Lcla017799.1
Basic Information
- Insect
- Leptopilina clavipes
- Gene Symbol
- lrrfip2
- Assembly
- GCA_001855655.1
- Location
- JUFY01015130.1:124465-127943[+]
Transcription Factor Domain
- TF Family
- LRRFIP
- Domain
- LRRFIP domain
- PFAM
- PF09738
- TF Group
- Unclassified Structure
- Description
- LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.8e-114 7.3e-110 367.5 32.1 1 300 29 327 29 327 0.96 2 3 0.0028 73 3.0 2.8 122 171 327 376 325 380 0.92 3 3 0.0098 2.6e+02 1.2 0.2 209 239 373 402 370 402 0.84
Sequence Information
- Coding Sequence
- atggagTCATCTGTAGCTGGACGAAGACGAACTGCTACAAGACATTCTGCTGAAGATCAAGCTTTAGATCAAATTGCCAAAGAGgCGGAAGCGAGATTAGCAGCTAGACGTCAAGCAAGAGCCGAAGCTAGAGAAATTCGAATGCGTGAATTAGAGAGACAGCAAAAGGAAGCTGAGGAAAACGCAGATCGTGTGTACGACATGTGTACAgCTGACAGTAATCGTGCGATAAGAGTTACACCAGATCCAATCAGAACGTCTCGTCTACTtgcaaattcaaataattttcaatctaGTCGAAGATCATCTGAAGATTCATTAGAAGATGCTGGCCTTGGCAGAGATCCCAGGgTGGAACTGAAAGAGTTTGaggaaaaatttcgaaaagcAATGATTGCCAATGCACAATTGGACAATGAGAAATCGTCTTATGCTTATCAAGTGGATTTATTGAAAGATAAATTAGAGGAATTAGAAGAGACAGTTTCCCAATTGCGAAGAGAATTGAGAGAAAAGAATCGTGACGCTGAACATTTAAAACGCGTTAGTCAAAGGTTGAAGGAAGATTTAGATTTATGTAGAGCTCAATTAATAGAAAGAGATACATTAATTCAGGAAAATGGTTTAGTAATAGTAGAAGATGAAGGAAGTGACAATGAAGAAGTGGAGGGAGAAAATGGTCTTCGTTCAAGAAAAAGAGTTTTAGTTAGTACAGAAGCTGCCGAAGTATTGCAGAATGCTGGAGAAGGTTCTTTAGATGTCCGGTTAAGAAAATTTGCGTCAGAGAAAAAGGAATTACAGGATGAAATTCGACACTTAAGGTTAGAAGTTGAAGAAGCACGAAATCGTATGAGGCCTGAGAGAACTACCGGTTTGATGTtagGTGGATTTTCCGATTCAGAAGATATTCAACGTGAAGCGAATAAATTGATTGCtgactataaatttaaattacaaaaagccGAACAAGATATGTCGACATTACAGGCGACAGTGGCCAGGCTAGAGAGTCAAGTGATTCGTTATAAATCAGCCGCTGAAGCATCAGAGAAAGCCGAAGACGAATTAAAAgtggaaaagagaaaattacaaaGAGAATTCAGAGAGTCTCAAGGACGTGTCGAAGAACTGGAAACTGCCAATACCCATTTGCAACGAAGATTAGATAAGTTGAAAAATGCAAGGTCTACTCTTTTAAAGGAAATTTGA
- Protein Sequence
- MESSVAGRRRTATRHSAEDQALDQIAKEAEARLAARRQARAEAREIRMRELERQQKEAEENADRVYDMCTADSNRAIRVTPDPIRTSRLLANSNNFQSSRRSSEDSLEDAGLGRDPRVELKEFEEKFRKAMIANAQLDNEKSSYAYQVDLLKDKLEELEETVSQLRRELREKNRDAEHLKRVSQRLKEDLDLCRAQLIERDTLIQENGLVIVEDEGSDNEEVEGENGLRSRKRVLVSTEAAEVLQNAGEGSLDVRLRKFASEKKELQDEIRHLRLEVEEARNRMRPERTTGLMLGGFSDSEDIQREANKLIADYKFKLQKAEQDMSTLQATVARLESQVIRYKSAAEASEKAEDELKVEKRKLQREFRESQGRVEELETANTHLQRRLDKLKNARSTLLKEI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00305050;
- 90% Identity
- iTF_00460519;
- 80% Identity
- -