Basic Information

Insect: Leptopilina boulardi
Gene Symbol: -
Assembly: GCA_011634795.1
Location: PHTE01000401.1:92009-98891[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0004 0.043 14.7 4.1 1 23 224 246 224 246 0.97

2 11 1.2e-05 0.0013 19.4 1.5 1 23 252 274 252 274 0.98

3 11 0.00094 0.1 13.5 3.8 1 23 280 303 280 303 0.95

4 11 0.012 1.3 10.0 5.2 1 21 309 329 309 331 0.95

5 11 0.00012 0.013 16.3 1.9 1 23 337 359 337 359 0.99

6 11 1.5e-05 0.0016 19.2 0.4 1 23 365 387 365 387 0.98

7 11 0.00032 0.034 15.0 1.4 1 23 395 418 395 418 0.97

8 11 3.4e-05 0.0037 18.1 2.6 2 23 425 446 424 446 0.97

9 11 0.00012 0.013 16.3 0.3 1 23 452 474 452 474 0.99

10 11 0.0028 0.3 12.0 7.1 1 19 480 498 480 503 0.91

11 11 1.4e-07 1.5e-05 25.6 1.2 1 23 517 539 517 539 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0004	0.043	14.7	4.1	1	23	224	246	224	246	0.97
2	11	1.2e-05	0.0013	19.4	1.5	1	23	252	274	252	274	0.98
3	11	0.00094	0.1	13.5	3.8	1	23	280	303	280	303	0.95
4	11	0.012	1.3	10.0	5.2	1	21	309	329	309	331	0.95
5	11	0.00012	0.013	16.3	1.9	1	23	337	359	337	359	0.99
6	11	1.5e-05	0.0016	19.2	0.4	1	23	365	387	365	387	0.98
7	11	0.00032	0.034	15.0	1.4	1	23	395	418	395	418	0.97
8	11	3.4e-05	0.0037	18.1	2.6	2	23	425	446	424	446	0.97
9	11	0.00012	0.013	16.3	0.3	1	23	452	474	452	474	0.99
10	11	0.0028	0.3	12.0	7.1	1	19	480	498	480	503	0.91
11	11	1.4e-07	1.5e-05	25.6	1.2	1	23	517	539	517	539	0.98

Sequence Information

Coding Sequence: ATGACAACTAACGTGACTACTATAAAATTAGAGGGTAATCAGGAAACCGTAACGGAAATACAAACATACCTGGAAACCTTCAACAAGGAAATAGAAGGAGGACAGGGTGAACAATTTCAACATGTTCAGCtacAACAAGTTGAAGGTCTTTCTGGTGGCGAAGAAGGTGGAACATATTTTGTCGATCAATCAggacaatattattatcaagCAAGCGGTGATGACACACCTGTAATGACCCAAGTTCAAATACAAGAAGTTGATGACACAGAAGGACAAACTGAAGGCGACACTGCAGCTGATGAACAATATCAAGAACTTGAAGAATTAGAGCAAGTCGATGgggaaaatgaACAAGCTGTTAATGCAACGAATAATCAAGTTGTATTGAATTCCAATGATGCATATCAAACAGTAACAATTGTTCCATCGGACACTAATCCTGGTGAAGTGAGTTATGTTCTTATAGTGCAACAACCTGAGAATGAAGAGAAACCAAAACGTGACAATGAAGCAGGTGAAGAGGAAGGTGATGGTGAACAGGATCTCACTGTTTATGATTTTGAAGATAATGAGGACAATGATCCCACCGTTGAATCAGAAACCGAGGatgataaaactaaaattattaaatacattcCCAGAAAGTCACAAACTGTTACTCAAGCGCATATGTGTAATTATTGCAACTACACAAGTCCTAAGagATATCTTTTATCTCGACATATGAAATCTCATTCAGAGGAAAGGCCACATAAATGTAGTGTGTGCGAAAGAGGTTTCAAGACTTTGGCATCACTTCAAAATCATGTTAATACACATACCGGGACCAAACCGCATCATTGCAAATTTTGCGACAGTGCATTTACTACATCGGGTGAACTTGTAAGACATGTTCGGTACAGACACACTCATGAAAAGCCGCACAAATGTCACGAGTGTGATTATGCTTCTGTTGAACTGTCGAAACTCAAGCGACACATTCGTTGTCATACTGGAGAACGACCTTATCagTGTCCACATTGTACTTACGCGAGTCCTGATACTTTCAAATTGAAGCGACATTTACGAATTCACACTGGTGAGAAACCTTACGAGTGCGATATTTGTCAAGCAAGATTCACACAATCTAATAGTTTAAAGGCTCACAAATTGGTTCATAATgtTGGAGACAAGCCGGTTTTTCAATGTGAACTTTGTCCGACAACGTGTGGACGTAAAACGGATCTTCGTATTCACGTGCAAAAATTACACACTTCAGACAAACCATTAAAATGTAAACGCTGTGGAAAAACATTCCCTGACAGGTATAGTTACAAGCTTCATAGCAAAACTCATGAAGGCGAGAAGTGCTATAAATGTGATCTTTGTCCTTATGCATCAATATCAGCGCGTCATTTGGAGAGCCATATGCTTATTCATACAGATCAAAAGCCATATCAATGCGATCATTGTTATCAGTCATTCAGGCAAAAGCAATTATTGAAACGACATTGCAATTTATATCATAATCCATCTTATATTCCACCGCCACCACAGGAAAAAACGCATCAGTGCCCAGAATGCGAGAGACCATTcagacaTAAAGGTAATCTTATTCGCCATATGGCTGTGCATGATCCAGAGTCATCATTGCAAGAGAAACAACAAGCTTTGAAAATGGGAAggcaaaagaaaattcaaattattgatgGTCAACGAGTTGAAGTCATGACAGgtgATTTAGCTTCTAAATTAAGCTATGATGAcgatgaagaagaagaggaagaagaagaagaggaggaggaggaagaAGAGATGGGTGATGATGAAATGATGGCCGTTGAAGGAACTGACGGTCAACAATACGTTGTTCTGGAAGTTATTCAACTTGCTGATAATCAAGGATCCGATcagcaaATGGCTGTTGTGGCTAATGAGGATGGAGATATAGTGATGGAGGATCCTTTGGGTCAAGAAAATACCATTGTCGCCGATGTCTCTGGCGAACTTGAAGAAgatgatgaagaagaagagggAGACACTtcgttagaaaatttaaaattacgaaCTCAAATCACGAGAAACAAATCTGAGTCACAGTCTTCGCAACATGATCCTAAATTGCGTAAAGACATGGAAAATTGTTTTGGTTTTGATGAggaggaagaagaagatgagGATGAAGACAGCAGTGAGATGCGGTTGTTAGGGACCATATCGTAA
Protein Sequence: MTTNVTTIKLEGNQETVTEIQTYLETFNKEIEGGQGEQFQHVQLQQVEGLSGGEEGGTYFVDQSGQYYYQASGDDTPVMTQVQIQEVDDTEGQTEGDTAADEQYQELEELEQVDGENEQAVNATNNQVVLNSNDAYQTVTIVPSDTNPGEVSYVLIVQQPENEEKPKRDNEAGEEEGDGEQDLTVYDFEDNEDNDPTVESETEDDKTKIIKYIPRKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELVRHVRYRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICQARFTQSNSLKAHKLVHNVGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKTFPDRYSYKLHSKTHEGEKCYKCDLCPYASISARHLESHMLIHTDQKPYQCDHCYQSFRQKQLLKRHCNLYHNPSYIPPPPQEKTHQCPECERPFRHKGNLIRHMAVHDPESSLQEKQQALKMGRQKKIQIIDGQRVEVMTGDLASKLSYDDDEEEEEEEEEEEEEEEMGDDEMMAVEGTDGQQYVVLEVIQLADNQGSDQQMAVVANEDGDIVMEDPLGQENTIVADVSGELEEDDEEEEGDTSLENLKLRTQITRNKSESQSSQHDPKLRKDMENCFGFDEEEEEDEDEDSSEMRLLGTIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01048414;
90% Identity: iTF_00883259;
80% Identity: -