Basic Information

Insect: Lepidotrigona ventralis
Gene Symbol: stc
Assembly: GCA_002806875.1
Location: NIPQ01090252.1:3898-9747[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 3 2.6e+04 -4.4 1.6 15 19 577 581 576 581 0.81

2 15 0.13 1.1e+03 0.3 0.4 4 10 610 616 609 616 0.95

3 15 4e-05 0.35 11.5 14.9 4 19 627 642 625 642 0.93

4 15 7.3e-08 0.00064 20.2 12.3 1 18 678 695 678 696 0.97

5 15 3 2.6e+04 -4.4 1.9 7 13 700 706 700 707 0.75

6 15 7.7e-09 6.8e-05 23.3 13.1 1 19 734 752 734 752 0.98

7 15 5.2e-05 0.46 11.1 10.7 4 18 799 813 792 814 0.87

8 15 2.4 2.2e+04 -3.8 2.0 5 10 842 847 842 847 0.93

9 15 0.011 1e+02 3.6 9.1 1 11 853 863 853 864 0.96

10 15 0.82 7.2e+03 -2.3 0.6 4 10 868 874 867 874 0.89

11 15 6e-09 5.3e-05 23.7 13.9 1 19 880 898 880 898 0.98

12 15 0.94 8.3e+03 -2.5 0.7 5 10 926 931 926 932 0.88

13 15 3 2.6e+04 -6.3 10.6 10 19 945 955 934 955 0.76

14 15 7.5e-07 0.0066 17.0 13.5 1 16 991 1006 991 1017 0.85

15 15 1.2e-05 0.11 13.1 13.6 1 19 1023 1042 1023 1042 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	3	2.6e+04	-4.4	1.6	15	19	577	581	576	581	0.81
2	15	0.13	1.1e+03	0.3	0.4	4	10	610	616	609	616	0.95
3	15	4e-05	0.35	11.5	14.9	4	19	627	642	625	642	0.93
4	15	7.3e-08	0.00064	20.2	12.3	1	18	678	695	678	696	0.97
5	15	3	2.6e+04	-4.4	1.9	7	13	700	706	700	707	0.75
6	15	7.7e-09	6.8e-05	23.3	13.1	1	19	734	752	734	752	0.98
7	15	5.2e-05	0.46	11.1	10.7	4	18	799	813	792	814	0.87
8	15	2.4	2.2e+04	-3.8	2.0	5	10	842	847	842	847	0.93
9	15	0.011	1e+02	3.6	9.1	1	11	853	863	853	864	0.96
10	15	0.82	7.2e+03	-2.3	0.6	4	10	868	874	867	874	0.89
11	15	6e-09	5.3e-05	23.7	13.9	1	19	880	898	880	898	0.98
12	15	0.94	8.3e+03	-2.5	0.7	5	10	926	931	926	932	0.88
13	15	3	2.6e+04	-6.3	10.6	10	19	945	955	934	955	0.76
14	15	7.5e-07	0.0066	17.0	13.5	1	16	991	1006	991	1017	0.85
15	15	1.2e-05	0.11	13.1	13.6	1	19	1023	1042	1023	1042	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTCATTTGGGACCGGATGACGAAGACTATTACCAAATGTATGCTGATCAGAATGCACCCGGGCCTGCGTCAAGAAACTGGGCATTGTTCTCTGATAATATGAgtcataattatttacaaccTAAACACGAGttctatgtacaaaatgaaCGCATGTTTGAACAGAATAGACCAAGTACCTTCTATCATTCGAACGTGAATGTTATGCCAAACTTGATGGCCACGACTGCTAGCTATGAGTATGTAACTAATCCAATGAATACGCATGCATTAAATAGTCACGAGTACTATCCGCATGTTGTCAAACCTGAACAATGCTATTTGTCTGATGTCCCTTGGAATTGCGATAATGACCTGGCAGATAGAGACAAGTATGATCGTacgaaaagaatgaaagaaccTTTGGACAATATAACGAGTCACTCACAATTACACGTTATGGCTGAGGAGTTTGTGCCAAATAATAGAGAATACGATGATAGGAGCAAAAATAACGAATTGcagaatgtaaaatgtattaacGATACAAATTCTTGTGCCCAGGACAGTAACAAGATATCGGGTAAATATTTTGCTTACAACACGAATAGGcatgataaaaaatacaatagcAAAAAGAGTCCCAATGGTAAACACAAAGAAAGACAATGTTACAAAGAAGACCAGTGTTACAAGAAGTGTGCGTATGCAAATTACTGTCAGCAACATGTCAAAGCTCATAAGCTTCAAGGTAATAAGTACTTTATTAATAAGCATTATTCAGGAAACTCTCAAGTAAAATCAAAGTATACAAATGAGAATGCATCAGATGAACGTCCAACGAATAATGATGTTGCTTGTAGTAGTAAAGAAGATTGTGCAACAAATTCGAATAATGGAGAATCGTCTTcaaatgtaaaaacaatttcaaatagaaataaaaatttatcgagtaaGAATAGTAATGAAAGAATTGTTATTGGCGATAATAACGTGCAGGATAATAACGTGCAGGATAGTAGTAATGTACAGGATAATAACGTACAGGAATCCAATAATCTAGTTAAAGAGTTTACTTACTATAACTCTGGATTAAAACAGACCTACAATAATCATAGAAATGTAAGGAGATATCAGCACAATGATAGATATAATAGggaagcaaatttttataaagaaaggCGACATCATTATCAGAGATATGGCAGAGAAAATTATGGTAAAGAAGATAGATTTAAAGCGAAAGATCAAACATGCAGTAACGAAGAATGTAATGAATACAAAGAATGTTTCAATGAGGAAACTGGGTTAGATGCAAAAGAAGCAATAGAGAAAAGGCACAATTATCAGCGATATAATGCATTCAAGGAACATTACAAaggtaattttgaaaataaattggaaattttgaaagagaaagataaaggGAAATTCTATGTgtctgaaaataaagaaaaggagaatgaACATTGGAGAAGTAGaaggaaaattaatgaaagaaataatatttcaaaacgaggacataataaaaaatcacttgttgATAACGATGCAAGTCAGAGAGAAAGATTAGCAGAACAACTGAATAAAGGAGAATTGGAATGCTTAGTGTgttgtgaatatattaaacaGAATGATTATACTTGGTCATGCTCCAATTGCTATCacgtatttcatttaaaatgtattaaaaaatgggcAAACTCATCACAAGCTGAGAATGGTTGGAGATGTCCGGCGTGTCAAAATGTTAGCTCAATAATTCCTGAGGATTACTTTTGCTTTTGTGGGAAAGTGAAAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACATTATCGAAAGATGATTGTCCACATAAATGCACTCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTAACAAAGTATTGTGGCTGTGGTAGAACTCTACAAACAGTACAGTGTAAAACTCACAAATTATTGAAGTGTGATTCTATATGTGGCAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGCCATTATGGAGAATGtgcaaaatgtgaaaaaacaGTAGAGCAAGaatgccattgtgggaaattttcaaatgtattaaCTTGTGAGAGTTATATTCCACCTGCATATGCTTGTGATGCTGTTTGTGAGAAATTGTTGGAATGTGGTAATCatgtttgtacaaaattatgtcATCCAGGGGCTTGCGAACCTTGCTCTTTGACTCCTGGAAAAATTACAACTTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAAtatgttcgaaaaatttaaattgtggACCACCTGATAACCCTCATAATTGTAAAGTAAAATGTCACGTAGGAGATTGTTCTGTTTGCGATTTAACCACCAATGTTAAGTGTCGTTGTGGAAACATGGACAAAGAAATAGCTTGTAAAGATTTGGTATCAAAAGCTGATGTACGATGTGAAAAGAAATGTTCAAAGAAAAAATCTTGCGGCAAACACAAATGTAATAAACGATGTTGTATAGAAACAGAACATGCTTGTCCAGTAATCTGTCCAAAAACACTAAGCTGTGGAAAGCATCAGTGCGAACGAAATTGTCATAaagGAAGATGTCAACCGTGTTGGCGAACTAGTTTTTACGAATTACGCTGCGAATGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAACAAGAAGACCTACGTGTGACAAACCATGCTCTCGTCAGCATTCTTGTGGCCACGAAGTATTGCATAATTGCCATAGTGAACCAAATTGTCCACCTTGCACTGTTCTTACTCAAAGATGGTGTCACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTATGTTGACGAAATTTCATGTGGCTTACCTTGTAACAAGCCCATATCTTGCGGCCGGCATAAATGTATTACTACTTGTCATTCCGGACCATGTGAGAAACCGGGCCAACAGTGTACTCAACCTTGCACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGTCACGAGGGTAAATGTCCAGATACACCTTGCAAGGAAATGGTTAAGGTGACGTGTCAGTGTGGGCATAGGGCCATGTCACGTGTTTGTGCCGAAAATTCCAAAGAATATCAAAGAATAGCAAGTAGTATATTAGCCAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTGTTTGGCCAAGGAGTGAAGAAGCAGaatcaattaaaaactttAGAGTGCAAcgatgaatgtaaaataatagaacGAAATAGAAGATTAGCGTTGGGTTTGCAAATTGTAAATCCAGATTTGAGTGGCAAATTAATGCCTAGATACAGTGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTGCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCCAAGCAAAAATCACGCAGCTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGTCAAGCATATGATCAAGAGCCAAAAAGGAATGTTGTTGCGACTGCTGTTAAAGATAAgtgTTGGTTACCTAGCTATAGTTTATTAGAAATTGTGCAACGGGAGAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAACCTGATGGATCTGTAAAGACAATATTATCACTGCCtgcgaagaaatttcaaaaatcagaaACGCCATCAACCATAAAAACATCAGAACCagaaatagattattttgattataaagGCTAA
Protein Sequence: MATWDGSHLGPDDEDYYQMYADQNAPGPASRNWALFSDNMSHNYLQPKHEFYVQNERMFEQNRPSTFYHSNVNVMPNLMATTASYEYVTNPMNTHALNSHEYYPHVVKPEQCYLSDVPWNCDNDLADRDKYDRTKRMKEPLDNITSHSQLHVMAEEFVPNNREYDDRSKNNELQNVKCINDTNSCAQDSNKISGKYFAYNTNRHDKKYNSKKSPNGKHKERQCYKEDQCYKKCAYANYCQQHVKAHKLQGNKYFINKHYSGNSQVKSKYTNENASDERPTNNDVACSSKEDCATNSNNGESSSNVKTISNRNKNLSSKNSNERIVIGDNNVQDNNVQDSSNVQDNNVQESNNLVKEFTYYNSGLKQTYNNHRNVRRYQHNDRYNREANFYKERRHHYQRYGRENYGKEDRFKAKDQTCSNEECNEYKECFNEETGLDAKEAIEKRHNYQRYNAFKEHYKGNFENKLEILKEKDKGKFYVSENKEKENEHWRSRRKINERNNISKRGHNKKSLVDNDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWANSSQAENGWRCPACQNVSSIIPEDYFCFCGKVKAPEWNRRDIAHSCGEVCGRTLSKDDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECAKCEKTVEQECHCGKFSNVLTCESYIPPAYACDAVCEKLLECGNHVCTKLCHPGACEPCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGPPDNPHNCKVKCHVGDCSVCDLTTNVKCRCGNMDKEIACKDLVSKADVRCEKKCSKKKSCGKHKCNKRCCIETEHACPVICPKTLSCGKHQCERNCHKGRCQPCWRTSFYELRCECGASVVYPPVPCGTRRPTCDKPCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCHGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHSGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRAMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLECNDECKIIERNRRLALGLQIVNPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKPDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_01419343; iTF_01418699; iTF_01419988; iTF_01420630; iTF_01421245;
80% Identity: -