Ldro000299.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Leptopilina drosophilae
Gene Symbol
nfxl1
Assembly
GCA_032873175.1
Location
CM065478.1:5982602-5988076[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.53 2.5e+04 -3.2 1.1 15 19 124 128 123 128 0.81
2 19 0.24 1.1e+04 -2.2 0.7 4 10 159 165 159 165 0.92
3 19 1.5e-08 0.00068 20.9 17.0 1 19 173 190 173 190 0.99
4 19 1.2e-06 0.054 14.8 14.6 3 19 228 244 220 244 0.88
5 19 0.0001 4.8 8.6 8.9 1 19 279 298 273 298 0.88
6 19 0.00011 4.9 8.6 9.9 1 18 334 351 334 352 0.97
7 19 0.018 8.5e+02 1.4 11.8 1 12 386 397 386 397 0.94
8 19 0.15 7.1e+03 -1.5 1.4 5 10 406 411 406 411 0.96
9 19 6.1e-08 0.0028 18.9 13.5 1 19 417 435 417 435 0.92
10 19 0.39 1.8e+04 -2.8 0.6 5 10 463 468 463 468 0.90
11 19 2.7e-05 1.2 10.5 7.2 9 19 483 493 481 493 0.90
12 19 0.00034 16 7.0 5.8 1 12 503 513 503 513 0.95
13 19 0.43 2e+04 -2.9 5.8 14 18 545 549 545 550 0.89
14 19 0.8 3.7e+04 -3.8 0.6 9 12 567 570 567 570 0.77
15 19 9.7e-05 4.5 8.7 6.4 1 12 586 597 580 597 0.91
16 19 0.44 2e+04 -3.0 1.2 6 10 620 624 619 624 0.92
17 19 5.5e-05 2.5 9.5 14.3 3 19 633 649 632 649 0.92
18 19 3.1e-06 0.14 13.5 9.1 1 16 694 708 694 714 0.86
19 19 0.36 1.7e+04 -2.7 0.4 5 10 743 748 743 748 0.92

Sequence Information

Coding Sequence
atgaaaaaatttaaacgtgCTCAGGCTGAGAATCGAGCAGCAATTGAAAAGCATTTAGAATCAAAGGAGTTTTTAGATTCCTCGAGTGAGGAAGAAGATGGCGGTAATGCTTTAGACGAAGCTGTAGGCAAAGTTTTATCCTCATATCAAGTTGAAGGTGGTGATACGGAGAAAACTTTGTCTTATTTGAGCGAAGTTCTGCAATCAGGAGGAGCCATTTGTTTAATTTGTATCTCATCAGTTAAAAAGACAGACGcgatATGGAATTGTTATGaatgttttacttttatgcATTTACCATGCATTCAGCACTGGATTCGAGATAGTTTGACTTATAAGCGGGAGAAGGGAATCAATCCTCAGTGGGCTTGTCCAAAGTGCCGAACGGAGtacaaagaaaatgaaattccaACAAAGTATACATGCTTTTGTGGAAAGTCGATCGATCCTCCCTATCAACCATGGTCGATTCCTCATTCCTGTGGCGAGTCATGTGGCAAGTACCTTCAGCCGAACTGTGGACACAAATGTCTCCTTCTCTGCCATCCGGGACCTTGTCCACCATGTCCAAAAACCGTTACTGTCAAGTGCTTTTGCGGTAAGCAACCAGCACGGCCACGTCGCTGCAACATGAAGGAATGGAGCTGTGGAAGCATCTGTGGTAAGAAGTACAAATCATGCGCTCACAGTTGTCAGAAAGATTGTCACAGAGGCGAGTGTCCGCCATGCACTGAAATTGTACTCGCTTCATGCAACTGCCAAGCTGAAAGTGAATCTCGACTTTGCAACGAATCCATCTGGTTTTGTGACAAGCCTTGCGGTCAACGATTCCCATGCAATGTCCACTTTTGCGAAAGTCTTTGTCACAAAGTTGGCGACTGCGCGGGATGTCCCATTGAAAAAAATCGCACCTGTCCTTGTGGCAAGAAAAAATACTCCGTCTCCTGTAAGCAGCAGCAAGTACCCACTTGTGGTGACACTTGCGGAAAACTTCTGGACTGTGGTCAACATTTTTGTAACATGCGATGCCACACTGAGAAATGTGGACAGTGTCTGGAAGTGGTGATGAAAACATGTCGCTGTGGCAGTTATCAAAAGGAAATAGCCTGCACGAAGGATTTTCACTGCAACAAAAAGTGCACCCAATGGAGACTTTGCGGTAGGCATCATTGCAACAAAAAGTGTTGCGACTGCCTGATTAAGAATACATTCAACACTTGTGAGAAGATTTGTGACAATCAATTAAACTGCCAGAAGCACAAATGCGCCGCGCCCTGTCACAGCGGTCCATGTTATCCTTGCACTAGAATTGACGTGATTCAGTGCCGATGCGGAAGCAGCAAAATCACCGTTCCCTGCGGAACTGTCAAGAGAATCAAACCACCAAATTGCAACAAACTTTGTAAAATCCCGCCAGTCTGTCATCATCCAAAACGCGAATCGCACAAATGCCACCGAGGCGCTTGTCCACCTTGCAAGAAAATTTGCGGCCTCGTTGACAAAAGATGTGGACATTCCTGTCCGGCAATTTGTCACACGAAAGTTTGGACCAAAGTCAAGATTAATGGAGATGTGCAACCCACCGCTCCCTGGGACAATAATCGGAAGGAGCATTGGAAAATGAAGACACTGCCTTGTCCTCCTTGCGAAGTTTCCGTCATGGTCACTTGCCTCGGGGGTCATGAAACTTTACCCTGGCCTTGTCATAAGGCAATTCCCAGCTCATGCTTGAGGGAATGCGGAAGACTACTGACCTGCACAAATCATTACTGTGAGAAACTTTGTCATAAAGTGGATGTTGACGAAAATGAAGAAAACGATGACGATGATGTGACTGATGAAGATAAATGTATGGTATGTGAGAAACCTTGCGCCTTTCCTAGACCAAAGGGTTGCACTCATTCCTGCACAAAAGTTTGTCATCCGGCTCCCTGCAATCCTTGTAAGCAGCTGGTTAGAGTTGGATGTCATTGTGGTATTAATTTCCTCTACAAACGATGCACTGAACTCACGTCAGCGAATAAACAGCAGAAGGATGAAATTTTGAGATGTGGTAATCAGTGTCCTAAAAATtacTCCTGTGGACACCGTTGTGTTGATATTTGCCATTCTGGATCCTGCTTGAAGGAGGAATCCTGCAATAAAAAGGTCAAGGTCTGGTGTAAGTGTAAAAGGctcaaaaaagatttttcatgcATTCAAATTCGTAAAGGCAATGGAATCGTGAAGTGCGACGATGTTTGTCAGAAAATAAAAGATGAATTAGAGAAAGCTAGGGAATtggaaattgcaaaaaagaataAGGAGGAGGAACTGAAAAATCAAAGAGAAATCGAAATGTTCGAAAAGAAATTTAAGCCAAAACGAAAAATGAAGGACCGATCGCATCAAAACGATAAGTCAAAGTCTGGCTCTAGAAATTGGAGAAAATATTGGATCTTTGCTTTGCTGTTTCTAATTATTGCATTTGCGATCACGCActactttatgaaaatttaa
Protein Sequence
MKKFKRAQAENRAAIEKHLESKEFLDSSSEEEDGGNALDEAVGKVLSSYQVEGGDTEKTLSYLSEVLQSGGAICLICISSVKKTDAIWNCYECFTFMHLPCIQHWIRDSLTYKREKGINPQWACPKCRTEYKENEIPTKYTCFCGKSIDPPYQPWSIPHSCGESCGKYLQPNCGHKCLLLCHPGPCPPCPKTVTVKCFCGKQPARPRRCNMKEWSCGSICGKKYKSCAHSCQKDCHRGECPPCTEIVLASCNCQAESESRLCNESIWFCDKPCGQRFPCNVHFCESLCHKVGDCAGCPIEKNRTCPCGKKKYSVSCKQQQVPTCGDTCGKLLDCGQHFCNMRCHTEKCGQCLEVVMKTCRCGSYQKEIACTKDFHCNKKCTQWRLCGRHHCNKKCCDCLIKNTFNTCEKICDNQLNCQKHKCAAPCHSGPCYPCTRIDVIQCRCGSSKITVPCGTVKRIKPPNCNKLCKIPPVCHHPKRESHKCHRGACPPCKKICGLVDKRCGHSCPAICHTKVWTKVKINGDVQPTAPWDNNRKEHWKMKTLPCPPCEVSVMVTCLGGHETLPWPCHKAIPSSCLRECGRLLTCTNHYCEKLCHKVDVDENEENDDDDVTDEDKCMVCEKPCAFPRPKGCTHSCTKVCHPAPCNPCKQLVRVGCHCGINFLYKRCTELTSANKQQKDEILRCGNQCPKNYSCGHRCVDICHSGSCLKEESCNKKVKVWCKCKRLKKDFSCIQIRKGNGIVKCDDVCQKIKDELEKARELEIAKKNKEEELKNQREIEMFEKKFKPKRKMKDRSHQNDKSKSGSRNWRKYWIFALLFLIIAFAITHYFMKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00880918;
90% Identity
iTF_00882640;
80% Identity
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