Basic Information

Insect: Tetragonula clypearis
Gene Symbol: stc
Assembly: GCA_010645135.1
Location: WIUT01012130.1:2324-7261[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2 3.2e+04 -4.4 1.6 15 19 568 572 567 572 0.81

2 15 0.085 1.3e+03 0.3 0.4 4 10 601 607 600 607 0.95

3 15 2.6e-05 0.41 11.5 14.9 4 19 618 633 616 633 0.93

4 15 4e-08 0.00064 20.5 12.9 1 18 669 686 669 687 0.97

5 15 0.31 4.8e+03 -1.5 1.2 8 13 692 697 691 698 0.81

6 15 1.7e-09 2.6e-05 24.9 13.1 1 19 725 743 725 743 0.98

7 15 1.9e-06 0.03 15.1 11.4 4 18 790 804 783 805 0.86

8 15 1.6 2.5e+04 -3.8 2.0 5 10 833 838 833 838 0.93

9 15 0.0056 89 4.0 9.2 1 11 844 854 844 855 0.95

10 15 0.08 1.3e+03 0.4 1.1 4 10 859 865 858 865 0.92

11 15 2.6e-08 0.00041 21.1 13.0 1 19 871 889 871 889 0.98

12 15 0.62 9.8e+03 -2.5 0.7 5 10 917 922 917 923 0.88

13 15 2 3.2e+04 -6.3 10.6 10 19 936 946 925 946 0.76

14 15 9.4e-07 0.015 16.1 14.8 1 16 982 997 982 1008 0.85

15 15 8.1e-06 0.13 13.1 13.6 1 19 1014 1033 1014 1033 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2	3.2e+04	-4.4	1.6	15	19	568	572	567	572	0.81
2	15	0.085	1.3e+03	0.3	0.4	4	10	601	607	600	607	0.95
3	15	2.6e-05	0.41	11.5	14.9	4	19	618	633	616	633	0.93
4	15	4e-08	0.00064	20.5	12.9	1	18	669	686	669	687	0.97
5	15	0.31	4.8e+03	-1.5	1.2	8	13	692	697	691	698	0.81
6	15	1.7e-09	2.6e-05	24.9	13.1	1	19	725	743	725	743	0.98
7	15	1.9e-06	0.03	15.1	11.4	4	18	790	804	783	805	0.86
8	15	1.6	2.5e+04	-3.8	2.0	5	10	833	838	833	838	0.93
9	15	0.0056	89	4.0	9.2	1	11	844	854	844	855	0.95
10	15	0.08	1.3e+03	0.4	1.1	4	10	859	865	858	865	0.92
11	15	2.6e-08	0.00041	21.1	13.0	1	19	871	889	871	889	0.98
12	15	0.62	9.8e+03	-2.5	0.7	5	10	917	922	917	923	0.88
13	15	2	3.2e+04	-6.3	10.6	10	19	936	946	925	946	0.76
14	15	9.4e-07	0.015	16.1	14.8	1	16	982	997	982	1008	0.85
15	15	8.1e-06	0.13	13.1	13.6	1	19	1014	1033	1014	1033	0.97

Sequence Information

Coding Sequence: ATGGCCACATGGGACGGTTCTCATTTGGGACCGGATGACGATGACTATTACCAAGTGTATGCCGATCAGAACGCACCCGGGCCTGCATCGAGGAACTGGGCGTTATTCTCTGATAATATGAGTCACGATTATCTACAACCCAAACACGAGTTCTACGTACAAAACGAACGCATGTTTGAACAGAACAGACCGAGTACCTTCTATCATTCGAACGTGAATGTCGTGCCAAGCTTGATGGCCGCGACCGCTAGCTATGAGTATGTAACGAATCCGATGAACACGCATGCATTGAACAGTCACGAGTACTATCCGCATGTTGTTAAGCCCGAACAATGCTATTTGTCTGACGTTCCTTGGAATTGTGACAATGACACGGCGGACAGCAAGGACAAGTATGATCGTACGAAAAGAATCAAAGAACCATTGGACAGTATAATGAGTCAGTCAAAATTACACGTCATGGCCGAGGAGTTTGTGCCAAATAACAGAGAGTACGACGATAGATGCAAAAATAACGCAGAATCACAGAACGTAAAATGCGTTAACAGTACAAATTCTTGCGTCCAGGATAGTAACAAGATGATATCGGGTAAATATTTCGCTTGCAACGCGAACAGGCATGATAAAAAGTACAACAGCAAGAAGAGTCCCAATGGTAAACACAAAGAAGACCAGTGTTACAAGAAGTACGCGTACGCAAATTACTGTCAGCAGCATGTCAGAGCGCATAAGCTTCAAGGGAATAAGTACTTTATTAATAAGCATTATTCCGGCAACTCTCAAGTAAAATCAAAGTATGCAAATGAGAATGCATCGGACGAACGTCCAATGAGTAATGATGTTGCTTCTAATAGTAAAGATGATTGTGCGACAAATTCGAATAACGGAGAATCGTCTTTGAGtgtaaaaacaatttcaagtagaaatagaaatttatcaaataagaataataatgaaagaattattaccGGTGATAATAACGTACAGGATAGTAATGCGCAGGATAATAACGTACAGGAATCTGATAATCTAGTTAAAGAATTTACTTGCTATAACTCGGGATTAAAACAAACCTACAATAATCATAGAAATGTGAGGAGATATCAGTACAATGATAGATATAATAGggaagcaaatttttataaagaaaggCGACATCATTATCAGAGATACGGCAGAGAAAATTATGGTAAAGAAGATAGATTTAAAGCGAACGATCAAACGTGCAGTAAAGAAGAATGTAACGAATACAAAGAATGCTTCAACGAGGAAACTGGGTTAGATGCAAAAGAAGCAACGGAGAAAAGGCACAATTATCAGCGATATAATGCATTTAAGGAACGTTACAAaggtaattttgaaaataaattggaaactttaaaagagaaagataaaggGAGATTTTATGCatgtgaaaataaagaaaaggagaacgaACATTGGAGAAGTAgaaggaaaattaatgaaagaaataatattccaaaACGAggacataataaaaaatcactTGTCGATAACGATGCAAGTCAGAGAGAAAGACTGGCAGAACAATTGAATAAAGGAGAATTGGAATGCTTAGTGTGTtgtgaatatattaaacaGAATGATTATACTTGGTCATGCTCCAATTGCTATCAcgtgtttcatttgaaatgtattaaaaaatgggCAAACTCGTCACAAGCTGACAATGGTTGGAGATGTCCGGCTTGTCAAAATGTTAGCTCAATAATTCCTGAGGATTACTTTTGCTTTTGTGGGAAAGTGAAAGCACCCGAATGGAATCGTAGAGATATTGCACATTCTTGCGGCGAAGTTTGTGGTAGAACATTGTCGAAAGATGATTGCCCACATAAATGCACTCTTTTGTGTCATCCAGGATCTTGTCCACAGTGTACGGCAATGGTAACAAAGTATTGCGGTTGTGGTAGAACTCTACAAACAGTACAGTGTAAAACTCATAAATTATTGAAGTGTGATTCTATATGTGGCAAAGATTTAAATTGTGGTAGACACAAATGTCAAAGTAAATGCCATTATGGAGAATGtgaaaactgtgaaaaatttgtaaaccaagtATGCCAttgtgggaaatttgaaaatatattaaattgtgaGAGTTATATTCCACCTCCATATGCCTGTGAGGTTGTTTGTGAGAAATTGTTGGAATGTGGTAATCACgcttgtacaaaattatgtCATCCAGGGGCTTGCGAACCTTGCTCCTTGACTCCTGGAAAAATTACAACCTGTTGCTGTGGACAAACACCATTGCCAGATAAAAGACAAACTTGCTTAGATCCAATTCCTGTCTGCGACCAGatatgttcgaaaaatttaaattgtggACAACCTGATGACCCTCATAAGTGTAAAGTAAAATGTCACGTAGGAGATTGTCCTGTTTGCGATTTAACCACCAATGTTAAGTGTCGTTGTGGAAACATGGATAAAGAAATAGCTTGTAAAGACTTGGCGTCGAAAGCTGATGTACGATGTGAAAAGAAATgttcaaagaaaaaatcttGCGGCAAACACAAATGTAATAAACGATGTTGCGTAGAAACGGAACATACTTGTCCAGTAATCTGTCCAAAAACGCTAAACTGTGGAAAGCATCAGTGCGACCGAAATTGTCACAAAGGAAGATGTAAACCCTGTTGGCGAACTAGTTTCTACGAATTACGCTGCGAGTGCGGAGCTTCTGTGGTGTATCCTCCTGTTCCTTGTGGAACAAGAAGACCTACCTGTGACAAGCCATGCTCTCGTCAGCATTCTTGTGGCCACGAAGTGTTGCATAATTGCCATAGTGAACCGAATTGTCCACCTTGCACTGTTCTTACTCAAAGATGGTGTTACGGCAAGCACGAGCTACGTAAAGCTGTACCGTGTTACGTTGACGAGATTTCATGTGGCTTGCCTTGTAACAAGCCCGTATCTTGTGGACGGCATAAATGTATTACCACTTGTCATCCCGGACCGTGTGAGAAACCGGGCCAACAGTGTACTCAACCTTGTACCGTTCAAAGAGAAATGTGTGGACATATCTGTGCTGCCCCGTGCCACGAGGGTAAATGTCCAGACACACCTTGCAAGGAAATGGTTAAGgtgACGTGTCAGTGTGGGCATAGGACCATGTCACGTGTTTGTGCCGAAAATTCCAAAGAGTATCAAAGAATAGCGAGTAGTATACTAGCCAGTAAAATGGCTGACATGCAGTTAGGCCATTCGTTTAATTTGGAAGAAGTGTTTGGCCAAGGTGTGAAGAAGCAGAATCAATTGAAAACTTTAGAATGCAATGACGAGTGTAAAATGATAGAACGAAATAGAAGATTAGCGCTGGGTTTGCAAATTGCTAATCCGGATTTAAGTGGGAAATTAATGCCTAGATATAGTGACTTTATGAAACAGTGGGCTAAAAAGGATCCGCACTTTTGCCAAATGGTCCACGAGAAATTAACGGAATTAGTTCAGCTGGCAAAGACGTCTAAGCAAAAGTCACGCAGTTATTCCTTTGACAGTATGAATAAAGATAAACGTCATTTTATTCACGAATCTTGTGAACATTTCGGTTGTGAGAGTCAAGCGTATGATCAAGAGCCAAAAAGGAATGTTGTTGCGACTGCTGTCAAAGACAAGtgTTGGTTACCTAGCTATAGTTTATTGGAAATCGTGCAACGGGAGAATGGTCAGAGAAAAGTTCCACGTCCAATGTTAAATACTACAAAACCTGATGGATCTGTAAAGACAATATTATCACTGCctgcgaagaaatttcaaaaatcagaAACGCCGTCAACCATAAAAACGTCAGAACCAGAAAtagattattttgattataaaGGCTAA
Protein Sequence: MATWDGSHLGPDDDDYYQVYADQNAPGPASRNWALFSDNMSHDYLQPKHEFYVQNERMFEQNRPSTFYHSNVNVVPSLMAATASYEYVTNPMNTHALNSHEYYPHVVKPEQCYLSDVPWNCDNDTADSKDKYDRTKRIKEPLDSIMSQSKLHVMAEEFVPNNREYDDRCKNNAESQNVKCVNSTNSCVQDSNKMISGKYFACNANRHDKKYNSKKSPNGKHKEDQCYKKYAYANYCQQHVRAHKLQGNKYFINKHYSGNSQVKSKYANENASDERPMSNDVASNSKDDCATNSNNGESSLSVKTISSRNRNLSNKNNNERIITGDNNVQDSNAQDNNVQESDNLVKEFTCYNSGLKQTYNNHRNVRRYQYNDRYNREANFYKERRHHYQRYGRENYGKEDRFKANDQTCSKEECNEYKECFNEETGLDAKEATEKRHNYQRYNAFKERYKGNFENKLETLKEKDKGRFYACENKEKENEHWRSRRKINERNNIPKRGHNKKSLVDNDASQRERLAEQLNKGELECLVCCEYIKQNDYTWSCSNCYHVFHLKCIKKWANSSQADNGWRCPACQNVSSIIPEDYFCFCGKVKAPEWNRRDIAHSCGEVCGRTLSKDDCPHKCTLLCHPGSCPQCTAMVTKYCGCGRTLQTVQCKTHKLLKCDSICGKDLNCGRHKCQSKCHYGECENCEKFVNQVCHCGKFENILNCESYIPPPYACEVVCEKLLECGNHACTKLCHPGACEPCSLTPGKITTCCCGQTPLPDKRQTCLDPIPVCDQICSKNLNCGQPDDPHKCKVKCHVGDCPVCDLTTNVKCRCGNMDKEIACKDLASKADVRCEKKCSKKKSCGKHKCNKRCCVETEHTCPVICPKTLNCGKHQCDRNCHKGRCKPCWRTSFYELRCECGASVVYPPVPCGTRRPTCDKPCSRQHSCGHEVLHNCHSEPNCPPCTVLTQRWCYGKHELRKAVPCYVDEISCGLPCNKPVSCGRHKCITTCHPGPCEKPGQQCTQPCTVQREMCGHICAAPCHEGKCPDTPCKEMVKVTCQCGHRTMSRVCAENSKEYQRIASSILASKMADMQLGHSFNLEEVFGQGVKKQNQLKTLECNDECKMIERNRRLALGLQIANPDLSGKLMPRYSDFMKQWAKKDPHFCQMVHEKLTELVQLAKTSKQKSRSYSFDSMNKDKRHFIHESCEHFGCESQAYDQEPKRNVVATAVKDKCWLPSYSLLEIVQRENGQRKVPRPMLNTTKPDGSVKTILSLPAKKFQKSETPSTIKTSEPEIDYFDYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01418699;
90% Identity: iTF_00874142;
80% Identity: -