGAGACTCTGCGGTAGGCATCATTGCAACAAAAAATGTTGCGACTGCCTGATTAAGAATACATTCAACACTTGCGAGAAGGTTTGCGACAATCAATTAAACTGCCAGAAGCACAAATGCGCTGCGCCCTGTCACAGCGGTCCATGTTATCCTTGCACTAGAATTGATGTAATTCAATGCAGATGCGGAAGCAGCAAAATCACCGTTCCCTGTGGATCTGTCAAGAGAATCAAACCACCAAATTGCAACAAACTTTGTAAAATTCCACCAGTCTGCCATCATCCAAAACGCGAATCGCACAAATGTCACCGGGGCGCTTGTCCTCCTTGCAAGAAAATTTGCGGCCTCGTTGACAAAAGATGTGGACATTCCTGTCCTGCAATTTGTCACACGAAAGTTTGGACGAAAGTCAAGATTAATGGAGATGTGCAACCCACTGCCCCCTGGGATAATAATCGGAAGGAGCATTGGAAAATGAAGACACTGCCTTGTCCTCCCTGTGAAGTTTCTGTTATGGTCACTTGCCTTGGAGGTCATGAAACTTTACCCTGGCCTTGTCACAAGGCAATTCCCAGCTCATGTTTGAGGGAATGTGGAAGACTACTGACTTGTACAAATCATAATTGTGAGAAACTTTGTCATAAAGTGGAAGTGGACGAAAATGACGAAAACGATGACGATGATGTGACTAATGAAGATAAGTGTATGGTTTGTGAGAAACCTTGCGTCTTTCCTAGACCGAAGGGTTGTACTCATTCCTGCATGAAAGTTTGCCATCCGGCTCCCTGCAATCCTTGTAAGCAGCTGGTTCGAGTTGGATGTCATTGCGGTATTAATTTCCTCTATAAACGATGCACTGAACTCACTTCAGCGAATAAACAGCAGAAGGATGAAATATTGAGATGCGGTAACCAGTGTCCTAAAAATTACTCTTGTGGGCATCGTTGTGTAGATATTTGCCATTCTGGACCCTGTTTAAAGGAGGAATCCTGCAATAAAAAAGTCAAGGTCTGGTGTAAGTGTAAAAGGCTTAAGAAAGATTTTTCATGTATTCAAATTCGTAAAGGCAATGGAATCGTGAAGTGTGACGATGTTTGTCAGAAAATAAAAGATGAATTAGAGAAAGCTAGGGAATTAGAAATTGCGAAAAAGAATAAGGAGGAGGAACTGAAAAATCAAAGAGAAATAGAAatgtttgaaaagaaatttaaaccAAAACGAAAAATGAAAGATCGATCGCATCTTAACGATAAATCAAAGTCTGGCTCAAGAAATTGGACAAGATATGGGATTTTTGCTATGGTAGTCCTACTAATTGCATTTGCGATCAcgcactattttttaaaaatttaa
Protein Sequence
MKKFKRAQAENRAAIEKHLESNEFLDSSSEEEDSGNVLDEAVGKVLSSYQVEGGDTEKTLSYLSEVLQSGGAICLICISSVKKTDAIWNCYECFTFMHLPCIQHWIRDSLTYKREKGINPQWACPKCRTEYKENEIPTKYTCFCGKSIDPPYQPWTIPHSCGEACGKYLQPNCGHKCLLLCHPGPCPPCPKTVTVKCFCGKQPARPRRCNMKEWSCGSICCKKYKLCAHSCQKDCHRGDCPPCTEIVLASCNCQAESEPRPCNESIWFCDKPCGQRFPCNVHFCESLCHKAGDCAGCPVEKNRTCPCGKKKYSVSCKQQQVPTCGDTCGKLLDCGQHFCNMRCHTEKCGQCLEVVMKTCRCGSYQKEIACTKDFHCNKKCTQWRLCGRHHCNKKCCDCLIKNTFNTCEKVCDNQLNCQKHKCAAPCHSGPCYPCTRIDVIQCRCGSSKITVPCGSVKRIKPPNCNKLCKIPPVCHHPKRESHKCHRGACPPCKKICGLVDKRCGHSCPAICHTKVWTKVKINGDVQPTAPWDNNRKEHWKMKTLPCPPCEVSVMVTCLGGHETLPWPCHKAIPSSCLRECGRLLTCTNHNCEKLCHKVEVDENDENDDDDVTNEDKCMVCEKPCVFPRPKGCTHSCMKVCHPAPCNPCKQLVRVGCHCGINFLYKRCTELTSANKQQKDEILRCGNQCPKNYSCGHRCVDICHSGPCLKEESCNKKVKVWCKCKRLKKDFSCIQIRKGNGIVKCDDVCQKIKDELEKARELEIAKKNKEEELKNQREIEMFEKKFKPKRKMKDRSHLNDKSKSGSRNWTRYGIFAMVVLLIAFAITHYFLKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00880918;
90% Identity
iTF_00882640;
80% Identity
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