Basic Information

Insect: Tetragonula mellipes
Gene Symbol: stc_1
Assembly: GCA_011634685.1
Location: WINE01004898.1:5872-10893[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2 5.1e+04 -5.3 2.3 3 8 397 402 397 402 0.84

2 16 2 5.1e+04 -4.4 1.6 15 19 581 585 580 585 0.81

3 16 0.086 2.2e+03 0.3 0.4 4 10 614 620 613 620 0.95

4 16 2.7e-05 0.67 11.5 14.9 4 19 631 646 629 646 0.93

5 16 4.9e-08 0.0012 20.2 12.3 1 18 682 699 682 700 0.97

6 16 0.38 9.6e+03 -1.8 1.2 8 13 705 710 704 711 0.81

7 16 1.7e-09 4.2e-05 24.9 13.1 1 19 738 756 738 756 0.98

8 16 2.2e-06 0.055 14.9 11.6 4 18 803 817 796 818 0.86

9 16 1.6 4.1e+04 -3.8 2.0 5 10 846 851 846 851 0.93

10 16 0.0077 1.9e+02 3.6 9.1 1 11 857 867 857 868 0.96

11 16 0.081 2e+03 0.3 1.1 4 10 872 878 871 878 0.92

12 16 1.1e-08 0.00028 22.3 13.6 1 19 884 902 884 902 0.98

13 16 0.63 1.6e+04 -2.5 0.7 5 10 930 935 930 936 0.88

14 16 2 5.1e+04 -4.9 9.8 10 19 949 959 938 959 0.79

15 16 1e-06 0.026 16.0 14.9 1 16 995 1010 995 1021 0.85

16 16 8.2e-06 0.21 13.1 13.6 1 19 1027 1046 1027 1046 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2	5.1e+04	-5.3	2.3	3	8	397	402	397	402	0.84
2	16	2	5.1e+04	-4.4	1.6	15	19	581	585	580	585	0.81
3	16	0.086	2.2e+03	0.3	0.4	4	10	614	620	613	620	0.95
4	16	2.7e-05	0.67	11.5	14.9	4	19	631	646	629	646	0.93
5	16	4.9e-08	0.0012	20.2	12.3	1	18	682	699	682	700	0.97
6	16	0.38	9.6e+03	-1.8	1.2	8	13	705	710	704	711	0.81
7	16	1.7e-09	4.2e-05	24.9	13.1	1	19	738	756	738	756	0.98
8	16	2.2e-06	0.055	14.9	11.6	4	18	803	817	796	818	0.86
9	16	1.6	4.1e+04	-3.8	2.0	5	10	846	851	846	851	0.93
10	16	0.0077	1.9e+02	3.6	9.1	1	11	857	867	857	868	0.96
11	16	0.081	2e+03	0.3	1.1	4	10	872	878	871	878	0.92
12	16	1.1e-08	0.00028	22.3	13.6	1	19	884	902	884	902	0.98
13	16	0.63	1.6e+04	-2.5	0.7	5	10	930	935	930	936	0.88
14	16	2	5.1e+04	-4.9	9.8	10	19	949	959	938	959	0.79
15	16	1e-06	0.026	16.0	14.9	1	16	995	1010	995	1021	0.85
16	16	8.2e-06	0.21	13.1	13.6	1	19	1027	1046	1027	1046	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTCATTTGGGGCCGGATGACGAAGACTATTACCAAATGTATGCCGATCAGAATGCACCCGGGCCTGCATCAAGAAATTGGGCATTATTCTCTGATAATATGAGTCACGATTACTTACGACCCAAACACGAGTTCTATGTACAAAATGAACGCATGTTTGAACAGAATAACAGACCAAGTACGTTCTATCATTCGAACGTGAATGTCGTGCCAAACTTGATGGCCGCGACCGCTAGTTATGAGTACGTAACGAATCCAATGAATACGCATGCATTGAACAGTCACGAGTACTATCCGCATGTTGTTAAACCCGAACAATGCTATCTGTCTGACGATGTTCCTTGGAATTGCGATAATAACGACGTGACAGACAACAAAGACAAGTATGATGGTACGAAAAGAATCAAAGAACCTTTGGACAGTATAATGAGTCGCTCAAAATTACACGTTATGGCTGAGGAGTTTGTGCCAAATAATAGAGAGTACGACGACAGGAGCAAAAATAACGAATCGCAGAACGTAAAATGTGTTAGCAATACAAATTCTTGCGTCCAGGATAGTAACAGGATATCGGGTAAATATTTTGCTTGCAACATGAACAGGCacgataaaaaatacaatagcaAAAAGAGTCCCAATGGCAAACACAAAGAAAGACAGTGTTACAAAGAAGACCAGTGTTACAAGAAGTACCCATATGCAAATTACTATCAGCAACATGTCAGAGCTCATAAGCTTCAAGGTAATAAGTACTTTATTAATAAGCATTATTCGGGGAACTCTCAAGTAAAATCGAAGTATGCAAACGAGAATGCATCGGATGAACGTCCGATGAATAATGATGTTGCTTGTAATAGCAAAGAAGATCGTGCGACAAATTCGAATAATGGAGAATCGTCTTTAAAtgtgaaaacaatttcaaatagaaataaaaatttatcaaataagaataatgatgaaagaattattattggtGATAATAACGTACAGGATAATAATGTGCAGGATAGTAACGTACAGGATAATAACGTACAGGAATCCAATAATCTAGTTAAAGAATTTACTTACTATAACTCGGGATTAAAACAAACCTACAATAATCATAGAAATGCGAGGAGATATCAGTACAATGATAGATACAATAgggaagcaaatttttataaagaaaggCGACATCATTGTCAGAGATACGGCAGAGAAAATTATGCTAAAGAAGATAGATTTAAAGCGAAAGATCAAACATGCAGCAAAGAAGAATGCAATGAATACAAAGAATGTTTCAATGAGGAACTTACTGGGTTAGATGCGAAAGAAGCAATAGAGAAAAGGCACAATTATCAGCGATATAATGCATTTAAGGAACATTACAAAggcaattttgaaaataaattggaaattttgaaagagaaagataaagggaaattttatgtatctgaaaataaagaaaaggagaacgaaCATTGGAGAAGTAGaaggaaaattaatgaaagaaataatattccaaaacgaggacataataaaaaatcacttgTTGATAACGATGCAAGTCAGAGAGAAAGACTAGCAGAACAATTGAATAAAGGAGAATTGGAATGCTTAGTGTGTTGTGAATATATTAAACAGAATGATTATACTTGGTCATGCTCCAATTGCTATCacgtgtttcatttaaaatgtattaaaaaatgggCAAACTCGTCACAAGCTGAGAATGGTTGGAGATGTCCGGCTTGTCAAAATGTTAGCTCAATAATTCCTGAGGATTACTTTTGCTTTTGTGGGAAAGTGAAAGCACCTGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACATTATCGAAAGATGATTGTCCACATAAATGCACTCTTTTGTGTCATCCAGGATCTTGTCCACAATGTACAGCAATGGTAACAAAGTATTGTGGTTGTGGTAGAACTCTACAAACAGTACAGTGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGGCAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGCCATTATGGAGAATGtgcaaaatgtgaaaaatcagTAGACCAagtatgcCATTgtgggaaattttcaaatgtattaaCTTGTGAGAGTTATATTCCACCTGCATATGCTTGTGAGGTTGTTTGTGAGAAATTGTTGGAATGTGGTAATCATgcttgtacaaaattatgtCATCCAGGGGCTTGCGAACCTTGCTCTTTGACTCCTGGAAAAATTACAACCTGTTGCTGTGGACAAACACCATTACCAGATAAAAGACAAACTTGTTTAGATCCAATTCCTGTCTGTGACCAAAtatgttcgaaaaatttaaattgtggACAACCTGATAACCCTCATAAGTGTAAAGTAAAATGTCACGTAGGAGATTGTCCCGTTTGCGATTTAACCACCATTGTTAAGTGTCGTTGTGGAAACATGGATAAAGAAATAGCTTGTAAAGATTTGGTATCAAAAGCTGATGTACGATGtgaaaagaaatgttcaaagAAAAAATCTTGCGGCAAACACAAATGTAATAAACGATGTTGTATAGAAACCGAACATACTTGTCCAGTAATCTGTCCAAAAACGCTAAGCTGTGGAAAGCATCAGTGCGAACGAAATTGTCATAAAGGAAGATGTAAACCTTGTTGGCGAACTAGCTTTTACGAATTACGCTGCGAATGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAACAAGAAGACCTACGTGTGACAAACCATGCTCTCGTCAGCATTCTTGCGGCCACGAAGTATTGCATAATTGCCATAGCGAATCAAATTGTCCACCTTGCACTGTTCTTACTCAAAGATGGTGTTACGGCAAGCACGAGTTACGTAAAGCTGTACCATGTTACGTTGACGAAATTTCATGTGGCTTACCTTGTAACAAGCCCATATCTTGTGGACGGCATAAATGTATTACTACTTGTCATCCCGGACCATGTGAGAAACCGGGCCAACAGTGTACTCAACCTTGTACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACGAGGGTAAATGTCCAGACACACCTTGCAAGGAAATGGTTAAGGTGACGTGTCAGTGTGGGCATAGGACCATGTCACGTGTTTGTGCcgaaaattccaaagaatatCAAAGAATAGCAAGTAGTATATTAGCTAGTAAAATGGCTGATATGCAATTAGGTCATTCCTTTAATTTGGAAGAAGTGTTTGGCCAAGGAGTGAAGAAGCAGAATCAATTAAAAACTTTAGAATGCAATgatgaatgtaaaataatagaaCGAAATAGAAGATTAGCGTTGGGTTTGCAAATTGCTAATCCGGATTTAAGTGGAAAATTAATGCCTAGATATAGTGATTTTATGAAACAGTGGGCTAAAAAGGATCCGCATTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAACTAGCAAAGACCTCTAAGCAAAAATCACGCAGCTATTCCTTTGATAGTATGAATAAAGATAAACGTCATTTTATTCATGAATCTTGTGAACATTTCGGTTGTGAAAGCCAAGCATATGATCAAGAGCCAAAAAGGAATGTTGTTGCGACTGCTGTCAAAGACAagtGTTGGTTACCTAGCTATAGTTTATTGGAAATTGTGCAACGGGAGAATGGTCAGAGAAAAGTTCCAGGTCCAATGTTAAATACTACAAAATCTGATGGATCTGTAAAGACAATATTATCACTGtctgcgaagaaatttcaaaaatcagaaACGCCATCAACCATAAAAACATCAGAACCAGAAatagattattttgattataaaggCTAA
Protein Sequence: MATWDGSHLGPDDEDYYQMYADQNAPGPASRNWALFSDNMSHDYLRPKHEFYVQNERMFEQNNRPSTFYHSNVNVVPNLMAATASYEYVTNPMNTHALNSHEYYPHVVKPEQCYLSDDVPWNCDNNDVTDNKDKYDGTKRIKEPLDSIMSRSKLHVMAEEFVPNNREYDDRSKNNESQNVKCVSNTNSCVQDSNRISGKYFACNMNRHDKKYNSKKSPNGKHKERQCYKEDQCYKKYPYANYYQQHVRAHKLQGNKYFINKHYSGNSQVKSKYANENASDERPMNNDVACNSKEDRATNSNNGESSLNVKTISNRNKNLSNKNNDERIIIGDNNVQDNNVQDSNVQDNNVQESNNLVKEFTYYNSGLKQTYNNHRNARRYQYNDRYNREANFYKERRHHCQRYGRENYAKEDRFKAKDQTCSKEECNEYKECFNEELTGLDAKEAIEKRHNYQRYNAFKEHYKGNFENKLEILKEKDKGKFYVSENKEKENEHWRSRRKINERNNIPKRGHNKKSLVDNDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWANSSQAENGWRCPACQNVSSIIPEDYFCFCGKVKAPEWNRRDIAHSCGEVCGRTLSKDDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECAKCEKSVDQVCHCGKFSNVLTCESYIPPAYACEVVCEKLLECGNHACTKLCHPGACEPCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGQPDNPHKCKVKCHVGDCPVCDLTTIVKCRCGNMDKEIACKDLVSKADVRCEKKCSKKKSCGKHKCNKRCCIETEHTCPVICPKTLSCGKHQCERNCHKGRCKPCWRTSFYELRCECGASVVYPPVPCGTRRPTCDKPCSRQHSCGHEVLHNCHSESNCPPCTVLTQRWCYGKHELRKAVPCYVDEISCGLPCNKPISCGRHKCITTCHPGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLECNDECKIIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPGPMLNTTKSDGSVKTILSLSAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00874142;
80% Identity: -